Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0284
(576 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC18.14c |rpp0||60S acidic ribosomal protein Rpp0 |Schizosacch... 224 8e-60
SPBC11G11.03 |||60S acidic ribosomal protein |Schizosaccharomyce... 57 2e-09
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 33 0.030
SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1 |Schizosacch... 29 0.49
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 29 0.64
SPAC823.13c |||mitochondrial inner membrane protein|Schizosaccha... 27 1.5
SPAC3H1.04c |mdm31||mitochondrial inner membrane protein Mdm31|S... 27 1.5
SPAC22H12.05c |||fasciclin domain protein |Schizosaccharomyces p... 27 2.0
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 27 2.6
SPAC6B12.04c |||aminotransferase class I and II|Schizosaccharomy... 26 3.4
SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|ch... 26 3.4
SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 26 4.5
SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory sub... 26 4.5
SPAC186.08c |||L-lactate dehydrogenase |Schizosaccharomyces pomb... 25 6.0
SPBC428.17c |||conserved fungal protein|Schizosaccharomyces pomb... 25 6.0
SPBC660.16 |||phosphogluconate dehydrogenase, decarboxylating |S... 25 6.0
SPBC21D10.10 |||bromodomain protein|Schizosaccharomyces pombe|ch... 25 6.0
>SPCC18.14c |rpp0||60S acidic ribosomal protein Rpp0
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 312
Score = 224 bits (547), Expect = 8e-60
Identities = 104/178 (58%), Positives = 137/178 (76%)
Frame = +1
Query: 43 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHL 222
K+ YF K+ L ++Y F+V DNV SQQM +R LRG++ ++MGKNTM+R+A++ +
Sbjct: 8 KAQYFEKLRSLFEKYNSLFVVNIDNVSSQQMHTVRKQLRGTAELIMGKNTMIRRAMRGII 67
Query: 223 DNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTG 402
++ P LE+LLP ++GNVGFVFT DL EVR+ ++ N + APARP AIAPL V +PA NTG
Sbjct: 68 NDMPELERLLPVVRGNVGFVFTNADLKEVRETIIANVIAAPARPNAIAPLDVFVPAGNTG 127
Query: 403 LGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGL 576
+ P KTSFFQAL IPTKI++GTIEI +DVH++ KVG SEATLLNMLNISPF+YG+
Sbjct: 128 MEPGKTSFFQALGIPTKITRGTIEITSDVHLVSKDAKVGPSEATLLNMLNISPFTYGM 185
>SPBC11G11.03 |||60S acidic ribosomal protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 241
Score = 57.2 bits (132), Expect = 2e-09
Identities = 58/199 (29%), Positives = 91/199 (45%), Gaps = 21/199 (10%)
Frame = +1
Query: 43 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI---- 210
K+ F + Q LD + +I N+ + +++IR +GS I MGK +M KA+
Sbjct: 23 KAALFSGVQQSLDSFDYMWIFDVTNMRNTYLKRIRDDWKGSRI-FMGKTKVMAKALGHTP 81
Query: 211 -KDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAP-ARPGAIAPLSVVI 384
++H +N L KLL G VG +FT EV E+ VQ AR GA+AP + VI
Sbjct: 82 EEEHAENVSKLTKLL---HGAVGLLFTNSKPDEVIG-YFESFVQNDFARAGAVAPFTHVI 137
Query: 385 PA----HNTGLGPEKTSFF---------QALSIPTKISKGTIEIINDVHILKPGDKVGAS 525
PA G P + + L +PT + G + ++ D + G ++ +
Sbjct: 138 PAGPVYSRAGQIPVEDDILLTHTLEPQVRQLGMPTVLKNGVVTLLADFPLCTEGQQLDSR 197
Query: 526 EATLLNMLNI--SPFSYGL 576
+ LL + I + F GL
Sbjct: 198 QTRLLKLFGITAAEFKVGL 216
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 33.1 bits (72), Expect = 0.030
Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
Frame = +2
Query: 50 TTSLRSSNSWTSTQNVSSWVPITWARNRCSRSVSRYVAPVSCSWEKTL*CAKPSKTTWTT 229
+T + SSN S+ + P+T S SV PV+ + T C TT T+
Sbjct: 506 STPVTSSNYTISSSTPVTSTPVTTTNCTTSTSVLYTSTPVTSTPLATTNC-----TTSTS 560
Query: 230 IQPSRNCCHTSRATLASCSPAETSLRSVTNCWRTKSRLQL-VPVPLPHCQSS 382
+ + +S T++S +P ++ + TNC + S L P+ P+ SS
Sbjct: 561 VPYTSTPVTSSNYTISSSTPVTSTPVTTTNCTTSTSVLYTSTPITSPNSTSS 612
Score = 31.1 bits (67), Expect = 0.12
Identities = 39/160 (24%), Positives = 64/160 (40%), Gaps = 6/160 (3%)
Frame = +2
Query: 50 TTSLRSSNSWTSTQNVSSWVPITWARNRCSRSVSRYVAPVSCSWEKTL*CAKPSKTTWT- 226
TT+ +S S T + P+T S S+ PV+ + T C + +T
Sbjct: 447 TTNCTTSTSVPYTSTPVTSTPLTTTNCTTSTSIPYTSTPVTSTPLTTTNCTTSTSVPYTS 506
Query: 227 TIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRTKSRLQLVPVPLPHC--QSSFPPT-T 397
T S N +S + S T+ + T+ T + + P+ +C +S P T T
Sbjct: 507 TPVTSSNYTISSSTPVTSTPVTTTNCTTSTSVLYTSTPVTSTPLATTNCTTSTSVPYTST 566
Query: 398 PASVQRKPLSSKL-FPSLP-KFQRVLLKSSTMYTS*SPVT 511
P + +SS S P +S +YTS +P+T
Sbjct: 567 PVTSSNYTISSSTPVTSTPVTTTNCTTSTSVLYTS-TPIT 605
Score = 25.0 bits (52), Expect = 7.9
Identities = 33/151 (21%), Positives = 56/151 (37%), Gaps = 16/151 (10%)
Frame = +2
Query: 2 ATLSRMGREDKALGSLTTSLRSSNSWTSTQN-----------VSSWVPITWARNRCSRSV 148
A+ S G L S +TS +S S T N SS P+T S SV
Sbjct: 374 ASTSSTGTSSSPLLSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSV 433
Query: 149 SRYVAPVSCSWEKTL*CAKPSKTTWTTIQPSRNCCHTSRATLA-----SCSPAETSLRSV 313
PV+ + T C + +T+ + T+ T + + +P ++ +
Sbjct: 434 PYTSTPVTSTPLATTNCTTSTSVPYTSTPVTSTPLTTTNCTTSTSIPYTSTPVTSTPLTT 493
Query: 314 TNCWRTKSRLQLVPVPLPHCQSSFPPTTPAS 406
TNC T + + P+ + +TP +
Sbjct: 494 TNC-TTSTSVPYTSTPVTSSNYTISSSTPVT 523
>SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 297
Score = 29.1 bits (62), Expect = 0.49
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +2
Query: 173 CSWEKTL*CAKPSKTTWTTIQPSRNCCHTSRATLAS 280
CS EKT C++ K+ T+ +PS CC ++T+ +
Sbjct: 264 CSTEKTSCCSQEKKSCCTSEKPS--CCSNGKSTVCA 297
>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 28.7 bits (61), Expect = 0.64
Identities = 35/125 (28%), Positives = 53/125 (42%), Gaps = 6/125 (4%)
Frame = +2
Query: 50 TTSLRSSNSWTSTQNVSSWVPITWARNRCSRSVSRYVAPVSCSWEKTL*CAKP--SKTTW 223
TTS S+++ TST +V+ S +++ V P S S T P S T
Sbjct: 46 TTSFSSASTETSTHSVT------------STNITSIVPPPSTSHNSTTTTVPPTTSMNTT 93
Query: 224 TTIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRTKSRLQLVPV--PLPHCQSS--FPP 391
TT+ P+ TS T + +P T + S T + + V P H ++ PP
Sbjct: 94 TTVPPT-----TSLNTTTTTAPPTTHVNSTTTVVPPTTHVNTTTVVPPTTHVNTTTVVPP 148
Query: 392 TTPAS 406
TT A+
Sbjct: 149 TTHAN 153
>SPAC823.13c |||mitochondrial inner membrane
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 317
Score = 27.5 bits (58), Expect = 1.5
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 239 RAGLLSRWSLMALRIIVFFPMSTILEPR 156
+A W LM + +++F + ILEPR
Sbjct: 162 QASTWGTWGLMGINVVLFVVVQLILEPR 189
>SPAC3H1.04c |mdm31||mitochondrial inner membrane protein
Mdm31|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 27.5 bits (58), Expect = 1.5
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = -2
Query: 317 LSRTSTRSPRVNTKPTLPLMCGNSFSRAGLLSRWSLMALRII 192
L +T +S + PTLP + + S +G+LSR + + ++ I
Sbjct: 35 LKQTVLQSSSFKSFPTLPRLAARNISNSGILSRTTPVIIKQI 76
>SPAC22H12.05c |||fasciclin domain protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 728
Score = 27.1 bits (57), Expect = 2.0
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -2
Query: 479 MISIVPFEILVGMERAWKKEVFSGPRPVLWAGMTTDNGAMAP 354
+IS P + L+G+ AW E S R + T+ +AP
Sbjct: 289 IISFTPAKYLIGIGAAWFSEKLSRERKSISVDKTSKRAILAP 330
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 26.6 bits (56), Expect = 2.6
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +2
Query: 50 TTSLRSSNSWTSTQNVSSWVPITWARNRCSRSVSRYVAPVSCS 178
+T + SS S +ST+ SS+ A + + S S YVAPVS S
Sbjct: 165 STEVASSYSASSTEVTSSYP----ASSEVATSTSSYVAPVSSS 203
>SPAC6B12.04c |||aminotransferase class I and II|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 421
Score = 26.2 bits (55), Expect = 3.4
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = -2
Query: 413 SGPRPVLWAGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPR---VNTKPTLPLMCGNSF 243
+G PV + + G++ P AGAW L N L T + +NT P PL G F
Sbjct: 138 NGGVPVYVPIIPPEEGSVKPVSAGAWKLDMNKLRNAITEKTKMIVINT-PHNPL--GKIF 194
Query: 242 SRAGL 228
S L
Sbjct: 195 SEEEL 199
>SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1822
Score = 26.2 bits (55), Expect = 3.4
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = -2
Query: 332 LFSNSLSRTSTRSPRVNTKPTLPLMCGNSFSRAGLLSRWSLMALRIIVFFPMST 171
LFSN + R + R+ T L+ GN++ + W+L+A I F +T
Sbjct: 1512 LFSNCICRDNITLSRIGTNCMQQLLSGNAYRFE--VKDWNLVADMFIELFKETT 1563
>SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 583
Score = 25.8 bits (54), Expect = 4.5
Identities = 13/54 (24%), Positives = 29/54 (53%)
Frame = +2
Query: 317 NCWRTKSRLQLVPVPLPHCQSSFPPTTPASVQRKPLSSKLFPSLPKFQRVLLKS 478
+ +R++ R L+ P +S PP TPA+ + + ++P+ R++L++
Sbjct: 79 SAFRSRYRGSLLNRNSPSLRSLSPPATPATPRSRIEGESQTSAIPQTDRLILEN 132
>SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory
subunit Ekc1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 838
Score = 25.8 bits (54), Expect = 4.5
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 386 PPTTPASVQRKPLSSKLFPSLPKFQRVLLKSST 484
PPTT + + +P FQ++LLK ST
Sbjct: 309 PPTTRDPIYLGTMLRLFAEKIPVFQKILLKPST 341
>SPAC186.08c |||L-lactate dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 330
Score = 25.4 bits (53), Expect = 6.0
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +1
Query: 91 KCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPA 237
K IVGA NVGS + +S + IV++ N +KA + +D N A
Sbjct: 22 KIVIVGAGNVGSTTAFTLLLSGLAAEIVIIDLN--KKKAEGEAMDLNHA 68
>SPBC428.17c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 602
Score = 25.4 bits (53), Expect = 6.0
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +2
Query: 362 LPHCQSSFPPTTPASVQRKPLSSKLFPSLPKFQRVLLK 475
L HC + P A Q KPL S+ + SL KF+ LK
Sbjct: 532 LSHCFLNDPK---AFAQLKPLISQFYESLHKFKNFHLK 566
>SPBC660.16 |||phosphogluconate dehydrogenase, decarboxylating
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 492
Score = 25.4 bits (53), Expect = 6.0
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -1
Query: 486 IVDDFNSTL*NFGRDGKSLEERGFLWTEAGVVGGNDD*QWG 364
IVD NS + R + L ++G L+ +GV GG + ++G
Sbjct: 101 IVDGGNSHYPDTTRRCEELAKKGILFVGSGVSGGEEGARYG 141
>SPBC21D10.10 |||bromodomain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 299
Score = 25.4 bits (53), Expect = 6.0
Identities = 16/66 (24%), Positives = 29/66 (43%)
Frame = +2
Query: 275 ASCSPAETSLRSVTNCWRTKSRLQLVPVPLPHCQSSFPPTTPASVQRKPLSSKLFPSLPK 454
A + E + + R++ + + P + + PTT +R LS++ SL K
Sbjct: 131 AKKAKTEAPVEAANKSLRSRKKTPEIAAPA-NIEPEVAPTTKTPKKRAALSNEEKQSLKK 189
Query: 455 FQRVLL 472
FQ +L
Sbjct: 190 FQSAML 195
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,753,361
Number of Sequences: 5004
Number of extensions: 59733
Number of successful extensions: 213
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 212
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 246098644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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