Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0271
         (560 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         27   0.32 
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         27   0.32 
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    25   1.3  
U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase...    23   5.2  
L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7...    23   9.0  

>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 27.5 bits (58), Expect = 0.32
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +3

Query: 234 YKKAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATL 377
           Y++ K  +K A +  +RP  A +   L ++K     N Y T+  + TL
Sbjct: 484 YRRTKQPKKRADSEEKRPRTAFSNAQLQRLKNEFNENRYLTEKRRQTL 531


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 27.5 bits (58), Expect = 0.32
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +3

Query: 234 YKKAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATL 377
           Y++ K  +K A +  +RP  A +   L ++K     N Y T+  + TL
Sbjct: 484 YRRTKQPKKRADSEEKRPRTAFSNAQLQRLKNEFNENRYLTEKRRQTL 531


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 19/69 (27%), Positives = 32/69 (46%)
 Frame = +1

Query: 43  VVTELDDHPQQQCIPCEEAQYQKAVQQGAEQCD*PPLLQVQRLDSQESRWCRGEP*QGRD 222
           V  +L    QQQ  P ++ Q Q+  QQ   +   PP L+ QR   Q  +  + +  Q + 
Sbjct: 265 VPPQLRQQRQQQQRPRQQQQQQQQQQQQQGERYVPPQLRQQRQQQQHQQQQQQQQQQRQQ 324

Query: 223 SQ*CTRKQR 249
            Q   ++Q+
Sbjct: 325 QQRQQQRQQ 333


>U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 250

 Score = 23.4 bits (48), Expect = 5.2
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 358 SVR*WLAFNNLFTLYSDLLAPALN 287
           +V+ WLA NN+ T+    L+P LN
Sbjct: 163 TVQTWLADNNVKTMKWPALSPDLN 186


>L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7
           protein.
          Length = 192

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 379 VVLQPSSAPRGPSKQKRLRQP 441
           ++ +P    R P+KQKR R P
Sbjct: 98  ILPKPMRGRRDPNKQKRPRSP 118


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 576,551
Number of Sequences: 2352
Number of extensions: 11763
Number of successful extensions: 59
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52563375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)