Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0249
(672 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;... 113 5e-24
UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11; ... 112 8e-24
UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3; M... 109 6e-23
UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10... 101 2e-20
UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27... 100 4e-20
UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2; D... 87 5e-16
UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1; E... 82 1e-14
UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4; E... 81 2e-14
UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1; E... 78 2e-13
UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;... 77 5e-13
UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14; ... 77 5e-13
UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2; T... 73 6e-12
UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12; ... 73 8e-12
UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6; T... 72 1e-11
UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1; G... 68 2e-10
UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6; P... 67 3e-10
UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1; G... 64 4e-09
UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protei... 63 7e-09
UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=... 61 2e-08
UniRef50_A6NF45 Cluster: Uncharacterized protein ENSP00000366648... 60 6e-08
UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiell... 56 1e-06
UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyc... 53 7e-06
UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum... 51 3e-05
UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=... 50 5e-05
UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1; Methan... 49 9e-05
UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=... 48 2e-04
UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga ... 47 4e-04
UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum... 47 4e-04
UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=... 46 0.001
UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4; Methanomicr... 45 0.002
UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1; Staphylothe... 44 0.003
UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;... 42 0.014
UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus ... 40 0.072
UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:... 39 0.13
UniRef50_Q9Y9W8 Cluster: Acidic ribosomal protein P0 homolog; n=... 39 0.13
UniRef50_Q9UKD2 Cluster: mRNA turnover protein 4 homolog; n=30; ... 38 0.29
UniRef50_A7I648 Cluster: Putative uncharacterized protein; n=1; ... 33 4.8
>UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo
sapiens (Human)
Length = 317
Score = 113 bits (271), Expect = 5e-24
Identities = 52/73 (71%), Positives = 65/73 (89%)
Frame = -2
Query: 671 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 492
QAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I
Sbjct: 139 QALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSI 198
Query: 491 FAPEILDIKPEDL 453
+ PE+LDI E L
Sbjct: 199 YNPEVLDITEETL 211
Score = 64.5 bits (150), Expect = 2e-09
Identities = 38/105 (36%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = -3
Query: 448 AKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDP 269
++F GV NVA++ L IGYPT+AS PHSI NG+K +L +K F+ DP
Sbjct: 213 SRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADP 272
Query: 268 SKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXETDDDMGFGLFD 137
S F E+D+DMGFGLFD
Sbjct: 273 SAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 319
Score = 112 bits (269), Expect = 8e-24
Identities = 52/76 (68%), Positives = 67/76 (88%), Gaps = 3/76 (3%)
Frame = -2
Query: 671 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATL---LNMLNISPFSYGLVVKQVYDS 501
QAL I TKIS+GTIEI++DV ++KPGDKVGASEATL LNMLNISPFSYGL+++QVYD+
Sbjct: 139 QALGITTKISRGTIEILSDVQLIKPGDKVGASEATLLNMLNMLNISPFSYGLIIQQVYDN 198
Query: 500 GTIFAPEILDIKPEDL 453
G++++PE+LDI + L
Sbjct: 199 GSVYSPEVLDITEDAL 214
Score = 63.7 bits (148), Expect = 4e-09
Identities = 34/103 (33%), Positives = 48/103 (46%)
Frame = -3
Query: 445 KFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPS 266
+F GV N+A++ L IGYPT+AS PH+I NG+K +L +K ++ DP+
Sbjct: 217 RFLKGVRNIASVCLQIGYPTLASIPHTIINGYKRVLAVTVETDYTFPLAEKVKAYLADPT 276
Query: 265 KFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETDDDMGFGLFD 137
F E+D+DMGFGLFD
Sbjct: 277 AFAVAAPVAAATEQKSAAPAAKEEAPKEDSEESDEDMGFGLFD 319
>UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3;
Metazoa|Rep: 60S acidic ribosomal protein P0 - Suberites
domuncula (Sponge)
Length = 313
Score = 109 bits (262), Expect = 6e-23
Identities = 51/73 (69%), Positives = 63/73 (86%)
Frame = -2
Query: 671 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 492
QALSI TKIS+GTIEI+++VH++K G+KVGASEATLL ML I PF+YGL + QVYDSG++
Sbjct: 139 QALSIATKISRGTIEILSEVHLIKIGEKVGASEATLLQMLKIFPFTYGLKIVQVYDSGSV 198
Query: 491 FAPEILDIKPEDL 453
FAP ILDI +DL
Sbjct: 199 FAPSILDITEDDL 211
Score = 76.2 bits (179), Expect = 7e-13
Identities = 44/103 (42%), Positives = 51/103 (49%)
Frame = -3
Query: 445 KFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPS 266
+F +G+ANVAA+SL IGYPT+AS PHSI NGFKNLL K F+ DPS
Sbjct: 214 QFMSGLANVAAVSLQIGYPTVASVPHSIVNGFKNLLAVAVATDITFKEAEQAKAFVADPS 273
Query: 265 KFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETDDDMGFGLFD 137
F E+DDDMGFGLFD
Sbjct: 274 AF---AALVPAAQEDKKEDDKAAAAAEESEEESDDDMGFGLFD 313
>UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P0-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 323
Score = 101 bits (241), Expect = 2e-20
Identities = 45/73 (61%), Positives = 59/73 (80%)
Frame = -2
Query: 671 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 492
Q L+IPTKI+KGT+EII V ++K GDKVG+SEA LL L I PFSYGLVV+ VYD+G++
Sbjct: 141 QVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFSYGLVVQSVYDNGSV 200
Query: 491 FAPEILDIKPEDL 453
F+PE+LD+ + L
Sbjct: 201 FSPEVLDLTEDQL 213
Score = 60.9 bits (141), Expect = 3e-08
Identities = 27/62 (43%), Positives = 38/62 (61%)
Frame = -3
Query: 445 KFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPS 266
KF +G++ V +L+LA+ YPT+A+APH N +KN L +KEF+KDPS
Sbjct: 216 KFASGISMVTSLALAVSYPTLAAAPHMFINAYKNALAIAVATDYTFPQAEKVKEFLKDPS 275
Query: 265 KF 260
KF
Sbjct: 276 KF 277
>UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27;
Eukaryota|Rep: 60S acidic ribosomal protein P0-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 317
Score = 100 bits (239), Expect = 4e-20
Identities = 45/73 (61%), Positives = 59/73 (80%)
Frame = -2
Query: 671 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 492
Q L+IPTKI+KGT+EII V ++K GDKVG+SEA LL L I PFSYGLVV+ VYD+G++
Sbjct: 142 QVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVESVYDNGSV 201
Query: 491 FAPEILDIKPEDL 453
F PE+L++ +DL
Sbjct: 202 FNPEVLNLTEDDL 214
Score = 64.9 bits (151), Expect = 2e-09
Identities = 30/62 (48%), Positives = 39/62 (62%)
Frame = -3
Query: 445 KFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPS 266
KF AGV+ + ALSLAI YPT+A+APH N +KN+L +KEF+KDP+
Sbjct: 217 KFAAGVSMITALSLAISYPTVAAAPHMFLNAYKNVLAVALATEYSFPQAENVKEFLKDPT 276
Query: 265 KF 260
KF
Sbjct: 277 KF 278
>UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2;
Dictyostelium discoideum|Rep: 60S acidic ribosomal
protein P0 - Dictyostelium discoideum (Slime mold)
Length = 305
Score = 86.6 bits (205), Expect = 5e-16
Identities = 39/65 (60%), Positives = 50/65 (76%)
Frame = -2
Query: 671 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 492
Q L I TKI++G I+I+N+VHI+K G KVGASEATLL LNI PF+YGL K +YD+G
Sbjct: 138 QDLKIATKINRGQIDIVNEVHIIKTGQKVGASEATLLQKLNIKPFTYGLEPKIIYDAGAC 197
Query: 491 FAPEI 477
++P I
Sbjct: 198 YSPSI 202
Score = 58.4 bits (135), Expect = 1e-07
Identities = 24/36 (66%), Positives = 30/36 (83%)
Frame = -3
Query: 445 KFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLL 338
KF+ G+ N+AA+SL IGYPT+AS PHS+ N FKNLL
Sbjct: 210 KFKQGIFNIAAISLEIGYPTVASIPHSVMNAFKNLL 245
>UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1;
Encephalitozoon cuniculi|Rep: 60S ACIDIC RIBOSOMAL
PROTEIN P0 - Encephalitozoon cuniculi
Length = 290
Score = 82.2 bits (194), Expect = 1e-14
Identities = 37/73 (50%), Positives = 50/73 (68%)
Frame = -2
Query: 671 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 492
QAL I TKI+KG +EII+ +L GDKVG S+A LL MLNI PF Y + + Q+Y+ G I
Sbjct: 161 QALGIATKITKGKVEIISPYKVLSEGDKVGPSQANLLGMLNIKPFCYKMTMHQIYEDGVI 220
Query: 491 FAPEILDIKPEDL 453
+ ++DI ED+
Sbjct: 221 YDSSLIDIGEEDI 233
>UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4;
Euplotes|Rep: 60S acidic ribosomal protein P0 - Euplotes
minuta
Length = 333
Score = 81.0 bits (191), Expect = 2e-14
Identities = 38/73 (52%), Positives = 51/73 (69%)
Frame = -2
Query: 671 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 492
Q L+IPTKI+K IEI D I+ G+KVG++EA LL LNI+PFSY L V V+D+G +
Sbjct: 157 QNLAIPTKIAKAQIEISADKQIITEGEKVGSNEAALLQKLNINPFSYKLSVAHVFDNGNV 216
Query: 491 FAPEILDIKPEDL 453
+ P +LDI E +
Sbjct: 217 YGPGVLDITSESI 229
Score = 42.3 bits (95), Expect = 0.010
Identities = 20/31 (64%), Positives = 24/31 (77%)
Frame = -3
Query: 430 VANVAALSLAIGYPTIASAPHSIANGFKNLL 338
++NVA++SL G PT ASAPHSI FKNLL
Sbjct: 237 ISNVASVSLESGIPTRASAPHSIMRVFKNLL 267
>UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1;
Eufolliculina uhligi|Rep: 60S acidic ribosomal protein
P0 - Eufolliculina uhligi
Length = 324
Score = 78.2 bits (184), Expect = 2e-13
Identities = 35/68 (51%), Positives = 50/68 (73%)
Frame = -2
Query: 671 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 492
QAL I TKI KG I+I+N++H++ KVG SEA LL L + PFS+GL VK VYD+G++
Sbjct: 149 QALGIFTKIVKGQIDIVNELHLIFKDKKVGNSEAVLLKKLGVKPFSFGLKVKNVYDNGSV 208
Query: 491 FAPEILDI 468
++ E+L +
Sbjct: 209 YSAEVLKL 216
Score = 58.8 bits (136), Expect = 1e-07
Identities = 29/61 (47%), Positives = 36/61 (59%)
Frame = -3
Query: 445 KFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPS 266
KF GV N+AA+SL +G PT ASAPHSI +GFKNL+ + +KDPS
Sbjct: 224 KFMNGVRNIAAMSLTLGIPTAASAPHSIVSGFKNLVSIAHVVDYTFSQAEGLLAVLKDPS 283
Query: 265 K 263
K
Sbjct: 284 K 284
>UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P0 - Entamoeba histolytica HM-1:IMSS
Length = 316
Score = 76.6 bits (180), Expect = 5e-13
Identities = 34/73 (46%), Positives = 51/73 (69%)
Frame = -2
Query: 671 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 492
QAL+I +KI+KG IEI ++ ++K G+KVG S+A LL L I+PF YG V+ VYD+G +
Sbjct: 146 QALNIASKITKGQIEITSETLLIKEGEKVGVSQAVLLQKLKINPFKYGAVIDVVYDNGIV 205
Query: 491 FAPEILDIKPEDL 453
+ + LD+ D+
Sbjct: 206 YDAKALDLTESDI 218
Score = 37.9 bits (84), Expect = 0.22
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = -3
Query: 445 KFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLL 338
KFQ GV A+SLA PT A+ PH + N F+ LL
Sbjct: 221 KFQEGVQAATAISLAANLPTEAACPHLMLNAFQALL 256
>UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14;
Apicomplexa|Rep: 60S acidic ribosomal protein P0 -
Plasmodium falciparum (isolate 7G8)
Length = 316
Score = 76.6 bits (180), Expect = 5e-13
Identities = 38/73 (52%), Positives = 51/73 (69%)
Frame = -2
Query: 671 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 492
++L I TKI KG IEI VH++K G+KV AS ATLL N++P SYG+ V+ VYD G I
Sbjct: 140 ESLGISTKIVKGQIEIQEHVHLIKQGEKVTASSATLLRKFNMNP-SYGVDVRTVYDDGVI 198
Query: 491 FAPEILDIKPEDL 453
+ ++LDI ED+
Sbjct: 199 YDAKVLDITDEDI 211
Score = 47.2 bits (107), Expect = 4e-04
Identities = 31/103 (30%), Positives = 41/103 (39%)
Frame = -3
Query: 445 KFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPS 266
KF GV+NVAALS A G T AS PH FKN++ +K+++++P
Sbjct: 214 KFSKGVSNVAALSRATGVITEASYPHVFVEAFKNIVALIIDSDYTFPLMKILKKWVENPE 273
Query: 265 KFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETDDDMGFGLFD 137
F E D MGFG+FD
Sbjct: 274 AFAAVAAPASAAKADEPKKEEAKKVEEEEEEEEDGFMGFGMFD 316
>UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2;
Tetrahymena thermophila|Rep: 60S acidic ribosomal
protein P0 - Tetrahymena thermophila SB210
Length = 324
Score = 72.9 bits (171), Expect = 6e-12
Identities = 35/69 (50%), Positives = 43/69 (62%)
Frame = -2
Query: 668 ALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIF 489
ALSI TKI KG IEI +V + G K+G SE +LL +NI PFSYG+ YD+G I
Sbjct: 158 ALSISTKIQKGQIEITKEVQVCTKGKKIGNSEVSLLEKMNIQPFSYGMKCFSDYDNGEIL 217
Query: 488 APEILDIKP 462
E+L I P
Sbjct: 218 TEEVLSISP 226
Score = 37.1 bits (82), Expect = 0.39
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -3
Query: 442 FQAGVANVAALSLAIGYPTIASAPHSIANGFKNL 341
F +AA+SLA GY T S PH I N FK+L
Sbjct: 233 FAQNTLRIAAVSLATGYVTAPSVPHFIQNAFKDL 266
>UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12;
Trypanosomatidae|Rep: 60S acidic ribosomal protein P0 -
Trypanosoma cruzi
Length = 323
Score = 72.5 bits (170), Expect = 8e-12
Identities = 36/68 (52%), Positives = 48/68 (70%)
Frame = -2
Query: 671 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 492
QAL+I TKI+KGT+EI++D +L GD+V S ATLL L+ISPF Y + V+ V+D G +
Sbjct: 146 QALNIATKIAKGTVEIVSDKKVLSVGDRVDNSTATLLQKLDISPFYYQVEVQSVWDRGML 205
Query: 491 FAPEILDI 468
F E L I
Sbjct: 206 FLREDLSI 213
Score = 42.7 bits (96), Expect = 0.008
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = -3
Query: 433 GVANVAALSLAIGYPTIASAPHSIANGFKNLL 338
G++NVAALSL G PT A+ PH I + FK LL
Sbjct: 225 GISNVAALSLGAGIPTAATLPHMIMDAFKTLL 256
>UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6;
Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P0 - Trichomonas vaginalis G3
Length = 318
Score = 72.1 bits (169), Expect = 1e-11
Identities = 36/72 (50%), Positives = 47/72 (65%)
Frame = -2
Query: 668 ALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIF 489
AL+I KI KGTIEI + ++ G KVGASEA +LN+L I PF Y L ++ +YD G ++
Sbjct: 142 ALNIQCKIFKGTIEITGEKQLIWEGQKVGASEANILNILGIMPFKYTLKIEALYDHGNMY 201
Query: 488 APEILDIKPEDL 453
P IL I E L
Sbjct: 202 DPSILAITEEVL 213
Score = 46.8 bits (106), Expect = 5e-04
Identities = 18/41 (43%), Positives = 29/41 (70%)
Frame = -3
Query: 463 QKISRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNL 341
+++ KF+ G+ NV L+LA+GYP ASAPH + + FK++
Sbjct: 210 EEVLGEKFRTGLRNVTGLALAVGYPCAASAPHLVGSAFKDI 250
>UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1;
Giardia lamblia ATCC 50803|Rep: 60S acidic ribosomal
protein P0 - Giardia lamblia ATCC 50803
Length = 326
Score = 68.1 bits (159), Expect = 2e-10
Identities = 33/67 (49%), Positives = 43/67 (64%)
Frame = -2
Query: 668 ALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIF 489
AL I TKI+KG IEI+N V+++K GD V S ATLL L I PF Y + +YD G I+
Sbjct: 141 ALGIDTKINKGKIEIVNPVNLIKKGDIVTPSHATLLQRLEIDPFFYAMSALNLYDDGEIY 200
Query: 488 APEILDI 468
+L+I
Sbjct: 201 DAAVLEI 207
>UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6;
Paramecium tetraurelia|Rep: 60S acidic ribosomal protein
P0 - Paramecium tetraurelia
Length = 323
Score = 67.3 bits (157), Expect = 3e-10
Identities = 33/72 (45%), Positives = 43/72 (59%)
Frame = -2
Query: 668 ALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIF 489
AL IPTKI KG I+I D +LK G KVG S+A LL L PF YG+ V YD+G+I
Sbjct: 158 ALQIPTKIEKGQIQITKDFVVLKTGQKVGQSQAVLLQKLGKKPFLYGMEVLACYDNGSIL 217
Query: 488 APEILDIKPEDL 453
+ + + D+
Sbjct: 218 NKQQVSVNLNDI 229
Score = 41.5 bits (93), Expect = 0.018
Identities = 20/36 (55%), Positives = 26/36 (72%)
Frame = -3
Query: 448 AKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNL 341
AKFQ V NV+A+SL G+ ASAP+ +AN FK+L
Sbjct: 231 AKFQQNVRNVSAISLQNGWVNEASAPYLLANAFKDL 266
>UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1;
Guillardia theta|Rep: 60S acidic ribosomal protein P0 -
Guillardia theta (Cryptomonas phi)
Length = 297
Score = 63.7 bits (148), Expect = 4e-09
Identities = 30/67 (44%), Positives = 44/67 (65%)
Frame = -2
Query: 671 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 492
Q+L+IPTKI KG IEII + +L+ G K+ +EATLL LNI PF + + Y++G
Sbjct: 138 QSLNIPTKILKGQIEIITNFKVLEKGKKINEAEATLLQKLNILPFYNEIKIISFYENGKS 197
Query: 491 FAPEILD 471
+ P +L+
Sbjct: 198 YDPSVLN 204
>UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protein;
n=2; Culicidae|Rep: Temporarily assignedprotein name
protein - Aedes aegypti (Yellowfever mosquito)
Length = 1309
Score = 62.9 bits (146), Expect = 7e-09
Identities = 28/38 (73%), Positives = 33/38 (86%)
Frame = -3
Query: 451 RAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLL 338
RAKFQ GVAN+A +SL IGYPT+AS PH+IA GF+NLL
Sbjct: 786 RAKFQVGVANLAGVSLEIGYPTLASVPHNIAIGFRNLL 823
Score = 59.3 bits (137), Expect = 8e-08
Identities = 40/72 (55%), Positives = 45/72 (62%)
Frame = -2
Query: 668 ALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIF 489
ALSIP KISKGTIEIINDV ILK GDK ++QVY G+IF
Sbjct: 738 ALSIPIKISKGTIEIINDVPILKSGDK----------------------IEQVY--GSIF 773
Query: 488 APEILDIKPEDL 453
+P+ILDIKPEDL
Sbjct: 774 SPDILDIKPEDL 785
>UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=8;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Pyrococcus horikoshii
Length = 342
Score = 61.3 bits (142), Expect = 2e-08
Identities = 28/72 (38%), Positives = 41/72 (56%)
Frame = -2
Query: 671 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 492
QAL IP +I KG + I D +LK G+ + A +LN L I P GL V VY+ G +
Sbjct: 141 QALGIPARIEKGKVTIQKDTTVLKAGEVITPELANILNALGIQPLEVGLDVLAVYEDGIV 200
Query: 491 FAPEILDIKPED 456
+ P++L I ++
Sbjct: 201 YTPDVLAIDEQE 212
>UniRef50_A6NF45 Cluster: Uncharacterized protein ENSP00000366648;
n=12; Gnathostomata|Rep: Uncharacterized protein
ENSP00000366648 - Homo sapiens (Human)
Length = 99
Score = 59.7 bits (138), Expect = 6e-08
Identities = 36/99 (36%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Frame = -3
Query: 430 VANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XX 254
V NVA++ L IGYPT+AS PHSI NG+K +L +K F+ DPS F
Sbjct: 1 VRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAA 60
Query: 253 XXXXXXXXXXXXXXXXXXXXXXXXXXXETDDDMGFGLFD 137
E+D+DMGFGLFD
Sbjct: 61 APVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 99
>UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiella
natans|Rep: Ribosomal protein L10 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 251
Score = 55.6 bits (128), Expect = 1e-06
Identities = 27/73 (36%), Positives = 43/73 (58%)
Frame = -2
Query: 671 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 492
QAL IPT+ISK +IEII D+ ++ + S+ LL L+I P YG+ +K+++ S
Sbjct: 134 QALGIPTRISKSSIEIIEDILLVSKNQALNKSQEVLLKKLDIKPHKYGVKIKKIFSSKGE 193
Query: 491 FAPEILDIKPEDL 453
+IL + +L
Sbjct: 194 INLKILQMNNNNL 206
>UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyces
cerevisiae YLR339CP; n=1; Kluyveromyces lactis|Rep:
Similarities with sp|O94085 Saccharomyces cerevisiae
YLR339CP - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 309
Score = 52.8 bits (121), Expect = 7e-06
Identities = 24/68 (35%), Positives = 46/68 (67%)
Frame = +3
Query: 468 DVQNFRCKNSSRIIYLLNNKTI*EWRDVQHVEKGGFRSSNLVTGLQDVYIVDDFNSTL*N 647
D+Q+ ++ + ++ L + +T+ EWR+VQ V++ FRS++ +T + D+ + D+FN T N
Sbjct: 121 DIQDGSWEDLTVVVNLNDGQTVGEWRNVQQVQQRSFRSTDSLTSVNDLNVRDNFNGTSGN 180
Query: 648 LGRDRKSL 671
LG + +SL
Sbjct: 181 LGWNTQSL 188
>UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L10 - Thermofilum
pendens (strain Hrk 5)
Length = 294
Score = 50.8 bits (116), Expect = 3e-05
Identities = 22/66 (33%), Positives = 38/66 (57%)
Frame = -2
Query: 665 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 486
L IPT++ +G+I I D + KPGD + A LL+ L + P L +K +Y G + +
Sbjct: 147 LGIPTRVQEGSIWIAKDTVVAKPGDVISPELAELLSKLGLKPIESKLQIKTIYLDGKVVS 206
Query: 485 PEILDI 468
P+ +++
Sbjct: 207 PKDVEL 212
>UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Archaea|Rep: Acidic ribosomal protein P0 homolog -
Methanosarcina mazei (Methanosarcina frisia)
Length = 347
Score = 50.0 bits (114), Expect = 5e-05
Identities = 24/68 (35%), Positives = 36/68 (52%)
Frame = -2
Query: 671 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 492
Q+ IP I G + + + K G+ V AT+L+ L I P GL ++ YD GTI
Sbjct: 142 QSAGIPASIDAGKVAVKETKVVCKAGEAVPQKLATMLSKLEIYPLIVGLDLRAAYDDGTI 201
Query: 491 FAPEILDI 468
+ PE+L +
Sbjct: 202 YEPELLAV 209
>UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 50S ribosomal
protein L10P - Methanosphaera stadtmanae (strain DSM
3091)
Length = 332
Score = 49.2 bits (112), Expect = 9e-05
Identities = 23/72 (31%), Positives = 40/72 (55%)
Frame = -2
Query: 671 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 492
Q + IP KI KG+I + +D I+ G+++ + A +L L I P G+ + V + TI
Sbjct: 136 QQVGIPAKIDKGSIVVTDDAKIVDEGEEIPKAVADILTKLEIHPMEVGIDLLAVCEGDTI 195
Query: 491 FAPEILDIKPED 456
+ ++L I E+
Sbjct: 196 YTADVLAIDEEE 207
>UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=1;
Archaeoglobus fulgidus|Rep: Acidic ribosomal protein P0
homolog - Archaeoglobus fulgidus
Length = 339
Score = 48.0 bits (109), Expect = 2e-04
Identities = 26/71 (36%), Positives = 34/71 (47%)
Frame = -2
Query: 671 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 492
Q +P I KG + + ++K G+ V A L L+I P GL VK + DSG I
Sbjct: 139 QMAGLPVAIEKGKVVVKATTTVVKAGEVVRPEVARALERLDIKPIKIGLDVKAMLDSGVI 198
Query: 491 FAPEILDIKPE 459
PE L I E
Sbjct: 199 LTPETLAIDTE 209
>UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L10 -
Caldivirga maquilingensis IC-167
Length = 303
Score = 47.2 bits (107), Expect = 4e-04
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = -2
Query: 665 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQV-YDSGTIF 489
L IPT+I G I + D + KPGD V A LL ++N+ P L VK V ++ I
Sbjct: 153 LKIPTQIRDGKIWVARDTQVAKPGDTVTPELADLLRLINVKPVYESLKVKAVLLNAKYII 212
Query: 488 APE--ILDIKP-EDLPCQVPSW 432
E +D+K ED+ Q SW
Sbjct: 213 KGEELAIDVKAYEDMFKQAASW 234
>UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L10 - Cenarchaeum
symbiosum
Length = 274
Score = 47.2 bits (107), Expect = 4e-04
Identities = 24/67 (35%), Positives = 37/67 (55%)
Frame = -2
Query: 659 IPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPE 480
IPTKI +GTI I+ D +K G+ +G A LL L+I P + ++ + G I++ E
Sbjct: 130 IPTKIDQGTIWILKDTTPVKKGEPIGDKLAPLLGKLDIKPVEAVIALESALEEGVIYSRE 189
Query: 479 ILDIKPE 459
L + E
Sbjct: 190 DLAVDVE 196
>UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Sulfolobaceae|Rep: Acidic ribosomal protein P0 homolog -
Sulfolobus solfataricus
Length = 338
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/69 (30%), Positives = 32/69 (46%)
Frame = -2
Query: 665 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 486
L + TK+ G + ++ D + KPGD + A +L L I P L +K Y G +
Sbjct: 146 LKVQTKVQDGKVHVVKDTVVAKPGDVIPAEALPILQKLGIMPVYVKLKIKVAYHEGLVIP 205
Query: 485 PEILDIKPE 459
E L + E
Sbjct: 206 AESLKLDLE 214
>UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4;
Methanomicrobiales|Rep: Ribosomal protein L10 -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 346
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/71 (30%), Positives = 35/71 (49%)
Frame = -2
Query: 671 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 492
Q + IP I G ++I ++K G+ + A L L + P GL+++ Y TI
Sbjct: 139 QQVGIPAAIEGGKVKIRETKTVVKKGEVINKKVAEALVKLGVKPMDVGLILQAAYYRETI 198
Query: 491 FAPEILDIKPE 459
F P++L I E
Sbjct: 199 FTPDLLAIDEE 209
>UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1;
Staphylothermus marinus F1|Rep: Ribosomal protein L10 -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 338
Score = 44.0 bits (99), Expect = 0.003
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = -2
Query: 665 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 486
L IPT+I +I I D + KPGD + A+LL L+I+ + +K YD G I
Sbjct: 145 LKIPTRIQGNSIVITRDTVVAKPGDTISEELASLLQRLDIALKEVKINIKAAYDHGIIIL 204
Query: 485 PE--ILDIK 465
+ +LD++
Sbjct: 205 RDQLVLDLE 213
>UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L10P - Ignicoccus hospitalis KIN4/I
Length = 346
Score = 41.9 bits (94), Expect = 0.014
Identities = 20/53 (37%), Positives = 27/53 (50%)
Frame = -2
Query: 665 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVY 507
L I T + GTI I D + KPGD + A+LL L I+P + +K Y
Sbjct: 151 LKIKTMVKGGTIHIAKDTVVAKPGDVISPELASLLQKLGITPMELKMKIKGAY 203
>UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L10
- Candidatus Nitrosopumilus maritimus SCM1
Length = 288
Score = 39.5 bits (88), Expect = 0.072
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = -2
Query: 659 IPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPE 480
IPTKI +GTI I D + G+ + A +L L+I P G+ + + G +A E
Sbjct: 144 IPTKIDQGTIWIAKDSTPVLKGEAINEKLAAILGKLDIKPVEAGITLFTALEDGLKYAEE 203
Query: 479 --ILDIK 465
I+D++
Sbjct: 204 EMIIDVE 210
>UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:
NEQ091 - Nanoarchaeum equitans
Length = 284
Score = 38.7 bits (86), Expect = 0.13
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = -2
Query: 671 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 540
+AL + TK++ G IEI+ D ++K G+ V A +L L I P
Sbjct: 135 RALGVKTKVTSGKIEIVEDAVVVKEGEIVSPKVANVLQTLGIKP 178
>UniRef50_Q9Y9W8 Cluster: Acidic ribosomal protein P0 homolog; n=1;
Aeropyrum pernix|Rep: Acidic ribosomal protein P0
homolog - Aeropyrum pernix
Length = 341
Score = 38.7 bits (86), Expect = 0.13
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = -2
Query: 665 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 486
L I ++ G I I + + KPGD + A LL L I P G+ VK D G +
Sbjct: 149 LRIQYQVRGGKIYIAKETVVAKPGDVISEDLAGLLMALGIRPIEKGVRVKFAIDGGVLIT 208
Query: 485 PEIL 474
++L
Sbjct: 209 EDLL 212
>UniRef50_Q9UKD2 Cluster: mRNA turnover protein 4 homolog; n=30;
Metazoa|Rep: mRNA turnover protein 4 homolog - Homo
sapiens (Human)
Length = 239
Score = 37.5 bits (83), Expect = 0.29
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = -2
Query: 665 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 486
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 485 PEILDIKPE 459
++ D PE
Sbjct: 216 QQMGDDLPE 224
>UniRef50_A7I648 Cluster: Putative uncharacterized protein; n=1;
Candidatus Methanoregula boonei 6A8|Rep: Putative
uncharacterized protein - Methanoregula boonei (strain
6A8)
Length = 647
Score = 33.5 bits (73), Expect = 4.8
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = -3
Query: 625 SSTMYTS*SPVTRLELLKPPFSTC*TSLHSHMVLLLSRYMILELFLHL-KFWTSNQKISR 449
SS ++ S +T P FS LH+H++ + ++ +++ L L+L KFW S + SR
Sbjct: 206 SSALWNSTRTITNTINEYPLFSFTWGDLHAHVISIFNQVLLIFLLLYLYKFWDSLE--SR 263
Query: 448 AKFQAGVANVAALSL 404
++ + +AALSL
Sbjct: 264 GRWL--LCGLAALSL 276
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 546,479,682
Number of Sequences: 1657284
Number of extensions: 9879162
Number of successful extensions: 23933
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 23230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23922
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51652897375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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