Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0288
(440 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC006350-1|AAH06350.1| 619|Homo sapiens BUD13 homolog (S. cerev... 31 1.8
X70872-1|CAA50220.1| 469|Homo sapiens properdin protein. 29 7.1
X57748-1|CAA40914.1| 469|Homo sapiens properdin protein. 29 7.1
M83652-1|AAA36489.1| 469|Homo sapiens complement omponent prope... 29 7.1
BC015756-1|AAH15756.1| 469|Homo sapiens complement factor prope... 29 7.1
AY297813-1|AAP43692.1| 469|Homo sapiens properdin P factor, com... 29 7.1
AL009172-3|CAA15658.1| 454|Homo sapiens complement factor prope... 29 7.1
AF005668-1|AAB62886.1| 469|Homo sapiens properdin protein. 29 7.1
AF005666-1|AAC51626.1| 469|Homo sapiens properdin protein. 29 7.1
AF005665-1|AAB63280.1| 469|Homo sapiens properdin protein. 29 7.1
AL135842-3|CAI23350.1| 118|Homo sapiens late cornified envelope... 29 9.4
>BC006350-1|AAH06350.1| 619|Homo sapiens BUD13 homolog (S.
cerevisiae) protein.
Length = 619
Score = 31.1 bits (67), Expect = 1.8
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = -2
Query: 403 AGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSR 269
+G S R +HD+ PS PR+ R S+D S PR PD R
Sbjct: 211 SGASPRRVRHDSPDPSP-PRRARHGSSDISSPRRVHNNSPDTSRR 254
>X70872-1|CAA50220.1| 469|Homo sapiens properdin protein.
Length = 469
Score = 29.1 bits (62), Expect = 7.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 39 GRWCEAPSAGLCLTPLRPNQPSRIRQ 116
G W E + GLC+ P PN P+R RQ
Sbjct: 380 GSWSEWSTWGLCMPPCGPN-PTRARQ 404
>X57748-1|CAA40914.1| 469|Homo sapiens properdin protein.
Length = 469
Score = 29.1 bits (62), Expect = 7.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 39 GRWCEAPSAGLCLTPLRPNQPSRIRQ 116
G W E + GLC+ P PN P+R RQ
Sbjct: 380 GSWSEWSTWGLCMPPCGPN-PTRARQ 404
>M83652-1|AAA36489.1| 469|Homo sapiens complement omponent
properdin protein.
Length = 469
Score = 29.1 bits (62), Expect = 7.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 39 GRWCEAPSAGLCLTPLRPNQPSRIRQ 116
G W E + GLC+ P PN P+R RQ
Sbjct: 380 GSWSEWSTWGLCMPPCGPN-PTRARQ 404
>BC015756-1|AAH15756.1| 469|Homo sapiens complement factor
properdin protein.
Length = 469
Score = 29.1 bits (62), Expect = 7.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 39 GRWCEAPSAGLCLTPLRPNQPSRIRQ 116
G W E + GLC+ P PN P+R RQ
Sbjct: 380 GSWSEWSTWGLCMPPCGPN-PTRARQ 404
>AY297813-1|AAP43692.1| 469|Homo sapiens properdin P factor,
complement protein.
Length = 469
Score = 29.1 bits (62), Expect = 7.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 39 GRWCEAPSAGLCLTPLRPNQPSRIRQ 116
G W E + GLC+ P PN P+R RQ
Sbjct: 380 GSWSEWSTWGLCMPPCGPN-PTRARQ 404
>AL009172-3|CAA15658.1| 454|Homo sapiens complement factor
properdin protein.
Length = 454
Score = 29.1 bits (62), Expect = 7.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 39 GRWCEAPSAGLCLTPLRPNQPSRIRQ 116
G W E + GLC+ P PN P+R RQ
Sbjct: 365 GSWSEWSTWGLCMPPCGPN-PTRARQ 389
>AF005668-1|AAB62886.1| 469|Homo sapiens properdin protein.
Length = 469
Score = 29.1 bits (62), Expect = 7.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 39 GRWCEAPSAGLCLTPLRPNQPSRIRQ 116
G W E + GLC+ P PN P+R RQ
Sbjct: 380 GSWSEWSTWGLCMPPCGPN-PTRARQ 404
>AF005666-1|AAC51626.1| 469|Homo sapiens properdin protein.
Length = 469
Score = 29.1 bits (62), Expect = 7.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 39 GRWCEAPSAGLCLTPLRPNQPSRIRQ 116
G W E + GLC+ P PN P+R RQ
Sbjct: 380 GSWSEWSTWGLCMPPCGPN-PTRARQ 404
>AF005665-1|AAB63280.1| 469|Homo sapiens properdin protein.
Length = 469
Score = 29.1 bits (62), Expect = 7.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 39 GRWCEAPSAGLCLTPLRPNQPSRIRQ 116
G W E + GLC+ P PN P+R RQ
Sbjct: 380 GSWSEWSTWGLCMPPCGPN-PTRARQ 404
>AL135842-3|CAI23350.1| 118|Homo sapiens late cornified envelope 5A
protein.
Length = 118
Score = 28.7 bits (61), Expect = 9.4
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +3
Query: 24 CTRPSGRWCEAPSAGLCLTPLRPNQPSRIR-QGYAHCGA 137
C SG C + G CL+ RP Q R R Q + CG+
Sbjct: 52 CGSSSGGCCSSEGGGCCLSHHRPRQSLRRRPQSSSCCGS 90
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,859,460
Number of Sequences: 237096
Number of extensions: 1487096
Number of successful extensions: 4175
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4175
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3602345922
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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