Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0245
(656 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67; Eukaryo... 314 1e-84
UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107; Fungi/... 295 8e-79
UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57; Eukaryo... 250 3e-65
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr... 217 1e-55
UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4... 211 1e-53
UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative; ... 196 5e-49
UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, wh... 189 4e-47
UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|R... 183 4e-45
UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;... 169 5e-41
UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas ... 166 4e-40
UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1; Encephal... 147 2e-34
UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1; ... 121 2e-26
UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951, ... 103 4e-21
UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31; Archa... 69 3e-19
UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillard... 97 3e-19
UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1; Methan... 88 2e-16
UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8; Euryar... 59 4e-14
UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;... 74 3e-12
UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2; environm... 47 4e-11
UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella... 48 1e-08
UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12; Archa... 59 8e-08
UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole gen... 58 1e-07
UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3; Thermo... 42 6e-07
UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus... 56 7e-07
UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2; Methan... 54 4e-06
UniRef50_A0RUE8 Cluster: Ribosomal protein L18; n=1; Cenarchaeum... 36 0.012
UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2; Thermo... 37 0.49
UniRef50_Q9K4U6 Cluster: 15,16-dihydrobiliverdin:ferredoxin oxid... 35 2.0
UniRef50_O61834 Cluster: Putative uncharacterized protein; n=2; ... 33 4.6
>UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67;
Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila
melanogaster (Fruit fly)
Length = 299
Score = 314 bits (771), Expect = 1e-84
Identities = 147/206 (71%), Positives = 165/206 (80%), Gaps = 1/206 (0%)
Frame = +3
Query: 39 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 218
MGFVKVVKNKQYFKRYQVKF+RRREGKTDYYARKRL QDKNKYNTPKYRLIVRLSNKD+
Sbjct: 1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDI 60
Query: 219 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 398
T Q+AY+RIEGD +VCAAYSHELP+YG++VGLTNYAAAY TG
Sbjct: 61 TVQIAYARIEGDRVVCAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYA 120
Query: 399 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 578
E+NVEPVD+GPGAFRC+LDVGLARTTTGARVFGAMKGAVDGGLN+PHS+KRF
Sbjct: 121 GCTEVTGEEFNVEPVDDGPGAFRCFLDVGLARTTTGARVFGAMKGAVDGGLNIPHSVKRF 180
Query: 579 PGYDAESKSSMLKSQGSHLW-LHVAE 653
PGY AE+KS +H++ HVA+
Sbjct: 181 PGYSAETKSFNADVHRAHIFGQHVAD 206
>UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107;
Fungi/Metazoa group|Rep: 60S ribosomal protein L5 - Homo
sapiens (Human)
Length = 297
Score = 295 bits (723), Expect = 8e-79
Identities = 135/199 (67%), Positives = 154/199 (77%)
Frame = +3
Query: 39 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 218
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 219 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 398
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 399 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 578
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 579 PGYDAESKSSMLKSQGSHL 635
PGYD+ESK + H+
Sbjct: 181 PGYDSESKEFNAEVHRKHI 199
>UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57;
Eukaryota|Rep: 60S ribosomal protein L5 - Caenorhabditis
elegans
Length = 293
Score = 250 bits (611), Expect = 3e-65
Identities = 122/206 (59%), Positives = 144/206 (69%), Gaps = 1/206 (0%)
Frame = +3
Query: 39 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 218
MG VKV+KNK YFKRYQVK +RRREGKTDYYARKRL VQDKNKYNTPKYRLIVR++NKDV
Sbjct: 1 MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDV 60
Query: 219 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 398
Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAAAY+TG
Sbjct: 61 VAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYK 120
Query: 399 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 578
+YNVE + F+ LD+GLARTTTG+++F MKG DGG+NVPHS RF
Sbjct: 121 GHEELTGEDYNVEE-EGDRAPFKAVLDIGLARTTTGSKIFAVMKGVADGGINVPHSESRF 179
Query: 579 PGYDAESKSSMLKSQGSH-LWLHVAE 653
G+D ESK ++ L HVA+
Sbjct: 180 FGFDQESKEYNAEAHRDRILGKHVAD 205
>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
alga; n=1; Ostreococcus tauri|Rep: T08009 probable
ribosomal protein L5-green alga - Ostreococcus tauri
Length = 331
Score = 217 bits (531), Expect = 1e-55
Identities = 102/186 (54%), Positives = 124/186 (66%), Gaps = 2/186 (1%)
Frame = +3
Query: 54 VVKNKQYFKRYQVKFKRRREG--KTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQ 227
V K Y RYQVKF RRR G KTDY AR+RL+ QDKNKYN+PKYR +VR +N+DV CQ
Sbjct: 13 VAKTTAYQSRYQVKFARRRLGACKTDYQARQRLITQDKNKYNSPKYRFVVRFTNRDVVCQ 72
Query: 228 VAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXX 407
V Y+ + GD +CAAYSHELP+YG+K GLTNYAA Y+TG
Sbjct: 73 VVYATLSGDVTICAAYSHELPKYGMKAGLTNYAATYATGLLCARRLLTKYGLADAYEGKT 132
Query: 408 XXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGY 587
+Y+VE D F+C+LD GL RT+TGARVF A+KGAVDGGL++PH+ KRF GY
Sbjct: 133 EDLGEDYHVEQGDEEARPFKCFLDTGLVRTSTGARVFAALKGAVDGGLDIPHNEKRFAGY 192
Query: 588 DAESKS 605
D + KS
Sbjct: 193 DLQDKS 198
>UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4;
Leishmania|Rep: 60S ribosomal protein L5, putative -
Leishmania major strain Friedlin
Length = 328
Score = 211 bits (515), Expect = 1e-53
Identities = 106/212 (50%), Positives = 137/212 (64%), Gaps = 7/212 (3%)
Frame = +3
Query: 39 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 218
M FVKVVKNK YFKR+QVK++RRREGKTDY+AR+++V+QDK K+ +PKYRL+VR++NKD+
Sbjct: 24 MPFVKVVKNKAYFKRFQVKYRRRREGKTDYHARRQMVLQDKTKFGSPKYRLVVRITNKDI 83
Query: 219 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 398
Q+ ++I GD +V AAY+HELP +G++ GLTNYAAAY+TG
Sbjct: 84 IAQIVQAKIVGDEVVMAAYAHELPAFGIEHGLTNYAAAYATGLLLARRTLAKLGIADKFQ 143
Query: 399 XXXXXXXXEYNVEPVDNGPG------AFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVP 560
V + G F+ LDVGLARTTTGARVFG +KGAVDGG+ VP
Sbjct: 144 GAKEADGSYSAVRTKKDDEGDDEERFPFKAILDVGLARTTTGARVFGVLKGAVDGGMAVP 203
Query: 561 HSIKRFPGYDAESKSSMLKSQGSHLW-LHVAE 653
H RFPGY+ E S K ++ HVA+
Sbjct: 204 HRPNRFPGYNKEKSSLDAKVHRDRIFGKHVAD 235
>UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative;
n=4; Plasmodium (Vinckeia)|Rep: Ribosomal protein family
L5, putative - Plasmodium berghei
Length = 314
Score = 196 bits (477), Expect = 5e-49
Identities = 104/208 (50%), Positives = 125/208 (60%), Gaps = 3/208 (1%)
Frame = +3
Query: 39 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 218
M +VKVVKNK YFKRYQVK++RRREGKTDY ARK L++QDKNKYN K R IVR +N +
Sbjct: 1 MAYVKVVKNKAYFKRYQVKYRRRREGKTDYRARKALILQDKNKYNAQKLRFIVRKTNNQI 60
Query: 219 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG---XXXXXXXXXXXXXXX 389
CQ+A S IEGD I+ A S EL RYG+ VGL NYAAAY+TG
Sbjct: 61 ICQIASSHIEGDKILSEAKSKELIRYGIPVGLKNYAAAYATGLLCARRFLKSLNLDNQFI 120
Query: 390 XXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSI 569
E + + + +LDVG+ RTTTG RVF A+KGA DGGLN+PH
Sbjct: 121 GVEKVTSESVAEDGDKEEEGDRKPIKAFLDVGITRTTTGNRVFAALKGACDGGLNIPHGN 180
Query: 570 KRFPGYDAESKSSMLKSQGSHLWLHVAE 653
RFPG E L+ + L +HVAE
Sbjct: 181 NRFPGSKNEFNPEQLRK--NILGIHVAE 206
>UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 338
Score = 189 bits (461), Expect = 4e-47
Identities = 92/187 (49%), Positives = 122/187 (65%)
Frame = +3
Query: 39 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 218
M FVK+VK YFKR+Q KF+RRREGKTDYYAR RL+VQDK+KYN+PKYR +VR +N +
Sbjct: 1 MAFVKLVKGTPYFKRFQTKFRRRREGKTDYYARSRLIVQDKDKYNSPKYRFVVRHTNTKI 60
Query: 219 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 398
CQV Y+ ++GD +V AA S EL R+G+ GLTNYAAAY+TG
Sbjct: 61 ICQVIYATLKGDKVVAAAESTELKRFGLTSGLTNYAAAYATG---LLLARRTLKTLKMDK 117
Query: 399 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 578
+ N++ P F LD+GL R+T G RVF A+KGA DGG+++PH+ +RF
Sbjct: 118 FYEGNKTIDGNLKTQRERP--FFAVLDIGLVRSTLGNRVFAALKGAADGGIHIPHNNRRF 175
Query: 579 PGYDAES 599
PG+ ++
Sbjct: 176 PGFSVDN 182
>UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|Rep:
Ribosomal protein L5e - Hister sp. APV-2005
Length = 268
Score = 183 bits (445), Expect = 4e-45
Identities = 81/89 (91%), Positives = 87/89 (97%)
Frame = +3
Query: 39 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 218
MGFVKVVKNKQYFKR+QVKFKRRREGKTDYYARKRL+VQDKNKYNTPKYRLIVR SN+D+
Sbjct: 1 MGFVKVVKNKQYFKRFQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNRDI 60
Query: 219 TCQVAYSRIEGDHIVCAAYSHELPRYGVK 305
TCQ+AYSRIEGD I+CAAYSHELPRYGVK
Sbjct: 61 TCQIAYSRIEGDKILCAAYSHELPRYGVK 89
>UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L18p/L5e
family protein - Tetrahymena thermophila SB210
Length = 590
Score = 169 bits (411), Expect = 5e-41
Identities = 81/181 (44%), Positives = 109/181 (60%), Gaps = 3/181 (1%)
Frame = +3
Query: 90 VKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCA 269
++ K+ +G TDYYARKRL++QDK+KYNTPKYRL+ R +N + Q+ Y+ ++ D ++CA
Sbjct: 307 IQIKQNYQGLTDYYARKRLIIQDKDKYNTPKYRLVARATNTRIIAQIVYATLKCDRVLCA 366
Query: 270 AYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDN 449
A S+EL R+GV GL +YAAAY+TG +NV+
Sbjct: 367 ADSYELKRFGVSTGLASYAAAYATGLLLARRLLKQIGLDTVYAGQTKVDGAYFNVDEDQK 426
Query: 450 GPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGY---DAESKSSMLKS 620
F+ LD GL RTTTG RVFG +KGA DGG+N+PHS RFPGY E +SS K
Sbjct: 427 EKKPFKAILDAGLVRTTTGNRVFGVLKGACDGGINIPHSESRFPGYVRASDEGESSKYKP 486
Query: 621 Q 623
+
Sbjct: 487 E 487
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +3
Query: 39 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYY 131
+GFVKV+K K YFKR+Q K++RRR GK YY
Sbjct: 13 LGFVKVLKTKAYFKRFQTKYRRRR-GKQLYY 42
>UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L5 - Trichomonas
vaginalis
Length = 308
Score = 166 bits (404), Expect = 4e-40
Identities = 86/187 (45%), Positives = 112/187 (59%), Gaps = 1/187 (0%)
Frame = +3
Query: 51 KVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQV 230
K+VKN YF R+Q KF+RRRE KTDY R +L+ QDK KY KYRL+ R++N V Q+
Sbjct: 4 KLVKNAGYFSRFQTKFRRRREAKTDYVQRTQLIQQDKTKYGAAKYRLVARITNTKVIAQI 63
Query: 231 AYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXX 410
+ + GD VC A S ELP+YG+K+GL+NY AAY+TG
Sbjct: 64 VVAELTGDKTVCQALSTELPKYGIKLGLSNYPAAYATG---LLVARRFLTQMKLADVFKT 120
Query: 411 XXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP-GY 587
EY + + P F+ LDVGLARTTTGA+VF MKGAVDGGL +PH++ R +
Sbjct: 121 EITEEYLNDEENRRP--FKVILDVGLARTTTGAKVFAVMKGAVDGGLFIPHNVCRLACKF 178
Query: 588 DAESKSS 608
D + K +
Sbjct: 179 DKKDKDA 185
>UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L5 -
Encephalitozoon cuniculi
Length = 283
Score = 147 bits (357), Expect = 2e-34
Identities = 76/175 (43%), Positives = 104/175 (59%), Gaps = 1/175 (0%)
Frame = +3
Query: 66 KQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRI 245
+ Y K +QVK +RRREGKTDY R ++ QD N + K+RL+VR++ V CQ+ + +
Sbjct: 4 RNYHKNFQVKRRRRREGKTDYKHRTNMIRQDSNSCGSVKHRLVVRITGSRVICQIVAAYM 63
Query: 246 EGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXE 425
+GD ++ A S EL RYG+ G TNY+AAY+TG
Sbjct: 64 DGDRVMVYADSRELERYGINFGATNYSAAYATG--FLIGRRALTAMSLDEVYRPKEIDGT 121
Query: 426 YNV-EPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGY 587
Y+V + +D A R +LD+GLAR+T GARVFGA+KGA D GLNVPHS +F G+
Sbjct: 122 YSVTKDIDGEKKAPRVFLDIGLARSTRGARVFGALKGASDAGLNVPHSAAKFYGH 176
>UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1;
Theileria sp. CAAS-2005|Rep: Putative uncharacterized
protein - Theileria sp. CAAS-2005
Length = 255
Score = 121 bits (291), Expect = 2e-26
Identities = 63/136 (46%), Positives = 78/136 (57%)
Frame = +3
Query: 201 LSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXX 380
++NK V CQV S + GD + +A S EL YGVKVGLTNYAAAY TG
Sbjct: 4 VTNKRVICQVVSSTLVGDKVHASADSAELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLK 63
Query: 381 XXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVP 560
Y+VE +N F+ LDVG+ TTG RVFGA+KGA DGGL+VP
Sbjct: 64 LDSQFVGKLEVDGEVYHVEEEENERRPFKALLDVGVKNVTTGNRVFGALKGACDGGLHVP 123
Query: 561 HSIKRFPGYDAESKSS 608
HS KRFPGY + +++
Sbjct: 124 HSEKRFPGYSVDEENN 139
>UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_2951, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 117
Score = 103 bits (247), Expect = 4e-21
Identities = 46/72 (63%), Positives = 55/72 (76%)
Frame = +3
Query: 39 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 218
+ FVK K + Y KR+QVKFKRRR GKTDY AR RL+ QDKNKYNTPKYR +VR +NKD+
Sbjct: 12 LAFVKAQKTRAYSKRFQVKFKRRRAGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 71
Query: 219 TCQVAYSRIEGD 254
T Q+ + I GD
Sbjct: 72 TAQIISASIAGD 83
>UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31;
Archaea|Rep: 50S ribosomal protein L18P - Aeropyrum
pernix
Length = 214
Score = 69.3 bits (162), Expect(2) = 3e-19
Identities = 41/89 (46%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Frame = +3
Query: 81 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 260
RY+V +RRREGKT+YY R RLV + K R+ VR+SN+ + Q +RIEGD +
Sbjct: 6 RYRVPLRRRREGKTNYYRRFRLV-------KSGKPRMAVRISNEYLWVQFLEARIEGDRV 58
Query: 261 VCAAYSHEL-PRYGVKVGLTNYAAAYSTG 344
+ AA+S EL ++G K N AAY TG
Sbjct: 59 IAAAHSRELIKKFGWKGDGNNTCAAYLTG 87
Score = 48.8 bits (111), Expect(2) = 3e-19
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +3
Query: 456 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPG 584
G LDVGL + G+RVF A+KGA+D G+ +PHS + PG
Sbjct: 98 GVREAVLDVGLHKPVKGSRVFAALKGALDAGVEIPHSEEILPG 140
>UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillardia
theta|Rep: 60S ribosomal protein L5 - Guillardia theta
(Cryptomonas phi)
Length = 232
Score = 97.1 bits (231), Expect = 3e-19
Identities = 62/195 (31%), Positives = 96/195 (49%), Gaps = 4/195 (2%)
Frame = +3
Query: 63 NKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSR 242
N Y R+++K +RRR GKTDY R +L+ QDK K+ K R+I+R S ++++ Q+ S
Sbjct: 9 NASYHSRFKLKKRRRRIGKTDYKKRMKLIRQDKKKFENKKKRIIIRFSKRNLSLQMVNSN 68
Query: 243 IEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXX 422
++GD I+ ++Y L + K NY +Y G
Sbjct: 69 VDGDFILLSSYLKNLSKLEYKNLTNNYPFSYLLG-----------YYFGKDLIEKVKQSE 117
Query: 423 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSI-KRFPGYDAES 599
YN + N +D+GL R T G + F +MKG+VD G+N+PH+ K F + E
Sbjct: 118 TYNKK---NYSSKITAIIDIGLKRATIGNKSFASMKGSVDSGINIPHNYNKIFKVKNNEI 174
Query: 600 KSSML---KSQGSHL 635
S L +S+G H+
Sbjct: 175 DSKELFNERSKGIHI 189
>UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1;
Methanoculleus marisnigri JR1|Rep: Ribosomal protein
L18P/L5E - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 175
Score = 88.2 bits (209), Expect = 2e-16
Identities = 63/167 (37%), Positives = 83/167 (49%)
Frame = +3
Query: 81 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 260
RY V F+RR EGKTDYY R L+ TP R++VR +N+ + Q+ +EGD
Sbjct: 6 RYFVPFRRRHEGKTDYYKRMSLLSS-----GTP--RMVVRKTNRQIIVQLVVPEVEGDST 58
Query: 261 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 440
+ AAYS EL YG + + AAY TG + V+
Sbjct: 59 LVAAYSAELAGYGYEGSTASTPAAYLTGML-------------------------FAVKA 93
Query: 441 VDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 581
++ G G LD+GLAR GARVF A+KGAVD GL+VP+ P
Sbjct: 94 LNAGYG--EAILDIGLARAKPGARVFAALKGAVDAGLDVPYGESILP 138
>UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L18P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 187
Score = 58.8 bits (136), Expect(2) = 4e-14
Identities = 34/88 (38%), Positives = 48/88 (54%)
Frame = +3
Query: 81 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 260
RY+V +RRRE +TDY+ R RL+ + K RL+ R SNK V Q+ GD
Sbjct: 6 RYKVPMRRRREARTDYHQRLRLL-------KSGKPRLVARKSNKHVRAQLVTLGPNGDDT 58
Query: 261 VCAAYSHELPRYGVKVGLTNYAAAYSTG 344
+ +A+S +L YG + N +AY TG
Sbjct: 59 LASAHSSDLAEYGWEAPTGNMPSAYLTG 86
Score = 41.5 bits (93), Expect(2) = 4e-14
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +3
Query: 456 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 566
G LD+GL T G++VF +GA+D GL++PH+
Sbjct: 97 GVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPHN 133
>UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 74.1 bits (174), Expect = 3e-12
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = +3
Query: 189 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 344
+IV +N+ + CQ+AY+ E D IVCAAY+HELP+ GVKVGLTNYAAAY G
Sbjct: 1 MIVLATNRGIICQIAYAGNECDMIVCAAYAHELPKSGVKVGLTNYAAAYCIG 52
Score = 62.5 bits (145), Expect = 9e-09
Identities = 28/40 (70%), Positives = 33/40 (82%)
Frame = +3
Query: 483 GLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESK 602
GLARTTTG +VFGA+K VD GL++PHS K FPGYD+ SK
Sbjct: 71 GLARTTTGNKVFGALKEPVDCGLSIPHSTKCFPGYDSVSK 110
>UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2;
environmental samples|Rep: Ribosomal protein L18/L5 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 171
Score = 47.2 bits (107), Expect(2) = 4e-11
Identities = 21/42 (50%), Positives = 26/42 (61%)
Frame = +3
Query: 456 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 581
G LDVGLA T+G RVF A++G VD GL++PH P
Sbjct: 100 GHSEAVLDVGLAAATSGNRVFAALRGMVDAGLDIPHGADVLP 141
Score = 43.2 bits (97), Expect(2) = 4e-11
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Frame = +3
Query: 78 KRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDH 257
K +++FKRRR G+TDY R R++ R +VR+SN TCQ+ GD
Sbjct: 5 KNQRLRFKRRRTGETDYRRRMRML-------RGGATRAVVRVSNTQTTCQLINYDSTGDE 57
Query: 258 IVCAAYSHEL-PRYG--VKVGLTNYAAAYSTG 344
++ + L R+G + + A+Y TG
Sbjct: 58 VIISVTGKTLVDRFGWPLDASRKSVPASYLTG 89
>UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella
natans|Rep: Ribosomal protein L5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 252
Score = 47.6 bits (108), Expect(2) = 1e-08
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
Frame = +3
Query: 39 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYAR--KRLVVQDKNKYNTPKYRLIVRLSNK 212
M + K++KN YF ++ VK +R R+ T Y R + NK + K+R +N
Sbjct: 1 MIYQKIIKNASYFSKFVVKHRRNRKFLTKYGKSYDSRFLKSYTNK--SKKFRSYFTTTNT 58
Query: 213 DVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 344
+++ + +S + GD IV A S +L ++G+ N +Y G
Sbjct: 59 NLSGVITFSSLSGDTIVAKASSMDLIKFGLIHSKKNLINSYFIG 102
Score = 34.3 bits (75), Expect(2) = 1e-08
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +3
Query: 462 FRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS--IKRFPGYDAESKSSMLKSQGSHL 635
F +D+G R R+ +KG +DGG+ +P S K D S+ S+ KS S L
Sbjct: 121 FLLTIDIGFKRLNEKGRINAFIKGLIDGGIQIPVSQIAKNKTSNDERSQKSLNKSYFSAL 180
>UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12;
Archaea|Rep: 50S ribosomal protein L18P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 174
Score = 59.3 bits (137), Expect = 8e-08
Identities = 34/88 (38%), Positives = 51/88 (57%)
Frame = +3
Query: 81 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 260
RY+V F+RRREG+T+Y+ R +L++ ++ R++VR S ++V Q+ EGD
Sbjct: 6 RYKVPFRRRREGRTNYHLRLKLLLSGQD-------RVVVRKSARNVQIQLLAPTPEGDIT 58
Query: 261 VCAAYSHELPRYGVKVGLTNYAAAYSTG 344
+A S EL +YG N AAY TG
Sbjct: 59 YSSAVSSELAKYGYTGATGNTTAAYLTG 86
Score = 41.1 bits (92), Expect = 0.023
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +3
Query: 474 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 581
LD+GL ++ G+RV+ A+KG VD G +P S FP
Sbjct: 103 LDIGLQASSAGSRVYAALKGIVDSGFEIPCSSDVFP 138
>UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 58.4 bits (135), Expect = 1e-07
Identities = 27/60 (45%), Positives = 40/60 (66%)
Frame = +3
Query: 423 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESK 602
+Y+VE NG F +L+VGL +T+ G VFG +K A+DG LN+PH+ +RF G ++K
Sbjct: 43 DYSVEST-NGKRPFYAFLNVGLVKTSIGNCVFGVLKEALDGSLNIPHNDRRFVGSSKDNK 101
>UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3;
Thermoplasma|Rep: 50S ribosomal protein L18P -
Thermoplasma acidophilum
Length = 163
Score = 42.3 bits (95), Expect(2) = 6e-07
Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +3
Query: 96 FKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVA-YSRIEGDHIVCAA 272
FKR+ G TDY R +L+ + + K R IVR++ K V QVA YS I GD I+
Sbjct: 6 FKRKEAGITDYSKRLKLL-KSREK------RFIVRITGKGVIAQVAEYSDI-GDRILFTV 57
Query: 273 YSHELPRYGVKVGLTNYAAAYSTG 344
L +YGV + N Y G
Sbjct: 58 TDKTLAKYGVDLRGNNIQVCYLVG 81
Score = 33.9 bits (74), Expect(2) = 6e-07
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +3
Query: 456 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 581
G LD G + G R+ +KG D G+ VPH FP
Sbjct: 92 GVESAVLDTGRRKFRKGGRIAACLKGFTDAGIEVPHGEDVFP 133
>UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus
musculus|Rep: PREDICTED: cadherin 18 - Mus musculus
Length = 339
Score = 56.0 bits (129), Expect = 7e-07
Identities = 22/32 (68%), Positives = 30/32 (93%)
Frame = +3
Query: 87 QVKFKRRREGKTDYYARKRLVVQDKNKYNTPK 182
+++F+R +EGKTDYYARKRL +QDKN+YNTP+
Sbjct: 36 KLRFRRWQEGKTDYYARKRLEIQDKNEYNTPE 67
>UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L18P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 193
Score = 53.6 bits (123), Expect = 4e-06
Identities = 33/87 (37%), Positives = 47/87 (54%)
Frame = +3
Query: 84 YQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIV 263
Y+V+FKRRREGKT+Y R +LV DK R++VR+++ Q+ GD +
Sbjct: 7 YKVQFKRRREGKTNYNKRYKLVDLDKT-------RMVVRITSNHTITQLVKIGENGDETL 59
Query: 264 CAAYSHELPRYGVKVGLTNYAAAYSTG 344
+A S L +G N +AAY TG
Sbjct: 60 VSATSKNLKEFGWLGNGKNTSAAYLTG 86
Score = 37.1 bits (82), Expect = 0.37
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +3
Query: 474 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 581
LD+G+ + G +++ +KGA+D GL +PH+ P
Sbjct: 103 LDIGVQPSIKGTKIYAVLKGALDAGLYIPHNDSILP 138
>UniRef50_A0RUE8 Cluster: Ribosomal protein L18; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L18 - Cenarchaeum
symbiosum
Length = 159
Score = 35.5 bits (78), Expect(2) = 0.012
Identities = 22/82 (26%), Positives = 43/82 (52%)
Frame = +3
Query: 99 KRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYS 278
+R RE KT+Y ++R ++ + + T V +SN++ Q+ +++GD ++ + +S
Sbjct: 8 RRLREEKTNY-KKRRSMLMGRRDFVT------VHISNENAQVQIHAPKMDGDVVIASGHS 60
Query: 279 HELPRYGVKVGLTNYAAAYSTG 344
L G K + A+Y TG
Sbjct: 61 RYLASKGWKGSRKSIPASYLTG 82
Score = 25.8 bits (54), Expect(2) = 0.012
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 456 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 581
GA + G R T R+ A+KG D G++VP FP
Sbjct: 93 GAKSAIMYTGTRRYTD--RISAALKGVSDAGVDVPIDPSTFP 132
>UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2;
Thermoplasmatales|Rep: 50S ribosomal protein L18P -
Picrophilus torridus
Length = 158
Score = 36.7 bits (81), Expect = 0.49
Identities = 22/65 (33%), Positives = 33/65 (50%)
Frame = +3
Query: 99 KRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYS 278
KRRREG TDY R RLV+ + R ++R + K + Q+ EGDH++ +
Sbjct: 8 KRRREGVTDYRKRYRLVISRET-------RAVIRQTRKGLIIQLVDYVPEGDHVLVTVTN 60
Query: 279 HELPR 293
L +
Sbjct: 61 KTLKK 65
>UniRef50_Q9K4U6 Cluster: 15,16-dihydrobiliverdin:ferredoxin
oxidoreductase; n=1; Prochlorococcus marinus|Rep:
15,16-dihydrobiliverdin:ferredoxin oxidoreductase -
Prochlorococcus marinus
Length = 241
Score = 34.7 bits (76), Expect = 2.0
Identities = 18/65 (27%), Positives = 35/65 (53%)
Frame = +3
Query: 39 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 218
+ F +V+ ++YF RY + + D+ ++K + + D NKY +P + L+ S D+
Sbjct: 102 LDFQPLVQEERYFCRYYKDLQILKNRFVDFNSQKTMKIYDSNKYFSP-WVLLYNGSFDDL 160
Query: 219 TCQVA 233
C +A
Sbjct: 161 QCSLA 165
>UniRef50_O61834 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 696
Score = 33.5 bits (73), Expect = 4.6
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +3
Query: 429 NVEPVDNGPGAFRCYL-DVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKS 605
N EP++ G F C+L TT+G+R G + L + ++FPG + S
Sbjct: 68 NAEPIEKKNGGFNCHLHSKSPVLTTSGSRTVGTKTCLENKCLKRSFAFEKFPGRSLVNSS 127
Query: 606 SMLKS 620
++K+
Sbjct: 128 FIIKT 132
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 653,380,766
Number of Sequences: 1657284
Number of extensions: 12858316
Number of successful extensions: 33871
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 32546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33834
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49586781480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -