Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0252
         (762 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            25   1.0  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   2.3  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   2.3  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   2.3  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   9.4  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   9.4  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   9.4  

>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -1

Query: 381 WLERRGSRCNYTEILQLISQGGRRIYV 301
           W+ R G+R  + +++   ++ G RIYV
Sbjct: 87  WITRSGTREQFIDMVARCNKAGVRIYV 113


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +1

Query: 196 TLKKVLFTFFFIA*LGGRAHSPPGVKW 276
           TLK+VL T   +  L G   SPP   W
Sbjct: 149 TLKRVLATIAGVWILSGAISSPPLAGW 175


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +1

Query: 196 TLKKVLFTFFFIA*LGGRAHSPPGVKW 276
           TLK+VL T   +  L G   SPP   W
Sbjct: 149 TLKRVLATIAGVWILSGAISSPPLAGW 175


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +1

Query: 196 TLKKVLFTFFFIA*LGGRAHSPPGVKW 276
           TLK+VL T   +  L G   SPP   W
Sbjct: 149 TLKRVLATIAGVWILSGAISSPPLAGW 175


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -2

Query: 485 LNEANKTKWW*DLM 444
           L E  K  WW D+M
Sbjct: 333 LGEEEKADWWKDIM 346


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -2

Query: 485 LNEANKTKWW*DLM 444
           L E  K  WW D+M
Sbjct: 333 LGEEEKADWWKDIM 346


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -2

Query: 485 LNEANKTKWW*DLM 444
           L E  K  WW D+M
Sbjct: 333 LGEEEKADWWKDIM 346


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,480
Number of Sequences: 438
Number of extensions: 4533
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)