Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0266
         (681 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    27   0.14 
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    25   0.57 
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   3.1  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   3.1  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    22   4.0  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    22   4.0  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.1  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    21   9.3  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   9.3  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   9.3  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    21   9.3  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 27.1 bits (57), Expect = 0.14
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = +2

Query: 518 RCTRPVVPPVS-CWTPATVSPTPCPSTKDTHXP 613
           R  R VVPP   C  P+T+ P P     D++ P
Sbjct: 195 RSLRCVVPPTEDCDVPSTIPPPPPEEDDDSNIP 227


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 25.0 bits (52), Expect = 0.57
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +1

Query: 319 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 414
           +VT+W + E+I++     +L V     PV+LT
Sbjct: 158 VVTDWVNFERIYYKLTKKKLSVFFGNKPVILT 189


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +3

Query: 435 GQQREDDPDHVRNIQHARHVRRHPSRA 515
           GQ    DP+ V   +   H+  HP +A
Sbjct: 903 GQYTTKDPNEVTCDEEEGHISYHPDKA 929


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 145 CKAGFAGR*CSSR 183
           CK GF GR C S+
Sbjct: 326 CKLGFMGRHCESK 338


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 12/52 (23%), Positives = 23/52 (44%)
 Frame = +1

Query: 193 LDRGKAPPSGRDGRYGTEDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK 348
           LD+G+  P G+  +    ++   D A+    +      + H ++ N  DM K
Sbjct: 46  LDKGRCTPEGKKLKSTIPEALSTDCAKCNEKVKANVRKVLHHLIDNKPDMWK 97


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 288 PDPQIPHRTRNRH 326
           PD  +P RT NRH
Sbjct: 110 PDNFLPERTANRH 122



 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 270 CLISYIRVFCPIPTI 226
           CL+  +R+F P+P I
Sbjct: 51  CLMETLRMFPPVPII 65


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 357 MPNLLHVIPVSDDSVFD 307
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 357 MPNLLHVIPVSDDSVFD 307
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 357 MPNLLHVIPVSDDSVFD 307
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 357 MPNLLHVIPVSDDSVFD 307
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 193 LDRGKAPPSGRDGRYGTEDS 252
           LDRGK  P G++ +    D+
Sbjct: 49  LDRGKCSPDGQELKNNLADA 68


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/33 (27%), Positives = 13/33 (39%)
 Frame = -1

Query: 585 HGVGDTVAGVQHDTGGTTGRVQREHGLDGDVHG 487
           HG    V G+         ++  +H LD D  G
Sbjct: 600 HGYAFNVVGIGRSPDQNVKKINLKHALDLDRRG 632


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +3

Query: 45  LIYLFIIELFN*KLIQDVRRRSCRVGSRQWLRYVQGRFRREMMLLA 182
           L+Y F I  F   L+Q ++RR   +  +        + R E+  LA
Sbjct: 571 LMYEFQIFTFLMSLLQSIKRRYVLLNEKVEAIKTSPKMRHELQKLA 616


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 193 LDRGKAPPSGRDGRYGTEDS 252
           LDRGK  P G++ +    D+
Sbjct: 49  LDRGKCSPDGQELKNNLADA 68


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,384
Number of Sequences: 336
Number of extensions: 4389
Number of successful extensions: 19
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)