Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0265
(432 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY084146-1|AAL89884.1| 241|Drosophila melanogaster RE28509p pro... 48 7e-06
AE014134-2937|AAF53671.1| 239|Drosophila melanogaster CG10176-P... 41 6e-04
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P... 29 2.7
AJ011925-1|CAA09870.1| 2285|Drosophila melanogaster Kakapo protein. 27 8.2
AJ011924-1|CAA09869.1| 2396|Drosophila melanogaster Kakapo protein. 27 8.2
AF200425-1|AAF24343.1| 5201|Drosophila melanogaster Short stop/K... 27 8.2
AF200422-1|AAF24340.1| 638|Drosophila melanogaster Short stop/K... 27 8.2
AE013599-1792|AAF58320.2| 8805|Drosophila melanogaster CG18076-P... 27 8.2
AE013599-1791|AAM68562.1| 5160|Drosophila melanogaster CG18076-P... 27 8.2
AE013599-1790|AAF58319.3| 5501|Drosophila melanogaster CG18076-P... 27 8.2
AE013599-1789|AAM68561.1| 5201|Drosophila melanogaster CG18076-P... 27 8.2
AE013599-1788|AAG22268.2| 5390|Drosophila melanogaster CG18076-P... 27 8.2
AE013599-1787|AAF58317.1| 5385|Drosophila melanogaster CG18076-P... 27 8.2
>AY084146-1|AAL89884.1| 241|Drosophila melanogaster RE28509p
protein.
Length = 241
Score = 47.6 bits (108), Expect = 7e-06
Identities = 18/30 (60%), Positives = 19/30 (63%)
Frame = +1
Query: 259 TNRCAPCNVVCNKTHHNYDSGLCVKECQGY 348
T RC PC VCN HNYD+ LC KEC Y
Sbjct: 51 TERCHPCIEVCNNQTHNYDAFLCAKECSAY 80
>AE014134-2937|AAF53671.1| 239|Drosophila melanogaster CG10176-PA
protein.
Length = 239
Score = 41.1 bits (92), Expect = 6e-04
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +1
Query: 259 TNRCAPCNVVCNKTHHNYDSGLCVKE 336
T RC PC VCN HNYD+ LC KE
Sbjct: 51 TERCHPCIEVCNNQTHNYDAFLCAKE 76
>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
protein.
Length = 23015
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 5/67 (7%)
Frame = +3
Query: 81 YHSACVCSLRKCT---RCFREERDV--GIRVCPDASWRRLRSNTLDGIRCGQLICQLDEY 245
Y+ C + RKC C E+ + G VCP + + N C + C ++
Sbjct: 1060 YNGLCALAQRKCAADRECAANEKCIQPGECVCPPPYFLDPQDNNKCKSPCERFPCGINAK 1119
Query: 246 CFPGDQP 266
C P D P
Sbjct: 1120 CTPSDPP 1126
>AJ011925-1|CAA09870.1| 2285|Drosophila melanogaster Kakapo protein.
Length = 2285
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 229 HIS*PHLMPSKVFERRRRQEASGHTRIPTSLSSLKHRVH 113
H+S H +K+ +R + + HT + LS LK+ VH
Sbjct: 463 HVSELHKKVNKLHQRWAQLRTNFHTNLVQKLSGLKYPVH 501
>AJ011924-1|CAA09869.1| 2396|Drosophila melanogaster Kakapo protein.
Length = 2396
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 229 HIS*PHLMPSKVFERRRRQEASGHTRIPTSLSSLKHRVH 113
H+S H +K+ +R + + HT + LS LK+ VH
Sbjct: 574 HVSELHKKVNKLHQRWAQLRTNFHTNLVQKLSGLKYPVH 612
>AF200425-1|AAF24343.1| 5201|Drosophila melanogaster Short
stop/Kakapo long isoform protein.
Length = 5201
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 229 HIS*PHLMPSKVFERRRRQEASGHTRIPTSLSSLKHRVH 113
H+S H +K+ +R + + HT + LS LK+ VH
Sbjct: 574 HVSELHKKVNKLHQRWAQLRTNFHTNLVQKLSGLKYPVH 612
>AF200422-1|AAF24340.1| 638|Drosophila melanogaster Short
stop/Kakapo isoform C protein.
Length = 638
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 229 HIS*PHLMPSKVFERRRRQEASGHTRIPTSLSSLKHRVH 113
H+S H +K+ +R + + HT + LS LK+ VH
Sbjct: 533 HVSELHKKVNKLHQRWAQLRTNFHTNLVQKLSGLKYPVH 571
>AE013599-1792|AAF58320.2| 8805|Drosophila melanogaster CG18076-PH,
isoform H protein.
Length = 8805
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 229 HIS*PHLMPSKVFERRRRQEASGHTRIPTSLSSLKHRVH 113
H+S H +K+ +R + + HT + LS LK+ VH
Sbjct: 533 HVSELHKKVNKLHQRWAQLRTNFHTNLVQKLSGLKYPVH 571
>AE013599-1791|AAM68562.1| 5160|Drosophila melanogaster CG18076-PC,
isoform C protein.
Length = 5160
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 229 HIS*PHLMPSKVFERRRRQEASGHTRIPTSLSSLKHRVH 113
H+S H +K+ +R + + HT + LS LK+ VH
Sbjct: 533 HVSELHKKVNKLHQRWAQLRTNFHTNLVQKLSGLKYPVH 571
>AE013599-1790|AAF58319.3| 5501|Drosophila melanogaster CG18076-PA,
isoform A protein.
Length = 5501
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 229 HIS*PHLMPSKVFERRRRQEASGHTRIPTSLSSLKHRVH 113
H+S H +K+ +R + + HT + LS LK+ VH
Sbjct: 574 HVSELHKKVNKLHQRWAQLRTNFHTNLVQKLSGLKYPVH 612
>AE013599-1789|AAM68561.1| 5201|Drosophila melanogaster CG18076-PE,
isoform E protein.
Length = 5201
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 229 HIS*PHLMPSKVFERRRRQEASGHTRIPTSLSSLKHRVH 113
H+S H +K+ +R + + HT + LS LK+ VH
Sbjct: 574 HVSELHKKVNKLHQRWAQLRTNFHTNLVQKLSGLKYPVH 612
>AE013599-1788|AAG22268.2| 5390|Drosophila melanogaster CG18076-PB,
isoform B protein.
Length = 5390
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 229 HIS*PHLMPSKVFERRRRQEASGHTRIPTSLSSLKHRVH 113
H+S H +K+ +R + + HT + LS LK+ VH
Sbjct: 463 HVSELHKKVNKLHQRWAQLRTNFHTNLVQKLSGLKYPVH 501
>AE013599-1787|AAF58317.1| 5385|Drosophila melanogaster CG18076-PG,
isoform G protein.
Length = 5385
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 229 HIS*PHLMPSKVFERRRRQEASGHTRIPTSLSSLKHRVH 113
H+S H +K+ +R + + HT + LS LK+ VH
Sbjct: 463 HVSELHKKVNKLHQRWAQLRTNFHTNLVQKLSGLKYPVH 501
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,736,805
Number of Sequences: 53049
Number of extensions: 494081
Number of successful extensions: 1640
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1640
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1355285490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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