Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0280
         (402 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   0.85 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   4.5  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   6.0  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    20   7.9  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 0.85
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +1

Query: 13  GFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRLIYF 144
           G ++   + FY I  S YN+  TTF  F +N ++   +  +I+F
Sbjct: 240 GSIFMTTTSFYRILNSGYNL--TTFGSFIFNANS--AIEGIIFF 279


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +1

Query: 16  FLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTST 114
           +L+T   I+Y+++ +    F  T  +F   TST
Sbjct: 152 YLFTVYYIYYSVHEASIINFGYTLAKFMIFTST 184


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +1

Query: 40  FYNIYWSKYNIFSTTFFRFSWNTSTIFRLSR 132
           FY IY   YNI + +   +    +T  R+++
Sbjct: 39  FYKIYKYTYNIVAVSLTAYMVYITTNLRITQ 69


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.2 bits (40), Expect = 7.9
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -3

Query: 76  KKCYIYSNKYCKKLNF*YIRILV 8
           +K  + +NKYC  +   Y+ + V
Sbjct: 312 RKTVLKTNKYCNFIILFYLSVFV 334


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,310
Number of Sequences: 336
Number of extensions: 1507
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8646818
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)