Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0267
(386 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 69 2e-11
UniRef50_Q34505 Cluster: Cytochrome c oxidase subunit I; n=46; N... 67 1e-10
UniRef50_O03826 Cluster: Cytochrome oxidase subunit I; n=21; Pro... 57 1e-07
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 55 5e-07
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 53 2e-06
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 53 2e-06
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 53 2e-06
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 53 2e-06
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 52 3e-06
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 52 3e-06
UniRef50_A1INK5 Cluster: Cytochrome c oxidase subunit I; n=71; P... 52 4e-06
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 52 5e-06
UniRef50_Q5VIA7 Cluster: Cytochrome oxidase subunit I; n=1; Psyc... 50 2e-05
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 50 2e-05
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 49 4e-05
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 49 4e-05
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 49 4e-05
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 49 4e-05
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 48 8e-05
UniRef50_Q5W4C3 Cluster: Cytochrome oxidase subunit I; n=79; Pte... 47 1e-04
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 47 1e-04
UniRef50_Q35528 Cluster: Cytochrome oxidase subunit I; n=39; Aph... 45 4e-04
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 44 8e-04
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 44 0.001
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 44 0.001
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 43 0.002
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 43 0.002
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 42 0.004
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 42 0.005
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 42 0.005
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 42 0.005
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 41 0.007
UniRef50_Q6Y3P5 Cluster: Cytochrome oxidase subunit I; n=4; Tali... 41 0.007
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 41 0.010
UniRef50_Q1XAB3 Cluster: Cytochrome oxidase subunit I; n=14; Neo... 41 0.010
UniRef50_Q8WFY0 Cluster: Cytochrome oxidase subunit I; n=5; Euma... 40 0.013
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 40 0.022
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 40 0.022
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 39 0.029
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 38 0.051
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 38 0.051
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 38 0.067
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 38 0.067
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 38 0.067
UniRef50_Q8HN76 Cluster: Cytochrome c oxidase subunit I; n=21; A... 38 0.067
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 38 0.089
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 37 0.12
UniRef50_Q94ZM7 Cluster: COI protein; n=2; Sessilia|Rep: COI pro... 36 0.36
UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Re... 35 0.47
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 35 0.47
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 35 0.63
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 34 1.1
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 33 1.4
UniRef50_Q6RHX4 Cluster: Cytochrome c oxidase subunit I; n=26; E... 33 1.4
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ... 33 1.4
UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18; ... 33 1.9
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 33 1.9
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 33 1.9
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 33 2.5
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 33 2.5
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 32 3.3
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 32 4.4
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 32 4.4
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 31 5.8
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 31 5.8
UniRef50_Q5UC96 Cluster: Cytochrome c oxidase subunit I; n=48; F... 31 5.8
UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 31 7.7
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 31 7.7
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 69.3 bits (162), Expect = 2e-11
Identities = 32/36 (88%), Positives = 33/36 (91%)
Frame = +1
Query: 214 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELPILRN 321
NQRI LFSLN+PSSIE YQNLPPAEHSYNELPIL N
Sbjct: 451 NQRIILFSLNMPSSIEWYQNLPPAEHSYNELPILSN 486
>UniRef50_Q34505 Cluster: Cytochrome c oxidase subunit I; n=46;
Neoptera|Rep: Cytochrome c oxidase subunit I - Eueides
tales
Length = 95
Score = 67.3 bits (157), Expect = 1e-10
Identities = 35/74 (47%), Positives = 38/74 (51%)
Frame = +1
Query: 100 YSDYPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQRINLFSLNLPSSIE*YQNLP 279
YSDYPD NQR+ LFSLN+PSSIE YQN P
Sbjct: 1 YSDYPDNYMSWNIISSFGSYISLFSMILIIIIIWESMINQRMILFSLNMPSSIEWYQNFP 60
Query: 280 PAEHSYNELPILRN 321
P+EHSYNELPIL N
Sbjct: 61 PSEHSYNELPILSN 74
>UniRef50_O03826 Cluster: Cytochrome oxidase subunit I; n=21;
Prodoxidae|Rep: Cytochrome oxidase subunit I - Greya
powelli
Length = 52
Score = 57.2 bits (132), Expect = 1e-07
Identities = 27/36 (75%), Positives = 29/36 (80%)
Frame = +1
Query: 214 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELPILRN 321
N+ I LFSLN+ SSIE QN PPAEHSYNELPIL N
Sbjct: 16 NKNIVLFSLNMNSSIEWLQNFPPAEHSYNELPILTN 51
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 54.8 bits (126), Expect = 5e-07
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +2
Query: 5 YILKIQFFTIFIGVNITFFPQHFLGLAGIPR 97
Y LKI F+ FIGVN+ FFPQHFLGL+G+PR
Sbjct: 392 YFLKIHFYLTFIGVNLIFFPQHFLGLSGMPR 422
Score = 33.1 bits (72), Expect = 1.9
Identities = 23/82 (28%), Positives = 28/82 (34%)
Frame = +1
Query: 58 FSTTFFRFSWNTSRYSDYPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQRINLFS 237
F F S RYSDYPD QR +F
Sbjct: 410 FPQHFLGLSGMPRRYSDYPDMYLNWNLFSSFGSLISLIGVFLFIFIIWESLIMQRFVIFV 469
Query: 238 LNLPSSIE*YQNLPPAEHSYNE 303
+ SSIE + PP +HSY+E
Sbjct: 470 KFINSSIEWFHLYPPLDHSYDE 491
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 53.2 bits (122), Expect = 2e-06
Identities = 22/32 (68%), Positives = 27/32 (84%)
Frame = +2
Query: 8 ILKIQFFTIFIGVNITFFPQHFLGLAGIPRDI 103
+ K+QF+ +FIGVN TFFPQHFLGL G+PR I
Sbjct: 516 LAKMQFWLLFIGVNATFFPQHFLGLQGMPRRI 547
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 53.2 bits (122), Expect = 2e-06
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = +2
Query: 14 KIQFFTIFIGVNITFFPQHFLGLAGIPRDI 103
KI F+ +FIGVN+TFFPQHFLGL G+PR I
Sbjct: 437 KIHFWILFIGVNLTFFPQHFLGLQGMPRRI 466
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 52.8 bits (121), Expect = 2e-06
Identities = 22/28 (78%), Positives = 25/28 (89%)
Frame = +2
Query: 14 KIQFFTIFIGVNITFFPQHFLGLAGIPR 97
KI F +FIGVN+TFFPQHFLGLAG+PR
Sbjct: 411 KIHFGVMFIGVNLTFFPQHFLGLAGMPR 438
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 52.8 bits (121), Expect = 2e-06
Identities = 22/28 (78%), Positives = 25/28 (89%)
Frame = +2
Query: 14 KIQFFTIFIGVNITFFPQHFLGLAGIPR 97
KI F +FIGVN+TFFPQHFLGLAG+PR
Sbjct: 411 KIHFGVMFIGVNLTFFPQHFLGLAGMPR 438
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 52.4 bits (120), Expect = 3e-06
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = +2
Query: 14 KIQFFTIFIGVNITFFPQHFLGLAGIPR 97
KI F +F+GVN+TFFPQHFLGLAG+PR
Sbjct: 400 KIHFGVMFVGVNLTFFPQHFLGLAGMPR 427
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 52.4 bits (120), Expect = 3e-06
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = +2
Query: 17 IQFFTIFIGVNITFFPQHFLGLAGIPR 97
I F+ +F+GVNITFFPQHFLGLAG+PR
Sbjct: 379 IHFWLMFLGVNITFFPQHFLGLAGLPR 405
>UniRef50_A1INK5 Cluster: Cytochrome c oxidase subunit I; n=71;
Pancrustacea|Rep: Cytochrome c oxidase subunit I -
Psilochaeta pampiana
Length = 76
Score = 52.0 bits (119), Expect = 4e-06
Identities = 29/75 (38%), Positives = 35/75 (46%)
Frame = +1
Query: 97 RYSDYPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQRINLFSLNLPSSIE*YQNL 276
RY+DYP+ QR+ LFS+ L SSIE QN
Sbjct: 1 RYADYPEVHTTWNVISTIGSTISFLGILYFFYIIWESLITQRMVLFSIQLCSSIEWLQNS 60
Query: 277 PPAEHSYNELPILRN 321
PPAEHSY+ELP+L N
Sbjct: 61 PPAEHSYSELPLLTN 75
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 51.6 bits (118), Expect = 5e-06
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = +2
Query: 14 KIQFFTIFIGVNITFFPQHFLGLAGIPR 97
KI F +FIGVN+TFFPQHFLGL+G+PR
Sbjct: 411 KIHFTIMFIGVNLTFFPQHFLGLSGMPR 438
>UniRef50_Q5VIA7 Cluster: Cytochrome oxidase subunit I; n=1; Psyche
norvegica|Rep: Cytochrome oxidase subunit I - Psyche
norvegica
Length = 63
Score = 50.0 bits (114), Expect = 2e-05
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = +1
Query: 217 QRINLFSLNLPSSIE*YQNLPPAEHSYNELPILRN 321
QRI LF N+ SSIE +QN PPA HSY+E+PIL N
Sbjct: 28 QRILLFPSNMTSSIEWFQNTPPANHSYDEMPILIN 62
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 49.6 bits (113), Expect = 2e-05
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +2
Query: 14 KIQFFTIFIGVNITFFPQHFLGLAGIPRDI 103
K F+ +F GVN+TFFPQHFLGL G+PR I
Sbjct: 411 KAHFWVLFTGVNLTFFPQHFLGLQGMPRRI 440
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 48.8 bits (111), Expect = 4e-05
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = +2
Query: 14 KIQFFTIFIGVNITFFPQHFLGLAGIPR 97
K F +F GVN+TFFPQHFLGLAG+PR
Sbjct: 412 KAHFGVMFTGVNLTFFPQHFLGLAGMPR 439
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 48.8 bits (111), Expect = 4e-05
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = +2
Query: 14 KIQFFTIFIGVNITFFPQHFLGLAGIPR 97
K F +F GVN+TFFPQHFLGLAG+PR
Sbjct: 412 KAHFGVMFTGVNLTFFPQHFLGLAGMPR 439
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 48.8 bits (111), Expect = 4e-05
Identities = 35/72 (48%), Positives = 38/72 (52%)
Frame = +2
Query: 98 DIQIIQTHIFHEI*FLH*VHIFLYYQ***Y*LLFENQ*LTNELTYFL*ISHHQLNDIKIY 277
DI IIQ EI F H F Y LLFENQ EL Y + LND KIY
Sbjct: 436 DILIIQILTSLEISFHHSDLTFHCLPSYSYSLLFENQSFITELLYLPSMYLLLLNDTKIY 495
Query: 278 HQQNIHIMNYQF 313
QQ+IH+MNYQF
Sbjct: 496 LQQSIHMMNYQF 507
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 48.8 bits (111), Expect = 4e-05
Identities = 20/30 (66%), Positives = 25/30 (83%)
Frame = +2
Query: 14 KIQFFTIFIGVNITFFPQHFLGLAGIPRDI 103
+I F++ FIGVN+TF P HFLGLAG+PR I
Sbjct: 418 QIHFWSTFIGVNLTFMPMHFLGLAGMPRRI 447
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 47.6 bits (108), Expect = 8e-05
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = +2
Query: 14 KIQFFTIFIGVNITFFPQHFLGLAGIPRDI 103
+I F+ F GVN+TFFP HFLGL+G+PR I
Sbjct: 413 QIHFWITFFGVNLTFFPMHFLGLSGMPRRI 442
>UniRef50_Q5W4C3 Cluster: Cytochrome oxidase subunit I; n=79;
Pterygota|Rep: Cytochrome oxidase subunit I -
Biopyrellia bipuncta
Length = 68
Score = 47.2 bits (107), Expect = 1e-04
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 214 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELPILRN 321
+QR +F + L SS+E QN PPAEHSYNELP+L N
Sbjct: 32 SQRQVIFPVQLNSSMEWLQNTPPAEHSYNELPLLVN 67
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 46.8 bits (106), Expect = 1e-04
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 14 KIQFFTIFIGVNITFFPQHFLGLAGIPR 97
++ F+ FIG NITFFPQHFLG G+PR
Sbjct: 516 QVHFWVFFIGTNITFFPQHFLGRQGMPR 543
>UniRef50_Q35528 Cluster: Cytochrome oxidase subunit I; n=39;
Aphidoidea|Rep: Cytochrome oxidase subunit I - Pemphigus
microsetosus
Length = 68
Score = 45.2 bits (102), Expect = 4e-04
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = +1
Query: 217 QRINLFSLNLPSSIE*YQNLPPAEHSYNELPILRN 321
+++ +F LNL +SIE NLPP EHSY+ELP++ N
Sbjct: 33 KKMVMFKLNLNNSIEWIHNLPPLEHSYSELPLVTN 67
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 44.4 bits (100), Expect = 8e-04
Identities = 16/31 (51%), Positives = 24/31 (77%)
Frame = +2
Query: 5 YILKIQFFTIFIGVNITFFPQHFLGLAGIPR 97
++ ++ F+ F GVN+ FFP HFLGL+G+PR
Sbjct: 450 FLGQLHFWVFFAGVNLLFFPMHFLGLSGMPR 480
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 43.6 bits (98), Expect = 0.001
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +2
Query: 23 FFTIFIGVNITFFPQHFLGLAGIPRDI 103
F +F+G NITFFP HF GLAG+PR +
Sbjct: 502 FGLMFVGFNITFFPMHFTGLAGMPRRV 528
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 43.6 bits (98), Expect = 0.001
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = +2
Query: 23 FFTIFIGVNITFFPQHFLGLAGIPRDI 103
F+ FIGVN TFFP HFLG G+PR I
Sbjct: 417 FWMTFIGVNFTFFPMHFLGSGGMPRRI 443
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 42.7 bits (96), Expect = 0.002
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +2
Query: 23 FFTIFIGVNITFFPQHFLGLAGIPRDIQ 106
F FIGVN TFFP H++GL G+PR Q
Sbjct: 420 FMLTFIGVNFTFFPMHWMGLTGMPRRYQ 447
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 42.7 bits (96), Expect = 0.002
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +2
Query: 2 SYILKIQFFTIFIGVNITFFPQHFLGLAGIPRDI 103
S ++ F F+G N+TFFP HF GL G+PR I
Sbjct: 417 SVMMMAVFVCFFVGTNMTFFPMHFAGLQGMPRKI 450
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 41.9 bits (94), Expect = 0.004
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +2
Query: 14 KIQFFTIFIGVNITFFPQHFLGLAGIPRDI 103
KI F FIG ++TFF QHF+GL G+PR +
Sbjct: 419 KISFVLFFIGFHLTFFIQHFVGLMGMPRRV 448
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 41.5 bits (93), Expect = 0.005
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +2
Query: 14 KIQFFTIFIGVNITFFPQHFLGLAGIPRDI 103
K+ F+ F G N+TFFP H LGL G+PR +
Sbjct: 432 KVAFWVTFAGFNLTFFPMHKLGLEGMPRRV 461
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 41.5 bits (93), Expect = 0.005
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = +2
Query: 14 KIQFFTIFIGVNITFFPQHFLGLAGIPR 97
K F FIG N TFFP HFLG+ G+PR
Sbjct: 462 KTHFVLTFIGANGTFFPMHFLGMQGMPR 489
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 41.5 bits (93), Expect = 0.005
Identities = 20/28 (71%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +2
Query: 23 FFTIF-IGVNITFFPQHFLGLAGIPRDI 103
FF IF IG NI FFPQ+FLGL G+PR I
Sbjct: 452 FFWIFMIGFNICFFPQYFLGLQGMPRRI 479
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 41.1 bits (92), Expect = 0.007
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2
Query: 23 FFTIFIGVNITFFPQHFLGLAGIPRDIQ 106
F+ +FIG N+TFFP H GL G+PR ++
Sbjct: 441 FWLMFIGFNVTFFPMHMAGLLGMPRRVR 468
>UniRef50_Q6Y3P5 Cluster: Cytochrome oxidase subunit I; n=4;
Talitridae|Rep: Cytochrome oxidase subunit I - Talitrus
saltator
Length = 59
Score = 41.1 bits (92), Expect = 0.007
Identities = 14/36 (38%), Positives = 28/36 (77%)
Frame = +1
Query: 214 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELPILRN 321
++R+ +F +++P+S+E + PPA+HSY++ P+L N
Sbjct: 23 SKRVYMFHMHMPTSLEWHHPSPPADHSYDDTPLLTN 58
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 40.7 bits (91), Expect = 0.010
Identities = 18/31 (58%), Positives = 20/31 (64%)
Frame = +2
Query: 23 FFTIFIGVNITFFPQHFLGLAGIPRDIQIIQ 115
F IF G N+TFFP H LGL G+PR I Q
Sbjct: 429 FGLIFSGFNLTFFPMHILGLQGMPRRIYTYQ 459
>UniRef50_Q1XAB3 Cluster: Cytochrome oxidase subunit I; n=14;
Neoptera|Rep: Cytochrome oxidase subunit I - Kalotermes
flavicollis
Length = 57
Score = 40.7 bits (91), Expect = 0.010
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = +1
Query: 214 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELPIL 315
N++I LF +SIE QNLPPAEHSY+ELP +
Sbjct: 21 NRQI-LFPTQTSNSIEWIQNLPPAEHSYSELPTI 53
>UniRef50_Q8WFY0 Cluster: Cytochrome oxidase subunit I; n=5;
Eumalacostraca|Rep: Cytochrome oxidase subunit I -
Paguristes turgidus
Length = 68
Score = 40.3 bits (90), Expect = 0.013
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = +1
Query: 229 LFSLNLPSSIE*YQNLPPAEHSYNELPILRN 321
+FSL+L SSIE + PPA+HSY E+P++ N
Sbjct: 37 MFSLSLASSIEWEHSYPPADHSYMEIPMISN 67
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 39.5 bits (88), Expect = 0.022
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = +1
Query: 13 KNSIFYNIYWSKYNIFSTTFFRFSWNTS 96
KN+IF IYWSK+NIFS+T S NT+
Sbjct: 328 KNTIFSYIYWSKFNIFSSTLCSISSNTT 355
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 39.5 bits (88), Expect = 0.022
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 14 KIQFFTIFIGVNITFFPQHFLGLAGIPR 97
K F+ F+G + FFP H+LGL G+PR
Sbjct: 450 KFHFWVTFLGAYLIFFPMHYLGLLGVPR 477
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 39.1 bits (87), Expect = 0.029
Identities = 19/30 (63%), Positives = 21/30 (70%)
Frame = +1
Query: 4 LYTKNSIFYNIYWSKYNIFSTTFFRFSWNT 93
L KNSIFYNI+ K IFSTTFF S +T
Sbjct: 111 LMIKNSIFYNIFSGKSYIFSTTFFSISSDT 140
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 38.3 bits (85), Expect = 0.051
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +2
Query: 17 IQFFTIFIGVNITFFPQHFLGLAGIPR 97
I F+ F+G + FFP H++G+AG PR
Sbjct: 473 IHFWFTFVGAYLVFFPMHYIGIAGFPR 499
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 38.3 bits (85), Expect = 0.051
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2
Query: 14 KIQFFTIFIGVNITFFPQHFLGLAGIPRDI 103
K+ F+ + +G N+ FFP H GL G+PR I
Sbjct: 446 KLTFWVVLVGFNLGFFPMHISGLLGMPRRI 475
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 37.9 bits (84), Expect = 0.067
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 17 IQFFTIFIGVNITFFPQHFLGLAGIPRDI 103
+QF+ +G N+TF QHFLGL G+PR +
Sbjct: 430 LQFWLWVLGFNMTFMVQHFLGLMGMPRRV 458
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 37.9 bits (84), Expect = 0.067
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 23 FFTIFIGVNITFFPQHFLGLAGIPRDIQIIQTHI 124
F+ +F G N+TF P H GL G+PR + H+
Sbjct: 455 FWLLFTGFNVTFLPMHLTGLKGMPRRVFTYPGHV 488
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 37.9 bits (84), Expect = 0.067
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 5 YILKIQFFTIFIGVNITFFPQHFLGLAGIPRDI 103
Y+L+ + +G N+ FFP H+LG+ G+PR +
Sbjct: 499 YLLQGHWLLSMVGFNLCFFPMHYLGIHGLPRRV 531
>UniRef50_Q8HN76 Cluster: Cytochrome c oxidase subunit I; n=21;
Aphidomorpha|Rep: Cytochrome c oxidase subunit I -
Phylloxera sp. DAD-2001a
Length = 83
Score = 37.9 bits (84), Expect = 0.067
Identities = 20/73 (27%), Positives = 31/73 (42%)
Frame = +1
Query: 97 RYSDYPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQRINLFSLNLPSSIE*YQNL 276
RYSDYP+ +++ +F LNL +SI N+
Sbjct: 8 RYSDYPNNYLTWNIMSSIGSMISTFSIIILIYWLWNSLFLKKMTIFKLNLNNSIGWIHNM 67
Query: 277 PPAEHSYNELPIL 315
PP H+Y+ELP++
Sbjct: 68 PPIGHTYSELPLI 80
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 37.5 bits (83), Expect = 0.089
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +2
Query: 14 KIQFFTIFIGVNITFFPQHFLGLAGIPRDI 103
K QF+ + I N+TFFP H G AG+PR I
Sbjct: 428 KWQFWLMLISFNLTFFPMHLSGNAGMPRRI 457
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 37.1 bits (82), Expect = 0.12
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 14 KIQFFTIFIGVNITFFPQHFLGLAGIPRDIQI 109
++ F FIG+N+TF P H LGL G+ R I +
Sbjct: 421 RLHFILTFIGMNLTFMPMHELGLMGMNRRIAL 452
>UniRef50_Q94ZM7 Cluster: COI protein; n=2; Sessilia|Rep: COI
protein - Balanus crenatus
Length = 58
Score = 35.5 bits (78), Expect = 0.36
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +1
Query: 214 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELP 309
+QR +FS NL S++E PP HSY+ELP
Sbjct: 22 SQRPTIFSPNLSSNLEWVHTTPPHYHSYDELP 53
>UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Rep:
Cytochrome oxidase I - Chaoborus pallidus
Length = 206
Score = 35.1 bits (77), Expect = 0.47
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +1
Query: 13 KNSIFYNIYWSKYNIFSTTFF 75
KNSI+ NIY SK NIFS TFF
Sbjct: 114 KNSIYNNIYSSKSNIFSPTFF 134
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 35.1 bits (77), Expect = 0.47
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 14 KIQFFTIFIGVNITFFPQHFLGLAGIPRDI 103
KI F F+G + FF QH LG+ G+PR +
Sbjct: 412 KIHFVFSFVGAVLLFFTQHILGIYGMPRRV 441
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 34.7 bits (76), Expect = 0.63
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +2
Query: 29 TIFIGVNITFFPQHFLGLAGIPRDI 103
T+FIG N+ FFP H LG+ PR I
Sbjct: 418 TLFIGSNMLFFPMHSLGMYAFPRRI 442
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 33.9 bits (74), Expect = 1.1
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +2
Query: 14 KIQFFTIFIGVNITFFPQHFLGLAGIPR 97
KI F FI +N TFF H LG+ G PR
Sbjct: 459 KIHFALTFIFLNGTFFTMHILGVGGFPR 486
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 33.5 bits (73), Expect = 1.4
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +2
Query: 2 SYILKIQFFTIFIGVNITFF 61
++ LKIQF +FIGVN+TFF
Sbjct: 320 NFFLKIQFIIMFIGVNLTFF 339
>UniRef50_Q6RHX4 Cluster: Cytochrome c oxidase subunit I; n=26;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Partamona helleri
Length = 88
Score = 33.5 bits (73), Expect = 1.4
Identities = 21/73 (28%), Positives = 28/73 (38%)
Frame = +1
Query: 97 RYSDYPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQRINLFSLNLPSSIE*YQNL 276
RYSDYPD ++R+ LF + SS+E N
Sbjct: 5 RYSDYPDSYYCWNFISSMGSMISMNSLLFLIFTIFESFMSKRLILFKFH-QSSLEWLNNY 63
Query: 277 PPAEHSYNELPIL 315
PP H NE+P+L
Sbjct: 64 PPFNHMCNEIPLL 76
>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 275
Score = 33.5 bits (73), Expect = 1.4
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 345 RGGARYPIRPIVSR 386
RGGARYPIRPIVSR
Sbjct: 260 RGGARYPIRPIVSR 273
>UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 541
Score = 33.1 bits (72), Expect = 1.9
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +2
Query: 8 ILKIQFFTIFIGVNITFFPQHFLGLAGIPR 97
+++ Q + FIG+ +T FP H++G+ G+PR
Sbjct: 400 LMRWQLWLWFIGMIVTTFPWHWVGILGMPR 429
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 33.1 bits (72), Expect = 1.9
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 14 KIQFFTIFIGVNITFFPQHFLGLAGIPRDI 103
K+ F FIG + + P H+ GL G+PR +
Sbjct: 436 KVHFVLTFIGATLNWLPLHWAGLLGMPRRV 465
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 33.1 bits (72), Expect = 1.9
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +1
Query: 4 LYTKNSIFYNIYWSKYNIFSTTFFRFSWNTS 96
L KNSIF NI+ K+NIF TF S + S
Sbjct: 112 LMIKNSIFNNIFSCKFNIFPPTFLSISRDAS 142
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 32.7 bits (71), Expect = 2.5
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 8 ILKIQFFTIFIGVNITFFPQHFLGLAGIPRDI 103
I+ + F+GV +TF P HFLG +PR I
Sbjct: 120 IIVLWSILFFVGVVLTFLPMHFLGFNVMPRRI 151
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 32.7 bits (71), Expect = 2.5
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 14 KIQFFTIFIGVNITFFPQHFLGLAGIPR 97
K+ F+ IG NITFF LG G+PR
Sbjct: 495 KMHFWLSMIGTNITFFAMILLGYGGMPR 522
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 32.3 bits (70), Expect = 3.3
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +2
Query: 35 FIGVNITFFPQHFLGLAGIPRDI 103
F+GV +TF P HFLG +PR I
Sbjct: 425 FVGVILTFLPMHFLGFNVMPRRI 447
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 31.9 bits (69), Expect = 4.4
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2
Query: 23 FFTIFIGVNITFFPQHFLGLAGIPR 97
F+ IG +TF PQ+ LGL G+PR
Sbjct: 431 FWLFMIGSWLTFLPQYILGLLGMPR 455
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 31.9 bits (69), Expect = 4.4
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 14 KIQFFTIFIGVNITFFPQHFLGLAGIPR 97
KI F+ F+G + TF QH++G G+PR
Sbjct: 433 KIHFWLTFVGFHGTFLIQHWVGNMGMPR 460
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 31.5 bits (68), Expect = 5.8
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +2
Query: 14 KIQFFTIF--IGVNITFFPQHFLGLAGIPRDIQI 109
K F +F IGV +TFFP +FLG G+ R I I
Sbjct: 447 KFNFNILFWLIGVILTFFPFYFLGYCGMIRRINI 480
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 31.5 bits (68), Expect = 5.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 23 FFTIFIGVNITFFPQHFLGLAGIPRDI 103
F+ +F G N+ FF H G+ G+PR +
Sbjct: 455 FWLMFSGFNLAFFMMHLTGMRGMPRRV 481
>UniRef50_Q5UC96 Cluster: Cytochrome c oxidase subunit I; n=48;
Formicidae|Rep: Cytochrome c oxidase subunit I -
Pheidole capellinii
Length = 68
Score = 31.5 bits (68), Expect = 5.8
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 223 INLFSLNLPSSIE*YQNLPPAEHSYNELP 309
IN+F LN +S+E PP HSYNE+P
Sbjct: 40 INMFFLN--ASLEWQNFYPPLNHSYNEIP 66
>UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1;
Methylococcus capsulatus|Rep: Cytochrome c oxidase,
subunit I - Methylococcus capsulatus
Length = 537
Score = 31.1 bits (67), Expect = 7.7
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 17 IQFFTIFIGVNITFFPQHFLGLAGIPRDIQIIQ 115
+Q + FIG+ I P H LGL G PR I +Q
Sbjct: 405 VQLWGWFIGMVIMTTPWHILGLLGQPRRISAVQ 437
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 31.1 bits (67), Expect = 7.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 14 KIQFFTIFIGVNITFFPQHFLGLAGIPR 97
++ F+ +G +TF PQ+ LG G+PR
Sbjct: 420 RLHFWLFLVGYLLTFLPQYALGYLGMPR 447
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 312,361,842
Number of Sequences: 1657284
Number of extensions: 4657169
Number of successful extensions: 9684
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 9439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9675
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 15718494179
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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