Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0270
         (690 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    24   1.0  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    24   1.3  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   3.1  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   5.4  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   9.5  

>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
 Frame = +3

Query: 213 PSSVQCFLEISEI-VTQWQEI*KKPI*LKVTAE-HSRSCGQNGKQSTSPKHVISDPPD 380
           P++V  F E   I VT +Q   +K   LK+     ++   +NGK S   K ++S+ PD
Sbjct: 164 PTNVFTFPETQFIAVTAYQN--EKITKLKINYNPFAKGFRENGKSSAKRKQLVSEHPD 219


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 7/31 (22%), Positives = 16/31 (51%)
 Frame = +2

Query: 311 FPILRTEWKAVDVAQTRHFGSSRSTNGAFRY 403
           +P+   EW  +++   +H+ S+   +   RY
Sbjct: 116 WPLFLNEWTKIEINLLKHYQSTTDLHKKIRY 146


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = -1

Query: 633 FSIPLTSRELTGLKPDDVANTNSNKSRASQN 541
           FS+PL    L  L P    N  +N    +QN
Sbjct: 48  FSLPLDLEPLPSLFPFSPCNNTANYKSEAQN 78


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +1

Query: 262 GRKFKKNLYSLKL 300
           GRK +KNLY L L
Sbjct: 92  GRKIRKNLYYLLL 104


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 198 IHLFRPSSVQCFLEISEIVTQWQE 269
           IH     +V CFL   ++   W+E
Sbjct: 366 IHHLARHAVACFLTRGDLWLSWEE 389


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,396
Number of Sequences: 336
Number of extensions: 3524
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)