Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0267
         (386 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    23   2.9  
EF065522-1|ABK59322.1|  255|Anopheles gambiae beta carbonic anhy...    23   5.1  
X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...    22   9.0  

>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -1

Query: 284 AGGKF*YHSIDDGRFKENKL 225
           A GK+ YH  DDG   E  L
Sbjct: 121 ANGKYVYHDQDDGLLDERYL 140


>EF065522-1|ABK59322.1|  255|Anopheles gambiae beta carbonic
           anhydrase protein.
          Length = 255

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 163 KYMNLMKKLYFMKYMSLDNLNIA 95
           K MNL+ KL   ++ SLDN  I+
Sbjct: 106 KAMNLLYKLKDPEFASLDNRRIS 128


>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1

Query: 98  REVFQLNLKNVVEKML 51
           RE+   +LK VVEK+L
Sbjct: 177 REITSTDLKGVVEKLL 192


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 325,065
Number of Sequences: 2352
Number of extensions: 5020
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29929410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)