Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0252
         (762 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends l...    33   0.43 
AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP mot...    33   0.43 
AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends p...    33   0.43 
AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,...    33   0.43 
AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,...    33   0.43 
AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,...    33   0.43 
AY094716-1|AAM11069.1| 1688|Drosophila melanogaster GH16393p pro...    29   6.9  
AE014297-2048|AAF55199.3| 1537|Drosophila melanogaster CG14869-P...    29   6.9  
AE014297-2047|AAS65157.1| 1688|Drosophila melanogaster CG14869-P...    29   6.9  

>AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends long
            isoform protein.
          Length = 5554

 Score = 33.1 bits (72), Expect = 0.43
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +1

Query: 19   GVFIKGEPGKPSTEPLPAALRPETAEVNYRPPGRSGQPLRNSLHRGQ 159
            G+ +   PG    + LPA L+P+  ++N  PP     P+ + L  GQ
Sbjct: 5047 GIIMPTHPGMLLQQKLPAHLQPQQHQLNPSPPPGKPNPVLHGLQSGQ 5093


>AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP motif
            protein long isoformprotein.
          Length = 5533

 Score = 33.1 bits (72), Expect = 0.43
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +1

Query: 19   GVFIKGEPGKPSTEPLPAALRPETAEVNYRPPGRSGQPLRNSLHRGQ 159
            G+ +   PG    + LPA L+P+  ++N  PP     P+ + L  GQ
Sbjct: 5053 GIIMPTHPGMLLQQKLPAHLQPQQHQLNPSPPPGKPNPVLHGLQSGQ 5099


>AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends
            protein.
          Length = 5476

 Score = 33.1 bits (72), Expect = 0.43
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +1

Query: 19   GVFIKGEPGKPSTEPLPAALRPETAEVNYRPPGRSGQPLRNSLHRGQ 159
            G+ +   PG    + LPA L+P+  ++N  PP     P+ + L  GQ
Sbjct: 4996 GIIMPTHPGMLLQQKLPAHLQPQQHQLNPSPPPGKPNPVLHGLQSGQ 5042


>AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,
            isoform C protein.
          Length = 5476

 Score = 33.1 bits (72), Expect = 0.43
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +1

Query: 19   GVFIKGEPGKPSTEPLPAALRPETAEVNYRPPGRSGQPLRNSLHRGQ 159
            G+ +   PG    + LPA L+P+  ++N  PP     P+ + L  GQ
Sbjct: 4996 GIIMPTHPGMLLQQKLPAHLQPQQHQLNPSPPPGKPNPVLHGLQSGQ 5042


>AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,
            isoform B protein.
          Length = 5533

 Score = 33.1 bits (72), Expect = 0.43
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +1

Query: 19   GVFIKGEPGKPSTEPLPAALRPETAEVNYRPPGRSGQPLRNSLHRGQ 159
            G+ +   PG    + LPA L+P+  ++N  PP     P+ + L  GQ
Sbjct: 5053 GIIMPTHPGMLLQQKLPAHLQPQQHQLNPSPPPGKPNPVLHGLQSGQ 5099


>AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,
            isoform A protein.
          Length = 5560

 Score = 33.1 bits (72), Expect = 0.43
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +1

Query: 19   GVFIKGEPGKPSTEPLPAALRPETAEVNYRPPGRSGQPLRNSLHRGQ 159
            G+ +   PG    + LPA L+P+  ++N  PP     P+ + L  GQ
Sbjct: 5053 GIIMPTHPGMLLQQKLPAHLQPQQHQLNPSPPPGKPNPVLHGLQSGQ 5099


>AY094716-1|AAM11069.1| 1688|Drosophila melanogaster GH16393p protein.
          Length = 1688

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = +3

Query: 363  CPAFQAKKHYCFTAEIGAVVVPTRA--DLHEVLPP 461
            C   + ++ +CF +  G +  PTRA  + H   PP
Sbjct: 1419 CEGVEKRRDFCFNSHKGRIACPTRARVERHSCTPP 1453


>AE014297-2048|AAF55199.3| 1537|Drosophila melanogaster CG14869-PA,
            isoform A protein.
          Length = 1537

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = +3

Query: 363  CPAFQAKKHYCFTAEIGAVVVPTRA--DLHEVLPP 461
            C   + ++ +CF +  G +  PTRA  + H   PP
Sbjct: 1268 CEGVEKRRDFCFNSHKGRIACPTRARVERHSCTPP 1302


>AE014297-2047|AAS65157.1| 1688|Drosophila melanogaster CG14869-PB,
            isoform B protein.
          Length = 1688

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = +3

Query: 363  CPAFQAKKHYCFTAEIGAVVVPTRA--DLHEVLPP 461
            C   + ++ +CF +  G +  PTRA  + H   PP
Sbjct: 1419 CEGVEKRRDFCFNSHKGRIACPTRARVERHSCTPP 1453


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,548,285
Number of Sequences: 53049
Number of extensions: 718725
Number of successful extensions: 1827
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1827
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3499501170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)