Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0265
         (432 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   1.9  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   4.5  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   7.8  
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    21   7.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   7.8  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 95  CLFPAKMYTVL*RRER 142
           CLF  K+Y +L R ER
Sbjct: 896 CLFSPKLYIILIRPER 911


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
          monooxygenase protein.
          Length = 499

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 78 YFLNLNFNFKASRGLTG 28
          Y+L   F+F  SRG+ G
Sbjct: 20 YYLTSTFDFWKSRGVVG 36


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1

Query: 405 PNRWVRGRLRT 373
           PNR  RG+LRT
Sbjct: 391 PNRRARGQLRT 401


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +1

Query: 283 VVCNKTHHNYDSGLCVKECQGYLLDLR 363
           ++  K  H  +SGL V  C G  L+ R
Sbjct: 107 LIAEKVAHALESGLKVIACIGEKLEER 133


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 11/37 (29%), Positives = 14/37 (37%)
 Frame = -2

Query: 188 AEATPGSIRTHTNPDISLFSKAPCTFSQGTDTSTVVC 78
           AEA P  I  HT   + L   +P   S  +      C
Sbjct: 656 AEAEPAVIVQHTQSQLHLHLTSPPARSPSSQAQASQC 692


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,432
Number of Sequences: 438
Number of extensions: 2956
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11244597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)