Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0255
         (640 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    24   1.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   5.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   5.0  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   6.6  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   8.7  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   8.7  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   8.7  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   8.7  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -2

Query: 369 IFIITTHFLYVHVIFRH*FQFKYTLPYFFLF 277
           I++ T +++Y  V       F YTL  F +F
Sbjct: 151 IYLFTVYYIYYSVHEASIINFGYTLAKFMIF 181


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 541  GLPTPVAGALMMRIFVGM 488
            GL + + G +MM +FVG+
Sbjct: 947  GLISAIYGLIMMAVFVGV 964


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 541  GLPTPVAGALMMRIFVGM 488
            GL + + G +MM +FVG+
Sbjct: 947  GLISAIYGLIMMAVFVGV 964


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = -3

Query: 557 YLYECWTPYTSCGCVNDENLC 495
           Y+  C   +T   C N  NLC
Sbjct: 45  YICTCKPGFTGSNCQNRINLC 65


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -3

Query: 536 PYTSCGCVNDENLC 495
           P T+C C N  N C
Sbjct: 692 PCTTCFCENGNNKC 705


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -1

Query: 220 PFASSELAKYPGFIWTCLPMHYFHIY 143
           P    E+ +   F WT +PM Y +++
Sbjct: 70  PIQRGEIGRIT-FGWTSIPMLYAYVF 94


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -1

Query: 220 PFASSELAKYPGFIWTCLPMHYFHIY 143
           P    E+ +   F WT +PM Y +++
Sbjct: 70  PIQRGEIGRIT-FGWTSIPMLYAYVF 94


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -1

Query: 220 PFASSELAKYPGFIWTCLPMHYFHIY 143
           P    E+ +   F WT +PM Y +++
Sbjct: 70  PIQRGEIGRIT-FGWTSIPMLYAYVF 94


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,560
Number of Sequences: 336
Number of extensions: 3268
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)