Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0246
         (511 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.      24   0.91 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   1.6  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   8.4  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   8.4  

>Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.
          Length = 72

 Score = 23.8 bits (49), Expect = 0.91
 Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
 Frame = -2

Query: 303 GTIFIWIIGLWFCLNKTKYKLVCFIQR---FLGS 211
           GTI + + G+W   N+T   +  F++    F+GS
Sbjct: 25  GTIVVVVRGVWVSFNQTAQNVDTFVREQIDFVGS 58


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 159 IIFFNKFCYLL*FVIFIW 212
           ++FF  FC +L F+   W
Sbjct: 9   VLFFFSFCCILFFIYLYW 26


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +1

Query: 277 SNNPDKNGSPPYQVIFLLNPS 339
           S  P    +P YQ   LL+PS
Sbjct: 179 SATPQAGSTPTYQTQGLLSPS 199


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -3

Query: 398 WIILINILCPSISF 357
           WII + I C  I F
Sbjct: 59  WIIYVRIYCKEIRF 72


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,533
Number of Sequences: 336
Number of extensions: 2569
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12154132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)