Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0252
         (762 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    43   0.010
UniRef50_UPI000069E9B7 Cluster: UPI000069E9B7 related cluster; n...    36   0.83 
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    36   1.1  
UniRef50_Q8SX83 Cluster: Protein split ends; n=10; Eukaryota|Rep...    33   7.7  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 42.7 bits (96), Expect = 0.010
 Identities = 17/29 (58%), Positives = 19/29 (65%)
 Frame = +2

Query: 203 RRYCXXXXXXXSWVDELTVHLVLSGSWSP 289
           +R+C        WVDELT HLVLSG WSP
Sbjct: 147 KRFCLSRFLLLRWVDELTAHLVLSGYWSP 175


>UniRef50_UPI000069E9B7 Cluster: UPI000069E9B7 related cluster; n=1;
           Xenopus tropicalis|Rep: UPI000069E9B7 UniRef100 entry -
           Xenopus tropicalis
          Length = 370

 Score = 36.3 bits (80), Expect = 0.83
 Identities = 18/45 (40%), Positives = 25/45 (55%)
 Frame = +1

Query: 28  IKGEPGKPSTEPLPAALRPETAEVNYRPPGRSGQPLRNSLHRGQN 162
           IKG+PG P ++ LP +L       N  PPG+ G P  N   +G+N
Sbjct: 128 IKGDPGPPGSQGLPGSLGTPGLRGNTGPPGKVG-PKGNQGDKGEN 171


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 35.9 bits (79), Expect = 1.1
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = +1

Query: 412 ARWWYLPVRTYMRSYH 459
           A WWYLP RT+ RSYH
Sbjct: 569 AEWWYLPARTHKRSYH 584


>UniRef50_Q8SX83 Cluster: Protein split ends; n=10; Eukaryota|Rep:
            Protein split ends - Drosophila melanogaster (Fruit fly)
          Length = 5560

 Score = 33.1 bits (72), Expect = 7.7
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +1

Query: 19   GVFIKGEPGKPSTEPLPAALRPETAEVNYRPPGRSGQPLRNSLHRGQ 159
            G+ +   PG    + LPA L+P+  ++N  PP     P+ + L  GQ
Sbjct: 5053 GIIMPTHPGMLLQQKLPAHLQPQQHQLNPSPPPGKPNPVLHGLQSGQ 5099


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 775,738,105
Number of Sequences: 1657284
Number of extensions: 15448815
Number of successful extensions: 37500
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 35812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37482
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63381147830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)