Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0275
         (409 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    25   0.44 
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   4.1  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   5.4  
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    20   9.4  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    20   9.4  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 24.6 bits (51), Expect = 0.44
 Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = +2

Query: 92  SRFKLCSLIDVLVVFPQIACCYSPPC-AREHCSIKCLCLSSINS 220
           S+   CS +D   +   +   +   C +R H    CLCL S+N+
Sbjct: 321 SQASSCSCLDCDEIRESLDTQFLQVCRSRRHSDSCCLCLDSMNA 364


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -1

Query: 196 AFYRTMFTCTRWTITTRDLRKNDQNINQTTQ 104
           AFY   F    W +T R   K+  N++ + +
Sbjct: 360 AFYSADFRLAFWRLTCRKCFKSRTNLDPSNR 390


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 164 PCAREHCSIKCLCLSSINS 220
           PCA ++C I   C  S NS
Sbjct: 81  PCASKYCGIGKECELSPNS 99


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 158 SPPCAREHCSIKCLCLSSINS 220
           S P   E CS  C+  S +NS
Sbjct: 14  SKPFKCEKCSYSCVNKSMLNS 34


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 309 GIFLKNVKILHTLNGESGI 365
           G+F  N   L+T NG  G+
Sbjct: 356 GLFADNPYPLNTTNGRKGL 374


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,537
Number of Sequences: 438
Number of extensions: 2278
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10256061
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)