BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-0285 (763 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Triboliu... 25 0.50 DQ659254-1|ABG47452.1| 431|Tribolium castaneum imaginal disc gr... 23 2.7 AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 22 4.6 AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 22 4.6 AM712905-1|CAN84644.1| 102|Tribolium castaneum hypothetical pro... 22 6.1 AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 21 8.1 >S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Tribolium castaneum homeodomainprotein mRNA, complete cds. ). Length = 327 Score = 25.4 bits (53), Expect = 0.50 Identities = 12/27 (44%), Positives = 14/27 (51%) Frame = -2 Query: 606 REGNDRAVRPEGAKRAARTIRSHRPRT 526 R R V+ GAK+ A T RPRT Sbjct: 207 RSPRTRRVKKPGAKQGAPTAEEKRPRT 233 >DQ659254-1|ABG47452.1| 431|Tribolium castaneum imaginal disc growth factor 4 protein. Length = 431 Score = 23.0 bits (47), Expect = 2.7 Identities = 10/25 (40%), Positives = 15/25 (60%) Frame = -2 Query: 690 RRIVLAIDHERLFEATANLLSKSFG 616 R I+ ++DH F +A L K+FG Sbjct: 115 RTILESVDHRLAFVNSAQALVKNFG 139 >AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase protein. Length = 1464 Score = 22.2 bits (45), Expect = 4.6 Identities = 9/23 (39%), Positives = 13/23 (56%) Frame = -1 Query: 553 DNKEPSTEDKTLTSSGTNFLKDK 485 + K+P +DK LT G N D+ Sbjct: 1052 EEKKPEKKDKVLTFLGANAQDDE 1074 >AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2 protein. Length = 1464 Score = 22.2 bits (45), Expect = 4.6 Identities = 9/23 (39%), Positives = 13/23 (56%) Frame = -1 Query: 553 DNKEPSTEDKTLTSSGTNFLKDK 485 + K+P +DK LT G N D+ Sbjct: 1052 EEKKPEKKDKVLTFLGANAQDDE 1074 >AM712905-1|CAN84644.1| 102|Tribolium castaneum hypothetical protein protein. Length = 102 Score = 21.8 bits (44), Expect = 6.1 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = -1 Query: 748 GHLMVALSRNLTGLYRSRI 692 GHL+ + S L YRSRI Sbjct: 30 GHLLGSSSLPLRSFYRSRI 48 >AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein protein. Length = 392 Score = 21.4 bits (43), Expect = 8.1 Identities = 7/13 (53%), Positives = 8/13 (61%) Frame = -1 Query: 571 CKTCGKDNKEPST 533 C+ CGK PST Sbjct: 252 CRICGKSYARPST 264 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 163,119 Number of Sequences: 336 Number of extensions: 3560 Number of successful extensions: 9 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 9 length of database: 122,585 effective HSP length: 56 effective length of database: 103,769 effective search space used: 20442493 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -