Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0285
         (763 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC032109-1|AAH32109.1|  859|Homo sapiens low density lipoprotein...    35   0.36 
AF166350-1|AAD44360.1|  859|Homo sapiens ST7 protein protein.          35   0.36 
AB208957-1|BAD92194.1|  793|Homo sapiens suppression of tumorige...    35   0.36 
AL590105-5|CAI13016.1|  383|Homo sapiens novel protein protein.        31   4.5  
AK098652-1|BAC05366.1|  383|Homo sapiens protein ( Homo sapiens ...    31   4.5  

>BC032109-1|AAH32109.1|  859|Homo sapiens low density
           lipoprotein-related protein 12 protein.
          Length = 859

 Score = 34.7 bits (76), Expect = 0.36
 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
 Frame = +1

Query: 526 CPRSMAPYCPCRTFCTFRTHCPIVPLP----IWRPKGF**EVRRCLEKSFMVDSQDDPPR 693
           C R+   Y P    C ++ HCP           +P  F  +  RC+ +S++ DSQDD   
Sbjct: 420 CSRNGVCY-PRSDRCNYQNHCPNGSDEKNCFFCQPGNFHCKNNRCVFESWVCDSQDD--- 475

Query: 694 CGSDIDPSDCAIRLPS 741
           CG   D  +C + +P+
Sbjct: 476 CGDGSDEENCPVIVPT 491


>AF166350-1|AAD44360.1|  859|Homo sapiens ST7 protein protein.
          Length = 859

 Score = 34.7 bits (76), Expect = 0.36
 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
 Frame = +1

Query: 526 CPRSMAPYCPCRTFCTFRTHCPIVPLP----IWRPKGF**EVRRCLEKSFMVDSQDDPPR 693
           C R+   Y P    C ++ HCP           +P  F  +  RC+ +S++ DSQDD   
Sbjct: 420 CSRNGVCY-PRSDRCNYQNHCPNGSDEKNCFFCQPGNFHCKNNRCVFESWVCDSQDD--- 475

Query: 694 CGSDIDPSDCAIRLPS 741
           CG   D  +C + +P+
Sbjct: 476 CGDGSDEENCPVIVPT 491


>AB208957-1|BAD92194.1|  793|Homo sapiens suppression of
           tumorigenicity variant protein.
          Length = 793

 Score = 34.7 bits (76), Expect = 0.36
 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
 Frame = +1

Query: 526 CPRSMAPYCPCRTFCTFRTHCPIVPLP----IWRPKGF**EVRRCLEKSFMVDSQDDPPR 693
           C R+   Y P    C ++ HCP           +P  F  +  RC+ +S++ DSQDD   
Sbjct: 354 CSRNGVCY-PRSDRCNYQNHCPNGSDEKNCFFCQPGNFHCKNNRCVFESWVCDSQDD--- 409

Query: 694 CGSDIDPSDCAIRLPS 741
           CG   D  +C + +P+
Sbjct: 410 CGDGSDEENCPVIVPT 425


>AL590105-5|CAI13016.1|  383|Homo sapiens novel protein protein.
          Length = 383

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = +3

Query: 573 LQDALPDRS-PPDMEAQRILIRGSPLPRKVFHGR*PGRSAAMRLRYRPVRL 722
           L D L  R  PP+++A   + +  P PR VF  R P + A  RL  R  R+
Sbjct: 278 LGDQLLTRELPPNLKAALNIEKELPKPRHVFRTRVPRKQALQRLHERKTRI 328


>AK098652-1|BAC05366.1|  383|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25786 fis, clone TST06852. ).
          Length = 383

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = +3

Query: 573 LQDALPDRS-PPDMEAQRILIRGSPLPRKVFHGR*PGRSAAMRLRYRPVRL 722
           L D L  R  PP+++A   + +  P PR VF  R P + A  RL  R  R+
Sbjct: 278 LGDQLLTRELPPNLKAALNIEKELPKPRHVFRTRVPRKQALQRLHERKTRI 328


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,500,694
Number of Sequences: 237096
Number of extensions: 1920857
Number of successful extensions: 3441
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3441
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9144232952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)