Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0258
         (799 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT025922-1|ABG02166.1|  316|Drosophila melanogaster IP11216p pro...    29   7.4  
AY071153-1|AAL48775.1|  596|Drosophila melanogaster RE18318p pro...    29   7.4  
AE013599-2764|AAF57640.2|  596|Drosophila melanogaster CG15078-P...    29   7.4  
AE013599-2763|AAO41353.2|  929|Drosophila melanogaster CG15078-P...    29   7.4  
AE013599-2762|ABI31105.1|  940|Drosophila melanogaster CG15078-P...    29   7.4  

>BT025922-1|ABG02166.1|  316|Drosophila melanogaster IP11216p
           protein.
          Length = 316

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -3

Query: 506 RWTVSSSIHLSNKNKKLQCATWGTDDLYG 420
           RW     +HL ++++ L+ A W  + LYG
Sbjct: 238 RWLEQFDLHLFDEDQNLEIALWNRNTLYG 266


>AY071153-1|AAL48775.1|  596|Drosophila melanogaster RE18318p
           protein.
          Length = 596

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -3

Query: 506 RWTVSSSIHLSNKNKKLQCATWGTDDLYG 420
           RW     +HL ++++ L+ A W  + LYG
Sbjct: 117 RWLEQFDLHLFDEDQNLEIALWNRNTLYG 145


>AE013599-2764|AAF57640.2|  596|Drosophila melanogaster CG15078-PB,
           isoform B protein.
          Length = 596

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -3

Query: 506 RWTVSSSIHLSNKNKKLQCATWGTDDLYG 420
           RW     +HL ++++ L+ A W  + LYG
Sbjct: 117 RWLEQFDLHLFDEDQNLEIALWNRNTLYG 145


>AE013599-2763|AAO41353.2|  929|Drosophila melanogaster CG15078-PA,
           isoform A protein.
          Length = 929

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -3

Query: 506 RWTVSSSIHLSNKNKKLQCATWGTDDLYG 420
           RW     +HL ++++ L+ A W  + LYG
Sbjct: 450 RWLEQFDLHLFDEDQNLEIALWNRNTLYG 478


>AE013599-2762|ABI31105.1|  940|Drosophila melanogaster CG15078-PC,
           isoform C protein.
          Length = 940

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -3

Query: 506 RWTVSSSIHLSNKNKKLQCATWGTDDLYG 420
           RW     +HL ++++ L+ A W  + LYG
Sbjct: 461 RWLEQFDLHLFDEDQNLEIALWNRNTLYG 489


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,569,451
Number of Sequences: 53049
Number of extensions: 771272
Number of successful extensions: 1491
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1491
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)