Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0284
(576 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0215 - 1714224-1714364,1714795-1715187,1715279-1715377,171... 215 2e-56
12_01_0211 - 1601129-1601272,1601670-1602062,1602142-1602240,160... 215 2e-56
11_01_0210 - 1647922-1648065,1648459-1648851,1648930-1649028,164... 215 2e-56
11_01_0676 - 5511755-5511831,5512857-5513052,5513462-5513577,551... 35 0.053
02_01_0561 + 4120268-4120339,4121462-4121588,4121715-4121770,412... 31 0.50
06_01_0349 + 2529279-2530446,2532232-2533036,2533066-2533106,253... 30 1.5
06_01_0080 + 644021-645463 30 1.5
11_01_0355 + 2679561-2680985,2681183-2682295 29 2.7
11_06_0269 - 21800104-21800655,21800824-21801370,21801398-21801513 29 3.5
06_01_0486 - 3455030-3455770 29 3.5
04_04_1641 + 34993807-34994589,34994924-34995022,34995521-349956... 29 3.5
03_05_0968 + 29277122-29277445,29278389-29278505,29278957-292791... 29 3.5
01_06_1014 - 33810112-33811995 29 3.5
12_02_0090 + 13493311-13494180 28 4.6
11_06_0266 - 21791757-21792982,21793154-21793178 28 4.6
07_03_0196 + 14995224-14995489,14995859-14995877,14996703-149968... 28 4.6
03_04_0243 + 19298293-19299117 28 4.6
11_06_0271 - 21804629-21805836,21805997-21806015 28 6.1
11_08_0037 + 27859867-27860382,27860471-27861440,27861647-278619... 27 8.1
11_06_0395 + 23088737-23088823,23090198-23090346,23090570-230907... 27 8.1
05_03_0195 - 9560885-9561435,9561553-9561639,9562199-9563225 27 8.1
03_05_0907 + 28678909-28679253 27 8.1
03_01_0168 + 1382531-1383931,1384028-1384150 27 8.1
02_01_0152 - 1070249-1070296,1070443-1070515,1070601-1070671,107... 27 8.1
>08_01_0215 -
1714224-1714364,1714795-1715187,1715279-1715377,
1716248-1716316,1716408-1716665
Length = 319
Score = 215 bits (526), Expect = 2e-56
Identities = 107/180 (59%), Positives = 133/180 (73%), Gaps = 2/180 (1%)
Frame = +1
Query: 43 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHL 222
K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG SIVLMGKNT++R+ IK H
Sbjct: 11 KVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHA 70
Query: 223 DN--NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHN 396
DN N +L+P + GNVG +FT+GDL EVR+++ + KV APAR G +AP+ VV+P N
Sbjct: 71 DNTGNKEFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPPGN 130
Query: 397 TGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGL 576
TGL P +TSFFQ L+IPTKI+KGT+EII V ++K GDKVG+SE+ LL L I PFSYGL
Sbjct: 131 TGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAKLGIRPFSYGL 190
>12_01_0211 -
1601129-1601272,1601670-1602062,1602142-1602240,
1602920-1602988,1603071-1603328
Length = 320
Score = 215 bits (525), Expect = 2e-56
Identities = 107/180 (59%), Positives = 133/180 (73%), Gaps = 2/180 (1%)
Frame = +1
Query: 43 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHL 222
K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG SIVLMGKNT++R+ IK H
Sbjct: 11 KVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHA 70
Query: 223 DN--NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHN 396
DN N +L+P + GNVG +FT+GDL EVR+++ + KV APAR G +AP+ VV+P N
Sbjct: 71 DNTGNKDFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPPGN 130
Query: 397 TGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGL 576
TGL P +TSFFQ L+IPTKI+KGT+EII V ++K GDKVG+SE+ LL L I PFSYGL
Sbjct: 131 TGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAKLGIRPFSYGL 190
>11_01_0210 -
1647922-1648065,1648459-1648851,1648930-1649028,
1649706-1649774,1649877-1650134
Length = 320
Score = 215 bits (525), Expect = 2e-56
Identities = 107/180 (59%), Positives = 133/180 (73%), Gaps = 2/180 (1%)
Frame = +1
Query: 43 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHL 222
K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG SIVLMGKNT++R+ IK H
Sbjct: 11 KVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHA 70
Query: 223 DN--NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHN 396
DN N +L+P + GNVG +FT+GDL EVR+++ + KV APAR G +AP+ VV+P N
Sbjct: 71 DNTGNKDFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPPGN 130
Query: 397 TGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGL 576
TGL P +TSFFQ L+IPTKI+KGT+EII V ++K GDKVG+SE+ LL L I PFSYGL
Sbjct: 131 TGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAKLGIRPFSYGL 190
>11_01_0676 -
5511755-5511831,5512857-5513052,5513462-5513577,
5513752-5514597,5515515-5515766,5522344-5525206
Length = 1449
Score = 34.7 bits (76), Expect = 0.053
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 9/108 (8%)
Frame = +1
Query: 148 ISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKL-LPH--IKGNVGFVFTRGDLVEVRDK 318
I L + L+ + ++ L N AL+KL LPH ++GN+GF+ + + ++ D
Sbjct: 372 IGLLQKLVYLLLSANQLSGSVPRTLGNIAALQKLVLPHNNLEGNMGFLSSLSECRQLEDL 431
Query: 319 LLENKVQAPARPGAIAPLSV----VIPAHN--TGLGPEKTSFFQALSI 444
+L++ A P + LS I HN G PEK S +L +
Sbjct: 432 ILDHNSFVGALPDHLGNLSARLISFIADHNKLAGSLPEKMSNLSSLEL 479
>02_01_0561 +
4120268-4120339,4121462-4121588,4121715-4121770,
4121841-4121912,4122017-4122128,4122247-4122284,
4122412-4122513,4122619-4122675,4122755-4122826,
4122992-4123093,4123210-4123405,4123988-4124094,
4124497-4124691,4124771-4124857,4124905-4124913,
4125599-4125703,4126067-4126164,4126250-4126328,
4126912-4127000,4127086-4127200
Length = 629
Score = 31.5 bits (68), Expect = 0.50
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Frame = +1
Query: 232 PALEK-LLPHIKGN---VGFVFTRGDLVEV--RDKLLENKVQAPARPGAIAPLSVVIPA 390
PAL+K L H K VG + T GDL + + L+++KV P PGA+ +S + PA
Sbjct: 131 PALDKDALWHFKPEKLGVGDIITGGDLYAIVNENTLMQHKVALP--PGAMGKISYIAPA 187
>06_01_0349 +
2529279-2530446,2532232-2533036,2533066-2533106,
2533219-2533424
Length = 739
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +2
Query: 200 AKPSKTTWTTIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRTKSRLQLVPVPLP 367
A ++W +QP +R L S + LR+V WR+ +RLQ +P PLP
Sbjct: 397 AAVQSSSWADLQPELLGLVLTR--LPSLAD-RVRLRAVCRPWRSNARLQPLPPPLP 449
>06_01_0080 + 644021-645463
Length = 480
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -1
Query: 486 IVDDFNSTL*NFGRDGKSLEERGFLWTEAGVVGGND 379
I+D N N R K++EERG L+ GV GG +
Sbjct: 100 IIDGGNEWYENTERREKAMEERGLLYLGMGVSGGEE 135
>11_01_0355 + 2679561-2680985,2681183-2682295
Length = 845
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +2
Query: 221 WTTIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRTKSRLQLVP 355
W ++ HTS TL+ SP+ +S+ T+C+ + + P
Sbjct: 480 WNPMRNGSAPHHTSELTLSFSSPSPSSISGYTSCYNNNNMMSSKP 524
>11_06_0269 - 21800104-21800655,21800824-21801370,21801398-21801513
Length = 404
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 281 CSPAETSLRSVTNCWRTKSRLQLVPVPLP 367
C+ +RSV + WR + +Q P PLP
Sbjct: 82 CAAGRARVRSVCSSWRNAAAIQRPPRPLP 110
>06_01_0486 - 3455030-3455770
Length = 246
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +2
Query: 353 PVPLPHCQSSFPPTTPASVQRKPLSSKLFPSLPKF 457
P P P C S PP TP + R P + PS P +
Sbjct: 66 PPPSPRCPSCHPPYTPPT-PRPPPTPPYVPSPPPY 99
>04_04_1641 +
34993807-34994589,34994924-34995022,34995521-34995648,
34996095-34996235,34996456-34996542,34996627-34996780,
34998569-34998628,34999019-34999447,34999524-34999819,
35000278-35000407,35000690-35001187
Length = 934
Score = 28.7 bits (61), Expect = 3.5
Identities = 20/51 (39%), Positives = 24/51 (47%)
Frame = +2
Query: 353 PVPLPHCQSSFPPTTPASVQRKPLSSKLFPSLPKFQRVLLKSSTMYTS*SP 505
P P PH S PP P S + LSSKL P P+ S+T T+ P
Sbjct: 51 PPPPPHRPSPSPPPNPLS-SKLWLSSKLSPPPPETLEQPEPSTTTTTTTPP 100
>03_05_0968 +
29277122-29277445,29278389-29278505,29278957-29279114,
29279678-29279727,29279968-29280161,29280867-29281049,
29281152-29281270,29281383-29281522,29281857-29281937,
29282286-29282389
Length = 489
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 288 GEHEANVALDVWQQFLEGWIVVQVVFDGFAHH 193
G HEA+ L W+ + GW + F GFA H
Sbjct: 189 GNHEASNYL--WELYYGGWAAPNIYFLGFAGH 218
>01_06_1014 - 33810112-33811995
Length = 627
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +2
Query: 332 KSRLQLVPVPLPHCQSSFPPTTPASVQRKPLSSKLFPSLPK--FQRVLLKSSTMYT 493
K R++L P+ +P + S PP PAS K L + + + +R +L++STM T
Sbjct: 104 KDRMKL-PLHVPVIKPSVPPLLPASSPAKLLPANVSEEWRRLEIERKILENSTMST 158
>12_02_0090 + 13493311-13494180
Length = 289
Score = 28.3 bits (60), Expect = 4.6
Identities = 26/98 (26%), Positives = 37/98 (37%), Gaps = 5/98 (5%)
Frame = +2
Query: 266 ATLASCSPAETSLRSVTNCWRTKSRLQLVPVPLPHCQSSFPPTTPASVQRKPLSSKLFPS 445
AT ++ PA S + L ++ VP P SS TT ++ P S+ S
Sbjct: 106 ATTSAPKPATASSPTKVPALSVNPILSIIGVPSPTTTSSLATTTTSTAVLFPRSTLSSAS 165
Query: 446 LPKFQR-----VLLKSSTMYTS*SPVTRLELLKPPFST 544
P F KSST YT + + + P T
Sbjct: 166 TPSFTTTSSPVTAPKSSTKYTVATEIVLSPVFPPSCQT 203
>11_06_0266 - 21791757-21792982,21793154-21793178
Length = 416
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +2
Query: 302 LRSVTNCWRTKSRLQLVPVPLP 367
LRSV WR +RL P PLP
Sbjct: 41 LRSVCQAWRAAARLHRPPPPLP 62
>07_03_0196 +
14995224-14995489,14995859-14995877,14996703-14996839,
14998365-14998457,15001597-15001932,15003035-15003503
Length = 439
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = -1
Query: 360 GTGTSWSLDFVLQQFVTDLNEVSAGEHEANVALDVWQQFLEGW 232
G +WS F +LN +S H+ V L+ W + W
Sbjct: 197 GNAENWSSQGDKDDFYNELNTISEARHKNLVKLEGWCCHINAW 239
>03_04_0243 + 19298293-19299117
Length = 274
Score = 28.3 bits (60), Expect = 4.6
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -2
Query: 383 MTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPTLPLMCGNSFS 240
+ TD+ + APG A A + S SRTS +P ++ PT P +S +
Sbjct: 172 VVTDSLSRAPGAAWAAAMAPTSWSRTS--APPASSSPTSPRRARSSLT 217
>11_06_0271 - 21804629-21805836,21805997-21806015
Length = 408
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 281 CSPAETSLRSVTNCWRTKSRLQLVPVPLP 367
C+ +RSV WR + +Q P PLP
Sbjct: 32 CAADRARVRSVCRSWRAAAAIQRPPPPLP 60
>11_08_0037 +
27859867-27860382,27860471-27861440,27861647-27861991,
27862074-27862693
Length = 816
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 244 KLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAP 345
KLLP VGFV RG V+ +K+++ P
Sbjct: 464 KLLPLDANKVGFVNVRGPHVQAPEKIMDGDYTGP 497
>11_06_0395 + 23088737-23088823,23090198-23090346,23090570-23090708,
23090795-23090889,23090967-23091080,23091674-23091803,
23091931-23092052,23092889-23093007,23093946-23094034,
23094072-23094245,23094310-23094616,23094726-23095180,
23095334-23096315,23096381-23097396,23097757-23097792,
23098065-23098130
Length = 1359
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +1
Query: 85 YPKCFI--VGADNVGSQQMQQIRISLRGSSIV 174
Y KC I VG DN+ Q MQQ R SL I+
Sbjct: 1292 YTKCLIISVGRDNIPWQWMQQNRTSLETLEIL 1323
>05_03_0195 - 9560885-9561435,9561553-9561639,9562199-9563225
Length = 554
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1
Query: 43 KSNYFVKIIQLLDEYPKCF 99
+++Y VKII+LL EY CF
Sbjct: 68 RADYKVKIIELLKEYVDCF 86
>03_05_0907 + 28678909-28679253
Length = 114
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -2
Query: 404 RPVLWAGMTTDNGAMAPGRAGA 339
RP+L NGA APG AGA
Sbjct: 53 RPLLHGSAAAANGASAPGNAGA 74
>03_01_0168 + 1382531-1383931,1384028-1384150
Length = 507
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 9/43 (20%)
Frame = +2
Query: 152 RYVAPVSCSW---------EKTL*CAKPSKTTWTTIQPSRNCC 253
R VAPV C W ++ + KP W P RNCC
Sbjct: 433 RRVAPVKCGWRIPDPAALLDRVIVLKKPDPNLWKR-SPRRNCC 474
>02_01_0152 -
1070249-1070296,1070443-1070515,1070601-1070671,
1070768-1070874,1071836-1072007
Length = 156
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 184 KNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLE 327
K T RK HL N AL K+ V +G L+E+ D+L++
Sbjct: 86 KVTGKRKRNAQHLQENSALCKVCTSSNSFVVRCCVKGSLLEINDRLIK 133
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,124,629
Number of Sequences: 37544
Number of extensions: 453913
Number of successful extensions: 1526
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1522
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1340735508
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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