Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0285
         (763 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.    23   3.1  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    23   3.1  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   7.1  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   7.1  

>U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.
          Length = 53

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -1

Query: 682 RPGYRP*KTFRGNGEPLIKILW 617
           +PG RP  TF G G    KI W
Sbjct: 28  QPGRRPFPTFPGQGPFNPKIKW 49


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -2

Query: 123 ILGSISNIFGNCTLFF*CEKTIMG 52
           ILGS+  I G C LF   E  I+G
Sbjct: 292 ILGSLVAITGGCFLFRAWESIIVG 315


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 80  KSVQFPKIFEIEPN 121
           K ++FP I+EI PN
Sbjct: 155 KYMKFPAIYEIYPN 168



 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +3

Query: 18  SIIQIFNYSLNDPLSSFRIKKKVYNFQKYSKL 113
           S +Q ++ S+ DP      +K +  F +Y KL
Sbjct: 406 SALQSYSTSMRDPAFYMLYQKILSYFLRYKKL 437


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 80  KSVQFPKIFEIEPN 121
           K ++FP I+EI PN
Sbjct: 155 KYMKFPAIYEIYPN 168


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,948
Number of Sequences: 438
Number of extensions: 3757
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)