Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0249
(672 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair pro... 141 9e-34
BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p pro... 141 9e-34
AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p pro... 141 9e-34
AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA... 141 9e-34
AE014297-2608|AAF55620.3| 1788|Drosophila melanogaster CG31043-P... 29 5.8
>M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair
protein protein.
Length = 317
Score = 141 bits (341), Expect = 9e-34
Identities = 68/73 (93%), Positives = 71/73 (97%)
Frame = -2
Query: 671 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 492
QALSIPTKISKGTIEIINDV ILKPGDKVGASEATLLNMLNISPFSYGL+V QVYDSG+I
Sbjct: 139 QALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNISPFSYGLIVNQVYDSGSI 198
Query: 491 FAPEILDIKPEDL 453
F+PEILDIKPEDL
Sbjct: 199 FSPEILDIKPEDL 211
Score = 90.6 bits (215), Expect = 2e-18
Identities = 53/106 (50%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Frame = -3
Query: 451 RAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKD 272
RAKFQ GVAN+AA+ L++GYPTIASAPHSIANGFKNLL IKE+IKD
Sbjct: 212 RAKFQQGVANLAAVCLSVGYPTIASAPHSIANGFKNLLAIAATTEVEFKEATTIKEYIKD 271
Query: 271 PSKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXETDDDMGFGLFD 137
PSKF E DDDMGFGLFD
Sbjct: 272 PSKFAAAASASAAPAAGGATEKKEEAKKPESESEEEDDDMGFGLFD 317
>BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p
protein.
Length = 317
Score = 141 bits (341), Expect = 9e-34
Identities = 68/73 (93%), Positives = 71/73 (97%)
Frame = -2
Query: 671 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 492
QALSIPTKISKGTIEIINDV ILKPGDKVGASEATLLNMLNISPFSYGL+V QVYDSG+I
Sbjct: 139 QALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNISPFSYGLIVNQVYDSGSI 198
Query: 491 FAPEILDIKPEDL 453
F+PEILDIKPEDL
Sbjct: 199 FSPEILDIKPEDL 211
Score = 90.6 bits (215), Expect = 2e-18
Identities = 53/106 (50%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Frame = -3
Query: 451 RAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKD 272
RAKFQ GVAN+AA+ L++GYPTIASAPHSIANGFKNLL IKE+IKD
Sbjct: 212 RAKFQQGVANLAAVCLSVGYPTIASAPHSIANGFKNLLAIAATTEVEFKEATTIKEYIKD 271
Query: 271 PSKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXETDDDMGFGLFD 137
PSKF E DDDMGFGLFD
Sbjct: 272 PSKFAAAASASAAPAAGGATEKKEEAKKPESESEEEDDDMGFGLFD 317
>AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p
protein.
Length = 317
Score = 141 bits (341), Expect = 9e-34
Identities = 68/73 (93%), Positives = 71/73 (97%)
Frame = -2
Query: 671 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 492
QALSIPTKISKGTIEIINDV ILKPGDKVGASEATLLNMLNISPFSYGL+V QVYDSG+I
Sbjct: 139 QALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNISPFSYGLIVNQVYDSGSI 198
Query: 491 FAPEILDIKPEDL 453
F+PEILDIKPEDL
Sbjct: 199 FSPEILDIKPEDL 211
Score = 90.6 bits (215), Expect = 2e-18
Identities = 53/106 (50%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Frame = -3
Query: 451 RAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKD 272
RAKFQ GVAN+AA+ L++GYPTIASAPHSIANGFKNLL IKE+IKD
Sbjct: 212 RAKFQQGVANLAAVCLSVGYPTIASAPHSIANGFKNLLAIAATTEVEFKEATTIKEYIKD 271
Query: 271 PSKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXETDDDMGFGLFD 137
PSKF E DDDMGFGLFD
Sbjct: 272 PSKFAAAASASAAPAAGGATEKKEEAKKPESESEEEDDDMGFGLFD 317
>AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA
protein.
Length = 317
Score = 141 bits (341), Expect = 9e-34
Identities = 68/73 (93%), Positives = 71/73 (97%)
Frame = -2
Query: 671 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 492
QALSIPTKISKGTIEIINDV ILKPGDKVGASEATLLNMLNISPFSYGL+V QVYDSG+I
Sbjct: 139 QALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNISPFSYGLIVNQVYDSGSI 198
Query: 491 FAPEILDIKPEDL 453
F+PEILDIKPEDL
Sbjct: 199 FSPEILDIKPEDL 211
Score = 90.6 bits (215), Expect = 2e-18
Identities = 53/106 (50%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Frame = -3
Query: 451 RAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKD 272
RAKFQ GVAN+AA+ L++GYPTIASAPHSIANGFKNLL IKE+IKD
Sbjct: 212 RAKFQQGVANLAAVCLSVGYPTIASAPHSIANGFKNLLAIAATTEVEFKEATTIKEYIKD 271
Query: 271 PSKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXETDDDMGFGLFD 137
PSKF E DDDMGFGLFD
Sbjct: 272 PSKFAAAASASAAPAAGGATEKKEEAKKPESESEEEDDDMGFGLFD 317
>AE014297-2608|AAF55620.3| 1788|Drosophila melanogaster CG31043-PA,
isoform A protein.
Length = 1788
Score = 29.1 bits (62), Expect = 5.8
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +1
Query: 505 SYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSLMISIVPF 642
+Y+C T Y + M + LR + E P++ PG + TSL S F
Sbjct: 824 AYSCDTEGYYTSFHMDSGLRTLKEEEPSVMPGTPLQTSLHTSSYSF 869
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,630,951
Number of Sequences: 53049
Number of extensions: 471400
Number of successful extensions: 937
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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