Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0258
         (799 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    62   2e-08
UniRef50_Q2SJG6 Cluster: Glycosyltransferase; n=1; Hahella cheju...    33   8.3  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 62.1 bits (144), Expect = 2e-08
 Identities = 28/38 (73%), Positives = 30/38 (78%)
 Frame = +1

Query: 466 FLLLRWMDELTVHLVLSGYWSA*TSTNVNAPSTMRYKF 579
           FLLLRW+DELT HLVLSGYWS     +VNAP T RYKF
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSPRHLYDVNAPPTSRYKF 191


>UniRef50_Q2SJG6 Cluster: Glycosyltransferase; n=1; Hahella
           chejuensis KCTC 2396|Rep: Glycosyltransferase - Hahella
           chejuensis (strain KCTC 2396)
          Length = 356

 Score = 33.1 bits (72), Expect = 8.3
 Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 7/87 (8%)
 Frame = +3

Query: 507 GVKW---LLERLDIYKRKC-AIHHEI*---VLRSQYSYNGCPTLQTETNYCFTAEIGRAV 665
           GV+W      RLD++ R+  +  H I    +  S  +YN    L    +   TA  G   
Sbjct: 95  GVRWNPNSTSRLDVWFRRIESCAHRITDAYITNSAAAYNTLLKLGVPRDKLTTAYNGLDA 154

Query: 666 MPTRADSQEVLPPGPPTICRLSLRSSY 746
           MP+ ADS+   PP   TI  L+ R  Y
Sbjct: 155 MPSAADSRIQTPPVVITIANLNYRKGY 181


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 797,294,906
Number of Sequences: 1657284
Number of extensions: 16608311
Number of successful extensions: 31686
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 30745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31682
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 68319938570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)