Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0250
         (432 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113312-1|AAM29317.1|  515|Drosophila melanogaster AT27794p pro...    28   4.7  
AY682915-1|AAT81589.1| 1473|Drosophila melanogaster myocardin-re...    28   6.2  
AE014296-506|AAF47681.2| 1473|Drosophila melanogaster CG32296-PA...    28   6.2  

>AY113312-1|AAM29317.1|  515|Drosophila melanogaster AT27794p
           protein.
          Length = 515

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 18/67 (26%), Positives = 35/67 (52%)
 Frame = +3

Query: 84  CHANITEGLQRSSNLSQDLEPSLIAPMLN*VLYMF*SRHGLKDKT*GSPCNYT*DLRTYI 263
           CHA+  +    + NL +DL PSL  P +N +L    S + L +   G+  ++  D  +++
Sbjct: 339 CHASAAKSSNNNGNLRRDLNPSL-QPSINELLDASSSDNVLLNNNTGADVDF--DADSFV 395

Query: 264 SRWVAHL 284
           ++   H+
Sbjct: 396 AQLSQHV 402


>AY682915-1|AAT81589.1| 1473|Drosophila melanogaster myocardin-related
            transcriptionfactor protein.
          Length = 1473

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 84   CHANITEGLQRSSNLSQDLEPSLIAPMLN*VL 179
            CHA+  +    + NL +DL PSL  P +N +L
Sbjct: 1297 CHASAAKSSNNNGNLRRDLNPSL-QPSINELL 1327


>AE014296-506|AAF47681.2| 1473|Drosophila melanogaster CG32296-PA
            protein.
          Length = 1473

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 84   CHANITEGLQRSSNLSQDLEPSLIAPMLN*VL 179
            CHA+  +    + NL +DL PSL  P +N +L
Sbjct: 1297 CHASAAKSSNNNGNLRRDLNPSL-QPSINELL 1327


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,165,856
Number of Sequences: 53049
Number of extensions: 358187
Number of successful extensions: 621
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 621
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1355285490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)