Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0249
(672 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic ri... 113 7e-25
BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, larg... 113 7e-25
BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, larg... 113 7e-25
BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, larg... 113 7e-25
BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, larg... 113 7e-25
BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, larg... 113 7e-25
BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, larg... 113 7e-25
BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, larg... 113 7e-25
BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, larg... 113 7e-25
BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, larg... 113 7e-25
BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, larg... 113 7e-25
BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, larg... 113 7e-25
BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, larg... 113 7e-25
AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0 va... 113 7e-25
AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0 va... 113 7e-25
AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein. 113 7e-25
AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein. 110 5e-24
BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein. 82 2e-15
BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein. 65 2e-10
BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein. 65 2e-10
AB007187-1|BAA25845.1| 93|Homo sapiens ribosomal protein P0 pr... 57 7e-08
BC006504-1|AAH06504.1| 239|Homo sapiens mRNA turnover 4 homolog... 38 0.043
BC003013-1|AAH03013.1| 239|Homo sapiens mRNA turnover 4 homolog... 38 0.043
AY303790-1|AAP68821.1| 239|Homo sapiens acidic ribosomal protei... 38 0.043
AL035413-12|CAI22233.1| 239|Homo sapiens mRNA turnover 4 homolo... 38 0.043
AK027569-1|BAB55205.1| 239|Homo sapiens protein ( Homo sapiens ... 38 0.043
AF173378-1|AAD52608.1| 239|Homo sapiens 60S acidic ribosomal pr... 38 0.043
U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoi... 31 5.0
M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein. 31 5.0
BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein. 31 5.0
AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alph... 31 5.0
AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alph... 31 5.0
AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alph... 31 5.0
>M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P0 mRNA, complete cds. ).
Length = 317
Score = 113 bits (271), Expect = 7e-25
Identities = 52/73 (71%), Positives = 65/73 (89%)
Frame = -2
Query: 671 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 492
QAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I
Sbjct: 139 QALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSI 198
Query: 491 FAPEILDIKPEDL 453
+ PE+LDI E L
Sbjct: 199 YNPEVLDITEETL 211
Score = 64.5 bits (150), Expect = 3e-10
Identities = 38/105 (36%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = -3
Query: 448 AKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDP 269
++F GV NVA++ L IGYPT+AS PHSI NG+K +L +K F+ DP
Sbjct: 213 SRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADP 272
Query: 268 SKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXETDDDMGFGLFD 137
S F E+D+DMGFGLFD
Sbjct: 273 SAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 113 bits (271), Expect = 7e-25
Identities = 52/73 (71%), Positives = 65/73 (89%)
Frame = -2
Query: 671 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 492
QAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I
Sbjct: 139 QALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSI 198
Query: 491 FAPEILDIKPEDL 453
+ PE+LDI E L
Sbjct: 199 YNPEVLDITEETL 211
Score = 64.5 bits (150), Expect = 3e-10
Identities = 38/105 (36%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = -3
Query: 448 AKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDP 269
++F GV NVA++ L IGYPT+AS PHSI NG+K +L +K F+ DP
Sbjct: 213 SRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADP 272
Query: 268 SKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXETDDDMGFGLFD 137
S F E+D+DMGFGLFD
Sbjct: 273 SAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 113 bits (271), Expect = 7e-25
Identities = 52/73 (71%), Positives = 65/73 (89%)
Frame = -2
Query: 671 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 492
QAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I
Sbjct: 139 QALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSI 198
Query: 491 FAPEILDIKPEDL 453
+ PE+LDI E L
Sbjct: 199 YNPEVLDITEETL 211
Score = 64.5 bits (150), Expect = 3e-10
Identities = 38/105 (36%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = -3
Query: 448 AKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDP 269
++F GV NVA++ L IGYPT+AS PHSI NG+K +L +K F+ DP
Sbjct: 213 SRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADP 272
Query: 268 SKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXETDDDMGFGLFD 137
S F E+D+DMGFGLFD
Sbjct: 273 SAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 113 bits (271), Expect = 7e-25
Identities = 52/73 (71%), Positives = 65/73 (89%)
Frame = -2
Query: 671 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 492
QAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I
Sbjct: 139 QALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSI 198
Query: 491 FAPEILDIKPEDL 453
+ PE+LDI E L
Sbjct: 199 YNPEVLDITEETL 211
Score = 64.5 bits (150), Expect = 3e-10
Identities = 38/105 (36%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = -3
Query: 448 AKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDP 269
++F GV NVA++ L IGYPT+AS PHSI NG+K +L +K F+ DP
Sbjct: 213 SRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADP 272
Query: 268 SKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXETDDDMGFGLFD 137
S F E+D+DMGFGLFD
Sbjct: 273 SAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 113 bits (271), Expect = 7e-25
Identities = 52/73 (71%), Positives = 65/73 (89%)
Frame = -2
Query: 671 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 492
QAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I
Sbjct: 139 QALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSI 198
Query: 491 FAPEILDIKPEDL 453
+ PE+LDI E L
Sbjct: 199 YNPEVLDITEETL 211
Score = 64.5 bits (150), Expect = 3e-10
Identities = 38/105 (36%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = -3
Query: 448 AKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDP 269
++F GV NVA++ L IGYPT+AS PHSI NG+K +L +K F+ DP
Sbjct: 213 SRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADP 272
Query: 268 SKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXETDDDMGFGLFD 137
S F E+D+DMGFGLFD
Sbjct: 273 SAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 113 bits (271), Expect = 7e-25
Identities = 52/73 (71%), Positives = 65/73 (89%)
Frame = -2
Query: 671 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 492
QAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I
Sbjct: 139 QALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSI 198
Query: 491 FAPEILDIKPEDL 453
+ PE+LDI E L
Sbjct: 199 YNPEVLDITEETL 211
Score = 64.5 bits (150), Expect = 3e-10
Identities = 38/105 (36%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = -3
Query: 448 AKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDP 269
++F GV NVA++ L IGYPT+AS PHSI NG+K +L +K F+ DP
Sbjct: 213 SRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADP 272
Query: 268 SKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXETDDDMGFGLFD 137
S F E+D+DMGFGLFD
Sbjct: 273 SAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 113 bits (271), Expect = 7e-25
Identities = 52/73 (71%), Positives = 65/73 (89%)
Frame = -2
Query: 671 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 492
QAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I
Sbjct: 139 QALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSI 198
Query: 491 FAPEILDIKPEDL 453
+ PE+LDI E L
Sbjct: 199 YNPEVLDITEETL 211
Score = 64.5 bits (150), Expect = 3e-10
Identities = 38/105 (36%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = -3
Query: 448 AKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDP 269
++F GV NVA++ L IGYPT+AS PHSI NG+K +L +K F+ DP
Sbjct: 213 SRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADP 272
Query: 268 SKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXETDDDMGFGLFD 137
S F E+D+DMGFGLFD
Sbjct: 273 SAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 113 bits (271), Expect = 7e-25
Identities = 52/73 (71%), Positives = 65/73 (89%)
Frame = -2
Query: 671 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 492
QAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I
Sbjct: 139 QALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSI 198
Query: 491 FAPEILDIKPEDL 453
+ PE+LDI E L
Sbjct: 199 YNPEVLDITEETL 211
Score = 64.5 bits (150), Expect = 3e-10
Identities = 38/105 (36%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = -3
Query: 448 AKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDP 269
++F GV NVA++ L IGYPT+AS PHSI NG+K +L +K F+ DP
Sbjct: 213 SRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADP 272
Query: 268 SKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXETDDDMGFGLFD 137
S F E+D+DMGFGLFD
Sbjct: 273 SAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 113 bits (271), Expect = 7e-25
Identities = 52/73 (71%), Positives = 65/73 (89%)
Frame = -2
Query: 671 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 492
QAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I
Sbjct: 139 QALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSI 198
Query: 491 FAPEILDIKPEDL 453
+ PE+LDI E L
Sbjct: 199 YNPEVLDITEETL 211
Score = 64.5 bits (150), Expect = 3e-10
Identities = 38/105 (36%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = -3
Query: 448 AKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDP 269
++F GV NVA++ L IGYPT+AS PHSI NG+K +L +K F+ DP
Sbjct: 213 SRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADP 272
Query: 268 SKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXETDDDMGFGLFD 137
S F E+D+DMGFGLFD
Sbjct: 273 SAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 113 bits (271), Expect = 7e-25
Identities = 52/73 (71%), Positives = 65/73 (89%)
Frame = -2
Query: 671 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 492
QAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I
Sbjct: 139 QALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSI 198
Query: 491 FAPEILDIKPEDL 453
+ PE+LDI E L
Sbjct: 199 YNPEVLDITEETL 211
Score = 62.9 bits (146), Expect = 1e-09
Identities = 37/105 (35%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = -3
Query: 448 AKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDP 269
++F GV NVA++ L IGYPT+AS PHSI NG++ +L +K F+ DP
Sbjct: 213 SRFLEGVRNVASVCLQIGYPTVASVPHSIINGYERVLALSVETDYTFPLAEKVKAFLADP 272
Query: 268 SKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXETDDDMGFGLFD 137
S F E+D+DMGFGLFD
Sbjct: 273 SAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 113 bits (271), Expect = 7e-25
Identities = 52/73 (71%), Positives = 65/73 (89%)
Frame = -2
Query: 671 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 492
QAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I
Sbjct: 139 QALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSI 198
Query: 491 FAPEILDIKPEDL 453
+ PE+LDI E L
Sbjct: 199 YNPEVLDITEETL 211
Score = 64.5 bits (150), Expect = 3e-10
Identities = 38/105 (36%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = -3
Query: 448 AKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDP 269
++F GV NVA++ L IGYPT+AS PHSI NG+K +L +K F+ DP
Sbjct: 213 SRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADP 272
Query: 268 SKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXETDDDMGFGLFD 137
S F E+D+DMGFGLFD
Sbjct: 273 SAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 113 bits (271), Expect = 7e-25
Identities = 52/73 (71%), Positives = 65/73 (89%)
Frame = -2
Query: 671 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 492
QAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I
Sbjct: 139 QALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSI 198
Query: 491 FAPEILDIKPEDL 453
+ PE+LDI E L
Sbjct: 199 YNPEVLDITEETL 211
Score = 64.5 bits (150), Expect = 3e-10
Identities = 38/105 (36%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = -3
Query: 448 AKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDP 269
++F GV NVA++ L IGYPT+AS PHSI NG+K +L +K F+ DP
Sbjct: 213 SRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADP 272
Query: 268 SKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXETDDDMGFGLFD 137
S F E+D+DMGFGLFD
Sbjct: 273 SAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 113 bits (271), Expect = 7e-25
Identities = 52/73 (71%), Positives = 65/73 (89%)
Frame = -2
Query: 671 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 492
QAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I
Sbjct: 139 QALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSI 198
Query: 491 FAPEILDIKPEDL 453
+ PE+LDI E L
Sbjct: 199 YNPEVLDITEETL 211
Score = 64.5 bits (150), Expect = 3e-10
Identities = 38/105 (36%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = -3
Query: 448 AKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDP 269
++F GV NVA++ L IGYPT+AS PHSI NG+K +L +K F+ DP
Sbjct: 213 SRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADP 272
Query: 268 SKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXETDDDMGFGLFD 137
S F E+D+DMGFGLFD
Sbjct: 273 SAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 113 bits (271), Expect = 7e-25
Identities = 52/73 (71%), Positives = 65/73 (89%)
Frame = -2
Query: 671 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 492
QAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I
Sbjct: 139 QALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSI 198
Query: 491 FAPEILDIKPEDL 453
+ PE+LDI E L
Sbjct: 199 YNPEVLDITEETL 211
Score = 64.5 bits (150), Expect = 3e-10
Identities = 38/105 (36%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = -3
Query: 448 AKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDP 269
++F GV NVA++ L IGYPT+AS PHSI NG+K +L +K F+ DP
Sbjct: 213 SRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADP 272
Query: 268 SKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXETDDDMGFGLFD 137
S F E+D+DMGFGLFD
Sbjct: 273 SAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 113 bits (271), Expect = 7e-25
Identities = 52/73 (71%), Positives = 65/73 (89%)
Frame = -2
Query: 671 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 492
QAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I
Sbjct: 139 QALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSI 198
Query: 491 FAPEILDIKPEDL 453
+ PE+LDI E L
Sbjct: 199 YNPEVLDITEETL 211
Score = 64.5 bits (150), Expect = 3e-10
Identities = 38/105 (36%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = -3
Query: 448 AKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDP 269
++F GV NVA++ L IGYPT+AS PHSI NG+K +L +K F+ DP
Sbjct: 213 SRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADP 272
Query: 268 SKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXETDDDMGFGLFD 137
S F E+D+DMGFGLFD
Sbjct: 273 SAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein.
Length = 317
Score = 113 bits (271), Expect = 7e-25
Identities = 52/73 (71%), Positives = 65/73 (89%)
Frame = -2
Query: 671 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 492
QAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I
Sbjct: 139 QALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSI 198
Query: 491 FAPEILDIKPEDL 453
+ PE+LDI E L
Sbjct: 199 YNPEVLDITEETL 211
Score = 64.5 bits (150), Expect = 3e-10
Identities = 38/105 (36%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = -3
Query: 448 AKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDP 269
++F GV NVA++ L IGYPT+AS PHSI NG+K +L +K F+ DP
Sbjct: 213 SRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADP 272
Query: 268 SKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXETDDDMGFGLFD 137
S F E+D+DMGFGLFD
Sbjct: 273 SAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein.
Length = 317
Score = 110 bits (264), Expect = 5e-24
Identities = 51/73 (69%), Positives = 64/73 (87%)
Frame = -2
Query: 671 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 492
QAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I
Sbjct: 139 QALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSI 198
Query: 491 FAPEILDIKPEDL 453
+ PE+LD E L
Sbjct: 199 YNPEVLDKTEETL 211
Score = 62.5 bits (145), Expect = 1e-09
Identities = 37/105 (35%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Frame = -3
Query: 448 AKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDP 269
++F GV NVA++ L GYPT+AS PHSI NG+K +L +K F+ DP
Sbjct: 213 SRFLEGVRNVASVCLQTGYPTVASVPHSIINGYKRVLALSVETDYTFPLAENVKAFLADP 272
Query: 268 SKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXETDDDMGFGLFD 137
S F E+D+DMGFGLFD
Sbjct: 273 SAFVAAAPVAADTTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein.
Length = 157
Score = 82.2 bits (194), Expect = 2e-15
Identities = 37/50 (74%), Positives = 45/50 (90%)
Frame = -2
Query: 602 KPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDL 453
K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L
Sbjct: 2 KTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETL 51
Score = 64.5 bits (150), Expect = 3e-10
Identities = 38/105 (36%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = -3
Query: 448 AKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDP 269
++F GV NVA++ L IGYPT+AS PHSI NG+K +L +K F+ DP
Sbjct: 53 SRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADP 112
Query: 268 SKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXETDDDMGFGLFD 137
S F E+D+DMGFGLFD
Sbjct: 113 SAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 157
>BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein.
Length = 255
Score = 64.9 bits (151), Expect = 2e-10
Identities = 41/110 (37%), Positives = 51/110 (46%), Gaps = 2/110 (1%)
Frame = -3
Query: 460 KISRAKFQA-GVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKE 284
KISR + GV NVA++ L IGYPT+AS PHSI NG+K +L +K
Sbjct: 146 KISRGTIEILGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKA 205
Query: 283 FIKDPSKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXETDDDMGFGLFD 137
F+ DPS F E+D+DMGFGLFD
Sbjct: 206 FLADPSAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 255
>BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein.
Length = 254
Score = 64.9 bits (151), Expect = 2e-10
Identities = 41/110 (37%), Positives = 51/110 (46%), Gaps = 2/110 (1%)
Frame = -3
Query: 460 KISRAKFQA-GVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKE 284
KISR + GV NVA++ L IGYPT+AS PHSI NG+K +L +K
Sbjct: 145 KISRGTIEILGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKA 204
Query: 283 FIKDPSKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXETDDDMGFGLFD 137
F+ DPS F E+D+DMGFGLFD
Sbjct: 205 FLADPSAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 254
>AB007187-1|BAA25845.1| 93|Homo sapiens ribosomal protein P0
protein.
Length = 93
Score = 56.8 bits (131), Expect = 7e-08
Identities = 27/58 (46%), Positives = 34/58 (58%)
Frame = -3
Query: 433 GVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF 260
GV NVA++ L IGYPT+AS PHSI NG+K +L +K F+ DPS F
Sbjct: 1 GVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 58
>BC006504-1|AAH06504.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 37.5 bits (83), Expect = 0.043
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = -2
Query: 665 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 486
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 485 PEILDIKPE 459
++ D PE
Sbjct: 216 QQMGDDLPE 224
>BC003013-1|AAH03013.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 37.5 bits (83), Expect = 0.043
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = -2
Query: 665 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 486
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 485 PEILDIKPE 459
++ D PE
Sbjct: 216 QQMGDDLPE 224
>AY303790-1|AAP68821.1| 239|Homo sapiens acidic ribosomal protein
PO-like protein.
Length = 239
Score = 37.5 bits (83), Expect = 0.043
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = -2
Query: 665 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 486
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 485 PEILDIKPE 459
++ D PE
Sbjct: 216 QQMGDDLPE 224
>AL035413-12|CAI22233.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 37.5 bits (83), Expect = 0.043
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = -2
Query: 665 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 486
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 485 PEILDIKPE 459
++ D PE
Sbjct: 216 QQMGDDLPE 224
>AK027569-1|BAB55205.1| 239|Homo sapiens protein ( Homo sapiens
cDNA FLJ14663 fis, clone NT2RP2002862, weakly similar to
60S ACIDIC RIBOSOMAL PROTEIN P0. ).
Length = 239
Score = 37.5 bits (83), Expect = 0.043
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = -2
Query: 665 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 486
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 485 PEILDIKPE 459
++ D PE
Sbjct: 216 QQMGDDLPE 224
>AF173378-1|AAD52608.1| 239|Homo sapiens 60S acidic ribosomal
protein PO protein.
Length = 239
Score = 37.5 bits (83), Expect = 0.043
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = -2
Query: 665 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 486
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 485 PEILDIKPE 459
++ D PE
Sbjct: 216 QQMGDDLPE 224
>U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoid
antigen 2/type XVII collagen protein.
Length = 1497
Score = 30.7 bits (66), Expect = 5.0
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 502 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 621
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein.
Length = 1532
Score = 30.7 bits (66), Expect = 5.0
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 502 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 621
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 276 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 315
>BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein.
Length = 393
Score = 30.7 bits (66), Expect = 5.0
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 502 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 621
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alpha 1
protein.
Length = 417
Score = 30.7 bits (66), Expect = 5.0
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 502 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 621
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1497
Score = 30.7 bits (66), Expect = 5.0
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 502 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 621
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1415
Score = 30.7 bits (66), Expect = 5.0
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 502 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 621
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,853,927
Number of Sequences: 237096
Number of extensions: 1530024
Number of successful extensions: 3628
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 3535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3608
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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