Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0265
         (432 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z98877-6|CAD56617.1|  432|Caenorhabditis elegans Hypothetical pr...    28   2.5  
Z98877-3|CAB54472.2|  537|Caenorhabditis elegans Hypothetical pr...    28   2.5  
Z46242-3|CAA86338.2|  680|Caenorhabditis elegans Hypothetical pr...    28   2.5  
Z46242-2|CAA86335.2|  683|Caenorhabditis elegans Hypothetical pr...    28   2.5  
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr...    27   5.8  
AF067218-1|AAC17021.1| 1451|Caenorhabditis elegans Hypothetical ...    27   5.8  

>Z98877-6|CAD56617.1|  432|Caenorhabditis elegans Hypothetical
           protein Y69H2.3d protein.
          Length = 432

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 11/35 (31%), Positives = 15/35 (42%)
 Frame = +1

Query: 241 NTASRETNRCAPCNVVCNKTHHNYDSGLCVKECQG 345
           N   R   +  PC  VC+ T  N +   C + C G
Sbjct: 367 NRRCRSNEKFEPCKTVCSDTKCNEEPRFCPQVCTG 401


>Z98877-3|CAB54472.2|  537|Caenorhabditis elegans Hypothetical
           protein Y69H2.3a protein.
          Length = 537

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 11/35 (31%), Positives = 15/35 (42%)
 Frame = +1

Query: 241 NTASRETNRCAPCNVVCNKTHHNYDSGLCVKECQG 345
           N   R   +  PC  VC+ T  N +   C + C G
Sbjct: 472 NRRCRSNEKFEPCKTVCSDTKCNEEPRFCPQVCTG 506


>Z46242-3|CAA86338.2|  680|Caenorhabditis elegans Hypothetical
           protein F35G12.4b protein.
          Length = 680

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = +2

Query: 176 ASPPL--KYLGRHQMRSADMSARRILLPGRPTDALRAMLSAIKHTIT 310
           +SPP+  KY+ R + +    S   +++PG P     AMLS  +H +T
Sbjct: 363 SSPPVTFKYI-RVKDQKGQQSTPELVIPGAPAIKKHAMLSDKRHVLT 408


>Z46242-2|CAA86335.2|  683|Caenorhabditis elegans Hypothetical
           protein F35G12.4a protein.
          Length = 683

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = +2

Query: 176 ASPPL--KYLGRHQMRSADMSARRILLPGRPTDALRAMLSAIKHTIT 310
           +SPP+  KY+ R + +    S   +++PG P     AMLS  +H +T
Sbjct: 363 SSPPVTFKYI-RVKDQKGQQSTPELVIPGAPAIKKHAMLSDKRHVLT 408


>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical protein
            F55H12.3 protein.
          Length = 2972

 Score = 27.1 bits (57), Expect = 5.8
 Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +3

Query: 162  PDAS-WRRLRSNTLDGIRCGQLICQLD 239
            PD S W R+  + +DG  C + +C+ D
Sbjct: 949  PDLSTWARIYDDLIDGYSCVETVCKYD 975


>AF067218-1|AAC17021.1| 1451|Caenorhabditis elegans Hypothetical
           protein K10E9.1 protein.
          Length = 1451

 Score = 27.1 bits (57), Expect = 5.8
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = -3

Query: 175 QEASGHTRIPTSLSSLKHRVHFRREQTQALWYVLSKFEF*LQSLQR 38
           +E SG+T  P ++++  H VHF     +    +L K  F  Q++ R
Sbjct: 547 KELSGYTLDPYTVAANVHNVHFDHINVEIYLELLKKSPFFAQNIVR 592


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,222,692
Number of Sequences: 27780
Number of extensions: 236199
Number of successful extensions: 763
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 763
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 724655464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)