Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0246
         (511 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060601-1|AAL28149.1|  470|Drosophila melanogaster GH01839p pro...    29   3.7  
AE013599-570|AAF59148.2|  470|Drosophila melanogaster CG14762-PA...    29   3.7  
AE014298-1830|AAN09644.1|  582|Drosophila melanogaster CG32644-P...    28   8.4  

>AY060601-1|AAL28149.1|  470|Drosophila melanogaster GH01839p
           protein.
          Length = 470

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 82  NDIKIYPTYLLKNIIQTSTQQLTNNEL 2
           NDIK+ P+ L +N+    T  L NN+L
Sbjct: 358 NDIKVLPSLLFENLNSLETLNLQNNKL 384


>AE013599-570|AAF59148.2|  470|Drosophila melanogaster CG14762-PA
           protein.
          Length = 470

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 82  NDIKIYPTYLLKNIIQTSTQQLTNNEL 2
           NDIK+ P+ L +N+    T  L NN+L
Sbjct: 358 NDIKVLPSLLFENLNSLETLNLQNNKL 384


>AE014298-1830|AAN09644.1|  582|Drosophila melanogaster CG32644-PB
           protein.
          Length = 582

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 413 PLPRPSITSKPNLIPYVDVIPRTNN 487
           P+PRPS T  P  I + D  P +++
Sbjct: 165 PIPRPSFTQNPKNIEHYDAYPSSDS 189


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,797,253
Number of Sequences: 53049
Number of extensions: 342801
Number of successful extensions: 590
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 590
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1846255872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)