Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0275
         (409 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   3.5  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   3.5  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   4.6  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   6.1  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   6.1  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    20   8.1  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -3

Query: 302 EEGYLKLSLIRYNYILTAGRASLLC 228
           E  Y     ++  YI T  RASL+C
Sbjct: 167 ERYYAICKPLKAGYICTKTRASLIC 191


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -3

Query: 302 EEGYLKLSLIRYNYILTAGRASLLC 228
           E  Y     ++  YI T  RASL+C
Sbjct: 167 ERYYAICKPLKAGYICTKTRASLIC 191


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = -2

Query: 261 YIDSGAGVLIMLC*ELML-DRQRHFIEQ 181
           Y+D G   +I+LC ++   D Q  F E+
Sbjct: 252 YVDGGRNEIILLCEKVAKEDIQVRFFEE 279


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 297 FFSGGIFLKNVKILHTLNG 353
           F + G FL N  +LHT+ G
Sbjct: 344 FSACGFFLINGTLLHTIVG 362


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 297 FFSGGIFLKNVKILHTLNG 353
           F + G FL N  +LHT+ G
Sbjct: 169 FSACGFFLINGTLLHTIVG 187


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -2

Query: 405 DTHYRFMRRIYDRKYQTLRS 346
           D  Y F+   +DR Y+  R+
Sbjct: 399 DQFYNFLNHNFDRHYEENRA 418


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,471
Number of Sequences: 336
Number of extensions: 1669
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8857716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)