Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0275
         (409 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    25   0.80 
AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding pr...    24   2.5  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   3.2  
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             22   9.9  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    22   9.9  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    22   9.9  

>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1022

 Score = 25.4 bits (53), Expect = 0.80
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 395  IALCGEYMIANTRLSVQSMKDFDV 324
            I +CG Y++   RL      DFDV
Sbjct: 933  IFICGMYLLTRLRLEQDLQADFDV 956


>AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding
           protein AgamOBP52 protein.
          Length = 170

 Score = 23.8 bits (49), Expect = 2.5
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +2

Query: 149 CCYSPPCAREHCSIKC 196
           CC + P   EH S KC
Sbjct: 35  CCQTEPLIPEHVSTKC 50


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.4 bits (48), Expect = 3.2
 Identities = 10/50 (20%), Positives = 27/50 (54%)
 Frame = -2

Query: 219 ELMLDRQRHFIEQCSRAHGGL*QHAICGKTTRTSIKLHNLKRLYQNLIST 70
           E  L R R + +  +  +G + ++  C K+  T++++    RL+ +++ +
Sbjct: 517 ESFLQRGREYADIANAYYGPVIENFNCDKSIYTAVEVTAGNRLFHHIVES 566


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 21.8 bits (44), Expect = 9.9
 Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = -2

Query: 168  HGGL*QHAICGKTTRTSIKLHN-LKRLYQ 85
            H  L +  ICG T   +  LHN +++L Q
Sbjct: 925  HDALLEAVICGSTEVPARSLHNHIQKLMQ 953


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 21.8 bits (44), Expect = 9.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 148 RDLRKNDQNINQTTQ 104
           +DLR  D+N+NQ  Q
Sbjct: 537 KDLRSLDENVNQIHQ 551


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 21.8 bits (44), Expect = 9.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 148 RDLRKNDQNINQTTQ 104
           +DLR  D+N+NQ  Q
Sbjct: 538 KDLRSLDENVNQIHQ 552


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 400,937
Number of Sequences: 2352
Number of extensions: 7394
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32922351
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)