Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0244
(686 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X64044-1|CAA45409.1| 475|Homo sapiens splicing factor U2AF prot... 205 1e-52
BC030574-1|AAH30574.1| 471|Homo sapiens U2 small nuclear RNA au... 205 1e-52
BC008740-1|AAH08740.1| 471|Homo sapiens U2 small nuclear RNA au... 205 1e-52
BC010939-1|AAH10939.1| 306|Homo sapiens poly(A) binding protein... 40 0.006
AF026029-1|AAC39596.1| 306|Homo sapiens poly(A) binding protein... 40 0.006
BC112343-1|AAI12344.1| 508|Homo sapiens SFRS12 protein protein. 36 0.18
BC067770-1|AAH67770.1| 508|Homo sapiens splicing factor, argini... 36 0.18
BC047322-1|AAH47322.1| 386|Homo sapiens Similar to expressed se... 36 0.18
AF459094-1|AAL67778.1| 508|Homo sapiens splicing factor, argini... 36 0.18
Z95327-3|CAI42680.1| 577|Homo sapiens cleavage stimulation fact... 34 0.41
Z83819-6|CAB06072.2| 577|Homo sapiens cleavage stimulation fact... 34 0.41
M85085-1|AAA35724.1| 577|Homo sapiens cleavage stimulation fact... 34 0.41
BT009778-1|AAP88780.1| 577|Homo sapiens cleavage stimulation fa... 34 0.41
BC033135-1|AAH33135.1| 559|Homo sapiens Similar to cleavage sti... 34 0.41
BC017712-1|AAH17712.1| 577|Homo sapiens cleavage stimulation fa... 34 0.41
X55733-1|CAA39265.1| 611|Homo sapiens initation factor 4B protein. 33 0.72
CR456958-1|CAG33239.1| 611|Homo sapiens EIF4B protein. 33 0.72
BC098437-1|AAH98437.1| 611|Homo sapiens eukaryotic translation ... 33 0.72
BC073154-1|AAH73154.1| 611|Homo sapiens eukaryotic translation ... 33 0.72
BC073139-1|AAH73139.1| 611|Homo sapiens eukaryotic translation ... 33 0.72
BC029451-1|AAH29451.1| 425|Homo sapiens RNA binding motif prote... 33 0.72
AL732292-3|CAM28277.1| 408|Homo sapiens novel protein protein. 33 0.72
AL732292-2|CAI21936.1| 430|Homo sapiens RNA binding motif prote... 33 0.72
AL133418-4|CAM28326.1| 408|Homo sapiens novel protein protein. 33 0.72
AL133418-3|CAI22960.1| 430|Homo sapiens RNA binding motif prote... 33 0.72
AK222528-1|BAD96248.1| 611|Homo sapiens eukaryotic translation ... 33 0.72
AB076839-1|BAB82380.1| 611|Homo sapiens eukaryotic initiation f... 33 0.72
BC028239-1|AAH28239.1| 616|Homo sapiens cleavage stimulation fa... 33 0.95
AY130299-1|AAN05429.1| 616|Homo sapiens tCstF-64 protein. 33 0.95
Y11289-1|CAA72157.1| 471|Homo sapiens p54nrb protein. 33 1.3
U89867-1|AAC51852.1| 471|Homo sapiens nuclear matrix protein 55... 33 1.3
U02493-1|AAA03427.1| 471|Homo sapiens 54 kDa protein protein. 33 1.3
L14599-1|AAC37578.1| 471|Homo sapiens protein ( Human mRNA, com... 33 1.3
CR456761-1|CAG33042.1| 471|Homo sapiens NONO protein. 33 1.3
BC069639-1|AAH69639.1| 471|Homo sapiens non-POU domain containi... 33 1.3
BC069616-1|AAH69616.1| 471|Homo sapiens non-POU domain containi... 33 1.3
BC028299-1|AAH28299.1| 471|Homo sapiens non-POU domain containi... 33 1.3
BC012141-1|AAH12141.1| 471|Homo sapiens NONO protein protein. 33 1.3
BC003129-1|AAH03129.1| 471|Homo sapiens NONO protein protein. 33 1.3
BC002364-1|AAH02364.1| 471|Homo sapiens non-POU domain containi... 33 1.3
BC070262-1|AAH70262.1| 266|Homo sapiens RNA binding motif prote... 32 1.7
BC034381-1|AAH34381.1| 266|Homo sapiens RNA binding motif prote... 32 1.7
AK002015-1|BAA92036.1| 267|Homo sapiens protein ( Homo sapiens ... 32 1.7
AF156098-1|AAD39257.1| 266|Homo sapiens RNA binding motif prote... 32 1.7
AB209753-1|BAD92990.1| 155|Homo sapiens Hypothetical protein FL... 32 1.7
CR457272-1|CAG33553.1| 357|Homo sapiens PSPC1 protein. 32 2.2
BC014184-1|AAH14184.2| 393|Homo sapiens PSPC1 protein protein. 32 2.2
BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein. 32 2.2
BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein. 32 2.2
AL354808-5|CAI41005.1| 248|Homo sapiens paraspeckle component 1... 32 2.2
AL354808-4|CAI41004.1| 523|Homo sapiens paraspeckle component 1... 32 2.2
AK001817-1|BAA91924.1| 357|Homo sapiens protein ( Homo sapiens ... 32 2.2
AF449627-1|AAL59602.1| 393|Homo sapiens paraspeckle protein 1 b... 32 2.2
AF448795-1|AAL59601.1| 523|Homo sapiens paraspeckle protein 1 a... 32 2.2
AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein. 32 2.2
BX640912-1|CAE45953.1| 613|Homo sapiens hypothetical protein pr... 31 2.9
BC001449-1|AAH01449.1| 636|Homo sapiens HNRPR protein protein. 31 2.9
AL109936-4|CAI19027.1| 636|Homo sapiens heterogeneous nuclear r... 31 2.9
AK222574-1|BAD96294.1| 616|Homo sapiens cleavage stimulation fa... 31 3.8
AM295005-1|CAL25726.1| 289|Homo sapiens boll protein protein. 31 5.1
AL450998-10|CAH70858.1| 3664|Homo sapiens SMART/HDAC1 associated... 31 5.1
AL034555-4|CAI19526.1| 3664|Homo sapiens SMART/HDAC1 associated ... 31 5.1
AK093453-1|BAC04171.1| 339|Homo sapiens protein ( Homo sapiens ... 31 5.1
AF356524-1|AAK52750.1| 3664|Homo sapiens nuclear receptor transc... 31 5.1
X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage f... 30 8.9
X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein. 30 8.9
D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein. 30 8.9
BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA bind... 30 8.9
BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein. 30 8.9
BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA bind... 30 8.9
BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein. 30 8.9
BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA bind... 30 8.9
AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenyl... 30 8.9
AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RN... 30 8.9
AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein. 30 8.9
>X64044-1|CAA45409.1| 475|Homo sapiens splicing factor U2AF
protein.
Length = 475
Score = 205 bits (500), Expect = 1e-52
Identities = 100/135 (74%), Positives = 107/135 (79%), Gaps = 8/135 (5%)
Frame = +2
Query: 254 YWDVPPPGFEHITPLQYKAMQAAGQIPANIVADT--------PQAAVPVVGSTITRQARR 409
YWDVPPPGFEHITP+QYKAMQAAGQIPA + T VPVVGS +TRQARR
Sbjct: 91 YWDVPPPGFEHITPMQYKAMQAAGQIPATALLPTMTPDGLAVTPTPVPVVGSQMTRQARR 150
Query: 410 LYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETTQ 589
LYVGNIPFG+TEE M+FFN QM L GL QA GNPVLA QIN DKNFAFLEFRS+DETTQ
Sbjct: 151 LYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQ 210
Query: 590 AMAFDGINFKGQKLK 634
AMAFDGI F+GQ LK
Sbjct: 211 AMAFDGIIFQGQSLK 225
Score = 46.4 bits (105), Expect = 1e-04
Identities = 19/27 (70%), Positives = 25/27 (92%), Gaps = 1/27 (3%)
Frame = +3
Query: 609 LILKGKSLKIRRPHDYQPMPG-TENPA 686
+I +G+SLKIRRPHDYQP+PG +ENP+
Sbjct: 217 IIFQGQSLKIRRPHDYQPLPGMSENPS 243
>BC030574-1|AAH30574.1| 471|Homo sapiens U2 small nuclear RNA
auxiliary factor 2 protein.
Length = 471
Score = 205 bits (500), Expect = 1e-52
Identities = 100/135 (74%), Positives = 107/135 (79%), Gaps = 8/135 (5%)
Frame = +2
Query: 254 YWDVPPPGFEHITPLQYKAMQAAGQIPANIVADT--------PQAAVPVVGSTITRQARR 409
YWDVPPPGFEHITP+QYKAMQAAGQIPA + T VPVVGS +TRQARR
Sbjct: 91 YWDVPPPGFEHITPMQYKAMQAAGQIPATALLPTMTPDGLAVTPTPVPVVGSQMTRQARR 150
Query: 410 LYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETTQ 589
LYVGNIPFG+TEE M+FFN QM L GL QA GNPVLA QIN DKNFAFLEFRS+DETTQ
Sbjct: 151 LYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQ 210
Query: 590 AMAFDGINFKGQKLK 634
AMAFDGI F+GQ LK
Sbjct: 211 AMAFDGIIFQGQSLK 225
Score = 46.4 bits (105), Expect = 1e-04
Identities = 19/27 (70%), Positives = 25/27 (92%), Gaps = 1/27 (3%)
Frame = +3
Query: 609 LILKGKSLKIRRPHDYQPMPG-TENPA 686
+I +G+SLKIRRPHDYQP+PG +ENP+
Sbjct: 217 IIFQGQSLKIRRPHDYQPLPGMSENPS 243
>BC008740-1|AAH08740.1| 471|Homo sapiens U2 small nuclear RNA
auxiliary factor 2 protein.
Length = 471
Score = 205 bits (500), Expect = 1e-52
Identities = 100/135 (74%), Positives = 107/135 (79%), Gaps = 8/135 (5%)
Frame = +2
Query: 254 YWDVPPPGFEHITPLQYKAMQAAGQIPANIVADT--------PQAAVPVVGSTITRQARR 409
YWDVPPPGFEHITP+QYKAMQAAGQIPA + T VPVVGS +TRQARR
Sbjct: 91 YWDVPPPGFEHITPMQYKAMQAAGQIPATALLPTMTPDGLAVTPTPVPVVGSQMTRQARR 150
Query: 410 LYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETTQ 589
LYVGNIPFG+TEE M+FFN QM L GL QA GNPVLA QIN DKNFAFLEFRS+DETTQ
Sbjct: 151 LYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQ 210
Query: 590 AMAFDGINFKGQKLK 634
AMAFDGI F+GQ LK
Sbjct: 211 AMAFDGIIFQGQSLK 225
Score = 46.4 bits (105), Expect = 1e-04
Identities = 19/27 (70%), Positives = 25/27 (92%), Gaps = 1/27 (3%)
Frame = +3
Query: 609 LILKGKSLKIRRPHDYQPMPG-TENPA 686
+I +G+SLKIRRPHDYQP+PG +ENP+
Sbjct: 217 IIFQGQSLKIRRPHDYQPLPGMSENPS 243
>BC010939-1|AAH10939.1| 306|Homo sapiens poly(A) binding protein,
nuclear 1 protein.
Length = 306
Score = 40.3 bits (90), Expect = 0.006
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Frame = +2
Query: 356 PQAAVPVVGST---ITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLAC 526
P A PV+ S + AR +YVGN+ +G T EE + H G +L
Sbjct: 153 PGNAGPVIMSIEEKMEADARSIYVGNVDYGATAEEL------EAHFHGCGSVNRVTILCD 206
Query: 527 QIN-LDKNFAFLEFRSIDETTQAMAFDGINFKGQKLK 634
+ + K FA++EF + ++A D F+G+++K
Sbjct: 207 KFSGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIK 243
>AF026029-1|AAC39596.1| 306|Homo sapiens poly(A) binding protein II
protein.
Length = 306
Score = 40.3 bits (90), Expect = 0.006
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Frame = +2
Query: 356 PQAAVPVVGST---ITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLAC 526
P A PV+ S + AR +YVGN+ +G T EE + H G +L
Sbjct: 153 PGNAGPVIMSIEEKMEADARSIYVGNVDYGATAEEL------EAHFHGCGSVNRVTILCD 206
Query: 527 QIN-LDKNFAFLEFRSIDETTQAMAFDGINFKGQKLK 634
+ + K FA++EF + ++A D F+G+++K
Sbjct: 207 KFSGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIK 243
>BC112343-1|AAI12344.1| 508|Homo sapiens SFRS12 protein protein.
Length = 508
Score = 35.5 bits (78), Expect = 0.18
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +2
Query: 383 STITRQARRLYVGNIPFGVTE-EETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFL 559
S I R +YVGN+ T ++ +EFF Q + + AG+ + FAF+
Sbjct: 59 SKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVK-FVRMAGDETQPTR------FAFV 111
Query: 560 EFRSIDETTQAMAFDGINFKGQKLK 634
EF + +A+AF+G+ F + LK
Sbjct: 112 EFADQNSVPRALAFNGVMFGDRPLK 136
>BC067770-1|AAH67770.1| 508|Homo sapiens splicing factor,
arginine/serine-rich 12 protein.
Length = 508
Score = 35.5 bits (78), Expect = 0.18
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +2
Query: 383 STITRQARRLYVGNIPFGVTE-EETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFL 559
S I R +YVGN+ T ++ +EFF Q + + AG+ + FAF+
Sbjct: 59 SKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVK-FVRMAGDETQPTR------FAFV 111
Query: 560 EFRSIDETTQAMAFDGINFKGQKLK 634
EF + +A+AF+G+ F + LK
Sbjct: 112 EFADQNSVPRALAFNGVMFGDRPLK 136
>BC047322-1|AAH47322.1| 386|Homo sapiens Similar to expressed
sequence AI450757 protein.
Length = 386
Score = 35.5 bits (78), Expect = 0.18
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +2
Query: 383 STITRQARRLYVGNIPFGVTE-EETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFL 559
S I R +YVGN+ T ++ +EFF Q + + AG+ + FAF+
Sbjct: 175 SKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVK-FVRMAGDETQPTR------FAFV 227
Query: 560 EFRSIDETTQAMAFDGINFKGQKLK 634
EF + +A+AF+G+ F + LK
Sbjct: 228 EFADQNSVPRALAFNGVMFGDRPLK 252
>AF459094-1|AAL67778.1| 508|Homo sapiens splicing factor,
arginine/serine-rich 12 protein.
Length = 508
Score = 35.5 bits (78), Expect = 0.18
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +2
Query: 383 STITRQARRLYVGNIPFGVTE-EETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFL 559
S I R +YVGN+ T ++ +EFF Q + + AG+ + FAF+
Sbjct: 59 SKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVK-FVRMAGDETQPTR------FAFV 111
Query: 560 EFRSIDETTQAMAFDGINFKGQKLK 634
EF + +A+AF+G+ F + LK
Sbjct: 112 EFADQNSVPRALAFNGVMFGDRPLK 136
>Z95327-3|CAI42680.1| 577|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 34.3 bits (75), Expect = 0.41
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +2
Query: 362 AAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLD 541
A + V + R R ++VGNIP+ TEE+ + F++ + + V +
Sbjct: 2 AGLTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPV-----VSFRLVYDRETGKP 56
Query: 542 KNFAFLEFRSIDETTQAMA-FDGINFKGQKLK 634
K + F E++ + AM +G F G+ L+
Sbjct: 57 KGYGFCEYQDQETALSAMRNLNGREFSGRALR 88
>Z83819-6|CAB06072.2| 577|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 34.3 bits (75), Expect = 0.41
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +2
Query: 362 AAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLD 541
A + V + R R ++VGNIP+ TEE+ + F++ + + V +
Sbjct: 2 AGLTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPV-----VSFRLVYDRETGKP 56
Query: 542 KNFAFLEFRSIDETTQAMA-FDGINFKGQKLK 634
K + F E++ + AM +G F G+ L+
Sbjct: 57 KGYGFCEYQDQETALSAMRNLNGREFSGRALR 88
>M85085-1|AAA35724.1| 577|Homo sapiens cleavage stimulation factor
protein.
Length = 577
Score = 34.3 bits (75), Expect = 0.41
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +2
Query: 362 AAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLD 541
A + V + R R ++VGNIP+ TEE+ + F++ + + V +
Sbjct: 2 AGLTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPV-----VSFRLVYDRETGKP 56
Query: 542 KNFAFLEFRSIDETTQAMA-FDGINFKGQKLK 634
K + F E++ + AM +G F G+ L+
Sbjct: 57 KGYGFCEYQDQETALSAMRNLNGREFSGRALR 88
>BT009778-1|AAP88780.1| 577|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 34.3 bits (75), Expect = 0.41
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +2
Query: 362 AAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLD 541
A + V + R R ++VGNIP+ TEE+ + F++ + + V +
Sbjct: 2 AGLTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPV-----VSFRLVYDRETGKP 56
Query: 542 KNFAFLEFRSIDETTQAMA-FDGINFKGQKLK 634
K + F E++ + AM +G F G+ L+
Sbjct: 57 KGYGFCEYQDQETALSAMRNLNGREFSGRALR 88
>BC033135-1|AAH33135.1| 559|Homo sapiens Similar to cleavage
stimulation factor, 3' pre-RNA, subunit 2, 64kD protein.
Length = 559
Score = 34.3 bits (75), Expect = 0.41
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +2
Query: 362 AAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLD 541
A + V + R R ++VGNIP+ TEE+ + F++ + + V +
Sbjct: 1 AGLTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPV-----VSFRLVYDRETGKP 55
Query: 542 KNFAFLEFRSIDETTQAMA-FDGINFKGQKLK 634
K + F E++ + AM +G F G+ L+
Sbjct: 56 KGYGFCEYQDQETALSAMRNLNGREFSGRALR 87
>BC017712-1|AAH17712.1| 577|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 34.3 bits (75), Expect = 0.41
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +2
Query: 362 AAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLD 541
A + V + R R ++VGNIP+ TEE+ + F++ + + V +
Sbjct: 2 AGLTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPV-----VSFRLVYDRETGKP 56
Query: 542 KNFAFLEFRSIDETTQAMA-FDGINFKGQKLK 634
K + F E++ + AM +G F G+ L+
Sbjct: 57 KGYGFCEYQDQETALSAMRNLNGREFSGRALR 88
>X55733-1|CAA39265.1| 611|Homo sapiens initation factor 4B protein.
Length = 611
Score = 33.5 bits (73), Expect = 0.72
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +2
Query: 413 YVGNIPFGVTEEETMEFFNQQMHLSG--LAQAAGNPVLACQINLDKNFAFLEFRSIDETT 586
++GN+P+ VTEE EFF + +++S L + NP K F + EF +D
Sbjct: 99 FLGNLPYDVTEESIKEFF-RGLNISAVRLPREPSNPERL------KGFGYAEFEDLDSLL 151
Query: 587 QAMAFDGINFKGQKLK 634
A++ + + ++++
Sbjct: 152 SALSLNEESLGNRRIR 167
>CR456958-1|CAG33239.1| 611|Homo sapiens EIF4B protein.
Length = 611
Score = 33.5 bits (73), Expect = 0.72
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +2
Query: 413 YVGNIPFGVTEEETMEFFNQQMHLSG--LAQAAGNPVLACQINLDKNFAFLEFRSIDETT 586
++GN+P+ VTEE EFF + +++S L + NP K F + EF +D
Sbjct: 99 FLGNLPYDVTEESIKEFF-RGLNISAVRLPREPSNPERL------KGFGYAEFEDLDSLL 151
Query: 587 QAMAFDGINFKGQKLK 634
A++ + + ++++
Sbjct: 152 SALSLNEESLGNRRIR 167
>BC098437-1|AAH98437.1| 611|Homo sapiens eukaryotic translation
initiation factor 4B protein.
Length = 611
Score = 33.5 bits (73), Expect = 0.72
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +2
Query: 413 YVGNIPFGVTEEETMEFFNQQMHLSG--LAQAAGNPVLACQINLDKNFAFLEFRSIDETT 586
++GN+P+ VTEE EFF + +++S L + NP K F + EF +D
Sbjct: 99 FLGNLPYDVTEESIKEFF-RGLNISAVRLPREPSNPERL------KGFGYAEFEDLDSLL 151
Query: 587 QAMAFDGINFKGQKLK 634
A++ + + ++++
Sbjct: 152 SALSLNEESLGNRRIR 167
>BC073154-1|AAH73154.1| 611|Homo sapiens eukaryotic translation
initiation factor 4B protein.
Length = 611
Score = 33.5 bits (73), Expect = 0.72
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +2
Query: 413 YVGNIPFGVTEEETMEFFNQQMHLSG--LAQAAGNPVLACQINLDKNFAFLEFRSIDETT 586
++GN+P+ VTEE EFF + +++S L + NP K F + EF +D
Sbjct: 99 FLGNLPYDVTEESIKEFF-RGLNISAVRLPREPSNPERL------KGFGYAEFEDLDSLL 151
Query: 587 QAMAFDGINFKGQKLK 634
A++ + + ++++
Sbjct: 152 SALSLNEESLGNRRIR 167
>BC073139-1|AAH73139.1| 611|Homo sapiens eukaryotic translation
initiation factor 4B protein.
Length = 611
Score = 33.5 bits (73), Expect = 0.72
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +2
Query: 413 YVGNIPFGVTEEETMEFFNQQMHLSG--LAQAAGNPVLACQINLDKNFAFLEFRSIDETT 586
++GN+P+ VTEE EFF + +++S L + NP K F + EF +D
Sbjct: 99 FLGNLPYDVTEESIKEFF-RGLNISAVRLPREPSNPERL------KGFGYAEFEDLDSLL 151
Query: 587 QAMAFDGINFKGQKLK 634
A++ + + ++++
Sbjct: 152 SALSLNEESLGNRRIR 167
>BC029451-1|AAH29451.1| 425|Homo sapiens RNA binding motif protein
34 protein.
Length = 425
Score = 33.5 bits (73), Expect = 0.72
Identities = 24/97 (24%), Positives = 42/97 (43%)
Frame = +2
Query: 344 VADTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLA 523
+AD + V + T +R R ++VGN+P+ V E + F L + A V
Sbjct: 262 IADGFRIRVDLASETSSRDKRSVFVGNLPYKVEESAIEKHF-----LDCGSIMAVRIVRD 316
Query: 524 CQINLDKNFAFLEFRSIDETTQAMAFDGINFKGQKLK 634
+ K F ++ F + D A+ + G+KL+
Sbjct: 317 KMTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLR 353
>AL732292-3|CAM28277.1| 408|Homo sapiens novel protein protein.
Length = 408
Score = 33.5 bits (73), Expect = 0.72
Identities = 24/97 (24%), Positives = 42/97 (43%)
Frame = +2
Query: 344 VADTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLA 523
+AD + V + T +R R ++VGN+P+ V E + F L + A V
Sbjct: 245 IADGFRIRVDLASETSSRDKRSVFVGNLPYKVEESAIEKHF-----LDCGSIMAVRIVRD 299
Query: 524 CQINLDKNFAFLEFRSIDETTQAMAFDGINFKGQKLK 634
+ K F ++ F + D A+ + G+KL+
Sbjct: 300 KMTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLR 336
>AL732292-2|CAI21936.1| 430|Homo sapiens RNA binding motif protein
34 protein.
Length = 430
Score = 33.5 bits (73), Expect = 0.72
Identities = 24/97 (24%), Positives = 42/97 (43%)
Frame = +2
Query: 344 VADTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLA 523
+AD + V + T +R R ++VGN+P+ V E + F L + A V
Sbjct: 267 IADGFRIRVDLASETSSRDKRSVFVGNLPYKVEESAIEKHF-----LDCGSIMAVRIVRD 321
Query: 524 CQINLDKNFAFLEFRSIDETTQAMAFDGINFKGQKLK 634
+ K F ++ F + D A+ + G+KL+
Sbjct: 322 KMTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLR 358
>AL133418-4|CAM28326.1| 408|Homo sapiens novel protein protein.
Length = 408
Score = 33.5 bits (73), Expect = 0.72
Identities = 24/97 (24%), Positives = 42/97 (43%)
Frame = +2
Query: 344 VADTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLA 523
+AD + V + T +R R ++VGN+P+ V E + F L + A V
Sbjct: 245 IADGFRIRVDLASETSSRDKRSVFVGNLPYKVEESAIEKHF-----LDCGSIMAVRIVRD 299
Query: 524 CQINLDKNFAFLEFRSIDETTQAMAFDGINFKGQKLK 634
+ K F ++ F + D A+ + G+KL+
Sbjct: 300 KMTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLR 336
>AL133418-3|CAI22960.1| 430|Homo sapiens RNA binding motif protein
34 protein.
Length = 430
Score = 33.5 bits (73), Expect = 0.72
Identities = 24/97 (24%), Positives = 42/97 (43%)
Frame = +2
Query: 344 VADTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLA 523
+AD + V + T +R R ++VGN+P+ V E + F L + A V
Sbjct: 267 IADGFRIRVDLASETSSRDKRSVFVGNLPYKVEESAIEKHF-----LDCGSIMAVRIVRD 321
Query: 524 CQINLDKNFAFLEFRSIDETTQAMAFDGINFKGQKLK 634
+ K F ++ F + D A+ + G+KL+
Sbjct: 322 KMTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLR 358
>AK222528-1|BAD96248.1| 611|Homo sapiens eukaryotic translation
initiation factor 4B variant protein.
Length = 611
Score = 33.5 bits (73), Expect = 0.72
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +2
Query: 413 YVGNIPFGVTEEETMEFFNQQMHLSG--LAQAAGNPVLACQINLDKNFAFLEFRSIDETT 586
++GN+P+ VTEE EFF + +++S L + NP K F + EF +D
Sbjct: 99 FLGNLPYDVTEESIKEFF-RGLNISAVRLPREPSNPERL------KGFGYAEFEDLDSLL 151
Query: 587 QAMAFDGINFKGQKLK 634
A++ + + ++++
Sbjct: 152 SALSLNEESLGNKRIR 167
>AB076839-1|BAB82380.1| 611|Homo sapiens eukaryotic initiation
factor 4B protein.
Length = 611
Score = 33.5 bits (73), Expect = 0.72
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +2
Query: 413 YVGNIPFGVTEEETMEFFNQQMHLSG--LAQAAGNPVLACQINLDKNFAFLEFRSIDETT 586
++GN+P+ VTEE EFF + +++S L + NP K F + EF +D
Sbjct: 99 FLGNLPYDVTEESIKEFF-RGLNISAVRLPREPSNPERL------KGFGYAEFEDLDSLL 151
Query: 587 QAMAFDGINFKGQKLK 634
A++ + + ++++
Sbjct: 152 SALSLNEESLGNRRIR 167
>BC028239-1|AAH28239.1| 616|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa, tau variant
protein.
Length = 616
Score = 33.1 bits (72), Expect = 0.95
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = +2
Query: 362 AAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLD 541
+++ V + R R ++VGNIP+ TEE+ + F++ + + V +
Sbjct: 2 SSLAVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSV-----VSFRLVYDRETGKP 56
Query: 542 KNFAFLEFRSIDETTQAMA-FDGINFKGQKLK 634
K + F E++ + AM +G F G+ L+
Sbjct: 57 KGYGFCEYQDQETALSAMRNLNGREFSGRALR 88
>AY130299-1|AAN05429.1| 616|Homo sapiens tCstF-64 protein.
Length = 616
Score = 33.1 bits (72), Expect = 0.95
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = +2
Query: 362 AAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLD 541
+++ V + R R ++VGNIP+ TEE+ + F++ + + V +
Sbjct: 2 SSLAVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSV-----VSFRLVYDRETGKP 56
Query: 542 KNFAFLEFRSIDETTQAMA-FDGINFKGQKLK 634
K + F E++ + AM +G F G+ L+
Sbjct: 57 KGYGFCEYQDQETALSAMRNLNGREFSGRALR 88
>Y11289-1|CAA72157.1| 471|Homo sapiens p54nrb protein.
Length = 471
Score = 32.7 bits (71), Expect = 1.3
Identities = 36/125 (28%), Positives = 54/125 (43%), Gaps = 2/125 (1%)
Frame = +2
Query: 266 PPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTE 445
PPP P+ QA+ Q + D P G Q RL+VGN+P +TE
Sbjct: 36 PPP-----PPIPANGQQASSQ-NEGLTIDLKNFRKP--GEKTFTQRSRLFVGNLPPDITE 87
Query: 446 EETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAF--LEFRSIDETTQAMAFDGINFK 619
EE + F + AG I+ DK F F LE R++ E + + D + +
Sbjct: 88 EEMRKLFEKY-------GKAGEVF----IHKDKGFGFIRLETRTLAEIAK-VELDNMPLR 135
Query: 620 GQKLK 634
G++L+
Sbjct: 136 GKQLR 140
>U89867-1|AAC51852.1| 471|Homo sapiens nuclear matrix protein 55
protein.
Length = 471
Score = 32.7 bits (71), Expect = 1.3
Identities = 36/125 (28%), Positives = 54/125 (43%), Gaps = 2/125 (1%)
Frame = +2
Query: 266 PPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTE 445
PPP P+ QA+ Q + D P G Q RL+VGN+P +TE
Sbjct: 36 PPP-----PPIPANGQQASSQ-NEGLTIDLKNFRKP--GEKTFTQRSRLFVGNLPPDITE 87
Query: 446 EETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAF--LEFRSIDETTQAMAFDGINFK 619
EE + F + AG I+ DK F F LE R++ E + + D + +
Sbjct: 88 EEMRKLFEKY-------GKAGEVF----IHKDKGFGFIRLETRTLAEIAK-VELDNMPLR 135
Query: 620 GQKLK 634
G++L+
Sbjct: 136 GKQLR 140
>U02493-1|AAA03427.1| 471|Homo sapiens 54 kDa protein protein.
Length = 471
Score = 32.7 bits (71), Expect = 1.3
Identities = 36/125 (28%), Positives = 54/125 (43%), Gaps = 2/125 (1%)
Frame = +2
Query: 266 PPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTE 445
PPP P+ QA+ Q + D P G Q RL+VGN+P +TE
Sbjct: 36 PPP-----PPIPANGQQASSQ-NEGLTIDLKNFRKP--GEKTFTQRSRLFVGNLPPDITE 87
Query: 446 EETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAF--LEFRSIDETTQAMAFDGINFK 619
EE + F + AG I+ DK F F LE R++ E + + D + +
Sbjct: 88 EEMRKLFEKY-------GKAGEVF----IHKDKGFGFIRLETRTLAEIAK-VELDNMPLR 135
Query: 620 GQKLK 634
G++L+
Sbjct: 136 GKQLR 140
>L14599-1|AAC37578.1| 471|Homo sapiens protein ( Human mRNA,
complete cds. ).
Length = 471
Score = 32.7 bits (71), Expect = 1.3
Identities = 36/125 (28%), Positives = 54/125 (43%), Gaps = 2/125 (1%)
Frame = +2
Query: 266 PPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTE 445
PPP P+ QA+ Q + D P G Q RL+VGN+P +TE
Sbjct: 36 PPP-----PPIPANGQQASSQ-NEGLTIDLKNFRKP--GEKTFTQRSRLFVGNLPPDITE 87
Query: 446 EETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAF--LEFRSIDETTQAMAFDGINFK 619
EE + F + AG I+ DK F F LE R++ E + + D + +
Sbjct: 88 EEMRKLFEKY-------GKAGEVF----IHKDKGFGFIRLETRTLAEIAK-VELDNMPLR 135
Query: 620 GQKLK 634
G++L+
Sbjct: 136 GKQLR 140
>CR456761-1|CAG33042.1| 471|Homo sapiens NONO protein.
Length = 471
Score = 32.7 bits (71), Expect = 1.3
Identities = 36/125 (28%), Positives = 54/125 (43%), Gaps = 2/125 (1%)
Frame = +2
Query: 266 PPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTE 445
PPP P+ QA+ Q + D P G Q RL+VGN+P +TE
Sbjct: 36 PPP-----PPIPANGQQASSQ-NEGLTIDLKNFRKP--GEKTFTQRSRLFVGNLPPDITE 87
Query: 446 EETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAF--LEFRSIDETTQAMAFDGINFK 619
EE + F + AG I+ DK F F LE R++ E + + D + +
Sbjct: 88 EEMRKLFEKY-------GKAGEVF----IHKDKGFGFIRLETRTLAEIAK-VELDNMPLR 135
Query: 620 GQKLK 634
G++L+
Sbjct: 136 GKQLR 140
>BC069639-1|AAH69639.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 32.7 bits (71), Expect = 1.3
Identities = 36/125 (28%), Positives = 54/125 (43%), Gaps = 2/125 (1%)
Frame = +2
Query: 266 PPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTE 445
PPP P+ QA+ Q + D P G Q RL+VGN+P +TE
Sbjct: 36 PPP-----PPIPANGQQASSQ-NEGLTIDLKNFRKP--GEKTFTQRSRLFVGNLPPDITE 87
Query: 446 EETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAF--LEFRSIDETTQAMAFDGINFK 619
EE + F + AG I+ DK F F LE R++ E + + D + +
Sbjct: 88 EEMRKLFEKY-------GKAGEVF----IHKDKGFGFIRLETRTLAEIAK-VELDNMPLR 135
Query: 620 GQKLK 634
G++L+
Sbjct: 136 GKQLR 140
>BC069616-1|AAH69616.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 32.7 bits (71), Expect = 1.3
Identities = 36/125 (28%), Positives = 54/125 (43%), Gaps = 2/125 (1%)
Frame = +2
Query: 266 PPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTE 445
PPP P+ QA+ Q + D P G Q RL+VGN+P +TE
Sbjct: 36 PPP-----PPIPANGQQASSQ-NEGLTIDLKNFRKP--GEKTFTQRSRLFVGNLPPDITE 87
Query: 446 EETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAF--LEFRSIDETTQAMAFDGINFK 619
EE + F + AG I+ DK F F LE R++ E + + D + +
Sbjct: 88 EEMRKLFEKY-------GKAGEVF----IHKDKGFGFIRLETRTLAEIAK-VELDNMPLR 135
Query: 620 GQKLK 634
G++L+
Sbjct: 136 GKQLR 140
>BC028299-1|AAH28299.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 32.7 bits (71), Expect = 1.3
Identities = 36/125 (28%), Positives = 54/125 (43%), Gaps = 2/125 (1%)
Frame = +2
Query: 266 PPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTE 445
PPP P+ QA+ Q + D P G Q RL+VGN+P +TE
Sbjct: 36 PPP-----PPIPANGQQASSQ-NEGLTIDLKNFRKP--GEKTFTQRSRLFVGNLPPDITE 87
Query: 446 EETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAF--LEFRSIDETTQAMAFDGINFK 619
EE + F + AG I+ DK F F LE R++ E + + D + +
Sbjct: 88 EEMRKLFEKY-------GKAGEVF----IHKDKGFGFIRLETRTLAEIAK-VELDNMPLR 135
Query: 620 GQKLK 634
G++L+
Sbjct: 136 GKQLR 140
>BC012141-1|AAH12141.1| 471|Homo sapiens NONO protein protein.
Length = 471
Score = 32.7 bits (71), Expect = 1.3
Identities = 36/125 (28%), Positives = 54/125 (43%), Gaps = 2/125 (1%)
Frame = +2
Query: 266 PPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTE 445
PPP P+ QA+ Q + D P G Q RL+VGN+P +TE
Sbjct: 36 PPP-----PPIPANGQQASSQ-NEGLTIDLKNFRKP--GEKTFTQRSRLFVGNLPPDITE 87
Query: 446 EETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAF--LEFRSIDETTQAMAFDGINFK 619
EE + F + AG I+ DK F F LE R++ E + + D + +
Sbjct: 88 EEMRKLFEKY-------GKAGEVF----IHKDKGFGFIRLETRTLAEIAK-VELDNMPLR 135
Query: 620 GQKLK 634
G++L+
Sbjct: 136 GKQLR 140
>BC003129-1|AAH03129.1| 471|Homo sapiens NONO protein protein.
Length = 471
Score = 32.7 bits (71), Expect = 1.3
Identities = 36/125 (28%), Positives = 54/125 (43%), Gaps = 2/125 (1%)
Frame = +2
Query: 266 PPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTE 445
PPP P+ QA+ Q + D P G Q RL+VGN+P +TE
Sbjct: 36 PPP-----PPIPANGQQASSQ-NEGLTIDLKNFRKP--GEKTFTQRSRLFVGNLPPDITE 87
Query: 446 EETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAF--LEFRSIDETTQAMAFDGINFK 619
EE + F + AG I+ DK F F LE R++ E + + D + +
Sbjct: 88 EEMRKLFEKY-------GKAGEVF----IHKDKGFGFIRLETRTLAEIAK-VELDNMPLR 135
Query: 620 GQKLK 634
G++L+
Sbjct: 136 GKQLR 140
>BC002364-1|AAH02364.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 32.7 bits (71), Expect = 1.3
Identities = 36/125 (28%), Positives = 54/125 (43%), Gaps = 2/125 (1%)
Frame = +2
Query: 266 PPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTE 445
PPP P+ QA+ Q + D P G Q RL+VGN+P +TE
Sbjct: 36 PPP-----PPIPANGQQASSQ-NEGLTIDLKNFRKP--GEKTFTQRSRLFVGNLPPDITE 87
Query: 446 EETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAF--LEFRSIDETTQAMAFDGINFK 619
EE + F + AG I+ DK F F LE R++ E + + D + +
Sbjct: 88 EEMRKLFEKY-------GKAGEVF----IHKDKGFGFIRLETRTLAEIAK-VELDNMPLR 135
Query: 620 GQKLK 634
G++L+
Sbjct: 136 GKQLR 140
>BC070262-1|AAH70262.1| 266|Homo sapiens RNA binding motif protein
7 protein.
Length = 266
Score = 32.3 bits (70), Expect = 1.7
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
Frame = +2
Query: 377 VGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKN--- 547
+G+ R L+VGN+ VTEE E F+Q AG PV+ +I DK+
Sbjct: 1 MGAAAAEADRTLFVGNLETKVTEELLFELFHQ----------AG-PVIKVKIPKDKDGKP 49
Query: 548 --FAFLEFRSIDETTQAM-AFDGINFKGQKLK 634
FAF+ F+ AM +GI G+ +K
Sbjct: 50 KQFAFVNFKHEVSVPYAMNLLNGIRLYGRPIK 81
>BC034381-1|AAH34381.1| 266|Homo sapiens RNA binding motif protein
7 protein.
Length = 266
Score = 32.3 bits (70), Expect = 1.7
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
Frame = +2
Query: 377 VGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKN--- 547
+G+ R L+VGN+ VTEE E F+Q AG PV+ +I DK+
Sbjct: 1 MGAAAAEADRTLFVGNLETKVTEELLFELFHQ----------AG-PVIKVKIPKDKDGKP 49
Query: 548 --FAFLEFRSIDETTQAM-AFDGINFKGQKLK 634
FAF+ F+ AM +GI G+ +K
Sbjct: 50 KQFAFVNFKHEVSVPYAMNLLNGIKLYGRPIK 81
>AK002015-1|BAA92036.1| 267|Homo sapiens protein ( Homo sapiens
cDNA FLJ11153 fis, clone PLACE1006917, weakly similar to
HSH49 PROTEIN. ).
Length = 267
Score = 32.3 bits (70), Expect = 1.7
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
Frame = +2
Query: 377 VGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKN--- 547
+G+ R L+VGN+ VTEE E F+Q AG PV+ +I DK+
Sbjct: 1 MGAAAAEADRTLFVGNLETKVTEELLFELFHQ----------AG-PVIKVKIPKDKDGKP 49
Query: 548 --FAFLEFRSIDETTQAM-AFDGINFKGQKLK 634
FAF+ F+ AM +GI G+ +K
Sbjct: 50 KQFAFVNFKHEVSVPYAMNLLNGIKLYGRPIK 81
>AF156098-1|AAD39257.1| 266|Homo sapiens RNA binding motif protein
7 protein.
Length = 266
Score = 32.3 bits (70), Expect = 1.7
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
Frame = +2
Query: 377 VGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKN--- 547
+G+ R L+VGN+ VTEE E F+Q AG PV+ +I DK+
Sbjct: 1 MGAAAAEADRTLFVGNLETKVTEELLFELFHQ----------AG-PVIKVKIPKDKDGKP 49
Query: 548 --FAFLEFRSIDETTQAM-AFDGINFKGQKLK 634
FAF+ F+ AM +GI G+ +K
Sbjct: 50 KQFAFVNFKHEVSVPYAMNLLNGIKLYGRPIK 81
>AB209753-1|BAD92990.1| 155|Homo sapiens Hypothetical protein
FLJ11153 variant protein.
Length = 155
Score = 32.3 bits (70), Expect = 1.7
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
Frame = +2
Query: 377 VGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKN--- 547
+G+ R L+VGN+ VTEE E F+Q AG PV+ +I DK+
Sbjct: 7 MGAAAAEADRTLFVGNLETKVTEELLFELFHQ----------AG-PVIKVKIPKDKDGKP 55
Query: 548 --FAFLEFRSIDETTQAM-AFDGINFKGQKLK 634
FAF+ F+ AM +GI G+ +K
Sbjct: 56 KQFAFVNFKHEVSVPYAMNLLNGIKLYGRPIK 87
>CR457272-1|CAG33553.1| 357|Homo sapiens PSPC1 protein.
Length = 357
Score = 31.9 bits (69), Expect = 2.2
Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = +2
Query: 380 GSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAF- 556
G Q RL+VGN+P +TEE+ F + G P IN D+ F F
Sbjct: 38 GEKTYTQRCRLFVGNLPTDITEEDFKRLFERY----------GEP-SEVFINRDRGFGFI 86
Query: 557 -LEFRSIDETTQAMAFDGINFKGQKLK 634
LE R++ E +A DG K + L+
Sbjct: 87 RLESRTLAEIAKA-ELDGTILKSRPLR 112
>BC014184-1|AAH14184.2| 393|Homo sapiens PSPC1 protein protein.
Length = 393
Score = 31.9 bits (69), Expect = 2.2
Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = +2
Query: 380 GSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAF- 556
G Q RL+VGN+P +TEE+ F + G P IN D+ F F
Sbjct: 74 GEKTYTQRCRLFVGNLPTDITEEDFKRLFERY----------GEP-SEVFINRDRGFGFI 122
Query: 557 -LEFRSIDETTQAMAFDGINFKGQKLK 634
LE R++ E +A DG K + L+
Sbjct: 123 RLESRTLAEIAKA-ELDGTILKSRPLR 148
>BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 31.9 bits (69), Expect = 2.2
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +2
Query: 398 QARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSID 577
++ RL+V N+P+ TEE+ + F++ LS L P+ + K FAF+ F +
Sbjct: 400 ESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHY----PIDSL-TKKPKGFAFITFMFPE 454
Query: 578 ETTQAMA-FDGINFKGQKLKDSTST 649
+A + DG F+G+ L ST
Sbjct: 455 HAVKAYSEVDGQVFQGRMLHVLPST 479
>BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 31.9 bits (69), Expect = 2.2
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +2
Query: 398 QARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSID 577
++ RL+V N+P+ TEE+ + F++ LS L P+ + K FAF+ F +
Sbjct: 400 ESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHY----PIDSL-TKKPKGFAFITFMFPE 454
Query: 578 ETTQAMA-FDGINFKGQKLKDSTST 649
+A + DG F+G+ L ST
Sbjct: 455 HAVKAYSEVDGQVFQGRMLHVLPST 479
>AL354808-5|CAI41005.1| 248|Homo sapiens paraspeckle component 1
protein.
Length = 248
Score = 31.9 bits (69), Expect = 2.2
Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = +2
Query: 380 GSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAF- 556
G Q RL+VGN+P +TEE+ F + G P IN D+ F F
Sbjct: 74 GEKTYTQRCRLFVGNLPTDITEEDFKRLFERY----------GEP-SEVFINRDRGFGFI 122
Query: 557 -LEFRSIDETTQAMAFDGINFKGQKLK 634
LE R++ E +A DG K + L+
Sbjct: 123 RLESRTLAEIAKA-ELDGTILKSRPLR 148
>AL354808-4|CAI41004.1| 523|Homo sapiens paraspeckle component 1
protein.
Length = 523
Score = 31.9 bits (69), Expect = 2.2
Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = +2
Query: 380 GSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAF- 556
G Q RL+VGN+P +TEE+ F + G P IN D+ F F
Sbjct: 74 GEKTYTQRCRLFVGNLPTDITEEDFKRLFERY----------GEP-SEVFINRDRGFGFI 122
Query: 557 -LEFRSIDETTQAMAFDGINFKGQKLK 634
LE R++ E +A DG K + L+
Sbjct: 123 RLESRTLAEIAKA-ELDGTILKSRPLR 148
>AK001817-1|BAA91924.1| 357|Homo sapiens protein ( Homo sapiens
cDNA FLJ10955 fis, clone PLACE1000406, moderately
similar to PTB-ASSOCIATED SPLICING FACTOR. ).
Length = 357
Score = 31.9 bits (69), Expect = 2.2
Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = +2
Query: 380 GSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAF- 556
G Q RL+VGN+P +TEE+ F + G P IN D+ F F
Sbjct: 38 GEKTYTQRCRLFVGNLPTDITEEDFKRLFERY----------GEP-SEVFINRDRGFGFI 86
Query: 557 -LEFRSIDETTQAMAFDGINFKGQKLK 634
LE R++ E +A DG K + L+
Sbjct: 87 RLESRTLAEIAKA-ELDGTILKSRPLR 112
>AF449627-1|AAL59602.1| 393|Homo sapiens paraspeckle protein 1 beta
isoform protein.
Length = 393
Score = 31.9 bits (69), Expect = 2.2
Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = +2
Query: 380 GSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAF- 556
G Q RL+VGN+P +TEE+ F + G P IN D+ F F
Sbjct: 74 GEKTYTQRCRLFVGNLPTDITEEDFKRLFERY----------GEP-SEVFINRDRGFGFI 122
Query: 557 -LEFRSIDETTQAMAFDGINFKGQKLK 634
LE R++ E +A DG K + L+
Sbjct: 123 RLESRTLAEIAKA-ELDGTILKSRPLR 148
>AF448795-1|AAL59601.1| 523|Homo sapiens paraspeckle protein 1
alpha isoform protein.
Length = 523
Score = 31.9 bits (69), Expect = 2.2
Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = +2
Query: 380 GSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAF- 556
G Q RL+VGN+P +TEE+ F + G P IN D+ F F
Sbjct: 74 GEKTYTQRCRLFVGNLPTDITEEDFKRLFERY----------GEP-SEVFINRDRGFGFI 122
Query: 557 -LEFRSIDETTQAMAFDGINFKGQKLK 634
LE R++ E +A DG K + L+
Sbjct: 123 RLESRTLAEIAKA-ELDGTILKSRPLR 148
>AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein.
Length = 973
Score = 31.9 bits (69), Expect = 2.2
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +2
Query: 398 QARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSID 577
++ RL+V N+P+ TEE+ + F++ LS L P+ + K FAF+ F +
Sbjct: 413 ESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHY----PIDSL-TKKPKGFAFITFMFPE 467
Query: 578 ETTQAMA-FDGINFKGQKLKDSTST 649
+A + DG F+G+ L ST
Sbjct: 468 HAVKAYSEVDGQVFQGRMLHVLPST 492
>BX640912-1|CAE45953.1| 613|Homo sapiens hypothetical protein
protein.
Length = 613
Score = 31.5 bits (68), Expect = 2.9
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = +2
Query: 377 VGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQIN---LDKN 547
+G I+ RL+VG+IP T+E +E F++ ++GL + + +L Q + ++
Sbjct: 214 LGVCISVANNRLFVGSIPKNKTKENILEEFSK---VTGLTEGLVDVILYHQPDDKKKNRG 270
Query: 548 FAFLEFRSIDETTQA 592
F FLE+ QA
Sbjct: 271 FCFLEYEDHKSAAQA 285
>BC001449-1|AAH01449.1| 636|Homo sapiens HNRPR protein protein.
Length = 636
Score = 31.5 bits (68), Expect = 2.9
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = +2
Query: 377 VGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQIN---LDKN 547
+G I+ RL+VG+IP T+E +E F++ ++GL + + +L Q + ++
Sbjct: 237 LGVCISVANNRLFVGSIPKNKTKENILEEFSK---VTGLTEGLVDVILYHQPDDKKKNRG 293
Query: 548 FAFLEFRSIDETTQA 592
F FLE+ QA
Sbjct: 294 FCFLEYEDHKSAAQA 308
>AL109936-4|CAI19027.1| 636|Homo sapiens heterogeneous nuclear
ribonucleoprotein R protein.
Length = 636
Score = 31.5 bits (68), Expect = 2.9
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = +2
Query: 377 VGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQIN---LDKN 547
+G I+ RL+VG+IP T+E +E F++ ++GL + + +L Q + ++
Sbjct: 237 LGVCISVANNRLFVGSIPKNKTKENILEEFSK---VTGLTEGLVDVILYHQPDDKKKNRG 293
Query: 548 FAFLEFRSIDETTQA 592
F FLE+ QA
Sbjct: 294 FCFLEYEDHKSAAQA 308
>AK222574-1|BAD96294.1| 616|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa, tau variant
variant protein.
Length = 616
Score = 31.1 bits (67), Expect = 3.8
Identities = 21/92 (22%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = +2
Query: 362 AAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLD 541
+++ V + R R ++VG+IP+ TEE+ + F++ + + V +
Sbjct: 2 SSLAVRDPAMDRSLRSVFVGSIPYEATEEQLKDIFSEVGSV-----VSFRLVYDRETGKP 56
Query: 542 KNFAFLEFRSIDETTQAMA-FDGINFKGQKLK 634
K + F E++ + AM +G F G+ L+
Sbjct: 57 KGYGFCEYQDQETALSAMRNLNGREFSGRALR 88
>AM295005-1|CAL25726.1| 289|Homo sapiens boll protein protein.
Length = 289
Score = 30.7 bits (66), Expect = 5.1
Identities = 24/115 (20%), Positives = 53/115 (46%), Gaps = 8/115 (6%)
Frame = +2
Query: 311 MQAAGQIPANIVADTPQAAVPVVGSTITRQAR-------RLYVGNIPFGVTEEETMEFFN 469
MQ + Q+ + ++ +P PV + T R R++VG I F E + +FF+
Sbjct: 1 MQTSNQMQTDSLSPSPNPVSPVPLNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFS 60
Query: 470 QQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETTQAM-AFDGINFKGQKL 631
Q + + ++ + + K + F+ F + ++ + + + +N+K +KL
Sbjct: 61 QYGSVKEV------KIVNDRAGVSKGYGFVTFETQEDAQKILQEAEKLNYKDKKL 109
>AL450998-10|CAH70858.1| 3664|Homo sapiens SMART/HDAC1 associated
repressor protein (SHARP) protein.
Length = 3664
Score = 30.7 bits (66), Expect = 5.1
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 389 ITRQARRLYVGNIPFGVTEEETMEFFNQ 472
+ R+ R L+VGN+P V EE+ +E F +
Sbjct: 1 MVRETRHLWVGNLPENVREEKIIEHFKR 28
>AL034555-4|CAI19526.1| 3664|Homo sapiens SMART/HDAC1 associated
repressor protein (SHARP) protein.
Length = 3664
Score = 30.7 bits (66), Expect = 5.1
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 389 ITRQARRLYVGNIPFGVTEEETMEFFNQ 472
+ R+ R L+VGN+P V EE+ +E F +
Sbjct: 1 MVRETRHLWVGNLPENVREEKIIEHFKR 28
>AK093453-1|BAC04171.1| 339|Homo sapiens protein ( Homo sapiens
cDNA FLJ36134 fis, clone TESTI2024648, weakly similar to
Homo sapiens germline specific RNA binding protein
(DAZL1) mRNA. ).
Length = 339
Score = 30.7 bits (66), Expect = 5.1
Identities = 24/115 (20%), Positives = 53/115 (46%), Gaps = 8/115 (6%)
Frame = +2
Query: 311 MQAAGQIPANIVADTPQAAVPVVGSTITRQAR-------RLYVGNIPFGVTEEETMEFFN 469
MQ + Q+ + ++ +P PV + T R R++VG I F E + +FF+
Sbjct: 1 MQTSNQMQTDSLSPSPNPVSPVPLNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFS 60
Query: 470 QQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETTQAM-AFDGINFKGQKL 631
Q + + ++ + + K + F+ F + ++ + + + +N+K +KL
Sbjct: 61 QYGSVKEV------KIVNDRAGVSKGYGFVTFETQEDAQKILQEAEKLNYKDKKL 109
>AF356524-1|AAK52750.1| 3664|Homo sapiens nuclear receptor
transcription cofactor protein.
Length = 3664
Score = 30.7 bits (66), Expect = 5.1
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 389 ITRQARRLYVGNIPFGVTEEETMEFFNQ 472
+ R+ R L+VGN+P V EE+ +E F +
Sbjct: 1 MVRETRHLWVGNLPENVREEKIIEHFKR 28
>X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage
factor I 68 kDa subunit protein.
Length = 551
Score = 29.9 bits (64), Expect = 8.9
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 329 IPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETME 460
+P + D + A P V T T + LY+GN+ + T+E+ E
Sbjct: 56 LPPTVGDDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTE 99
>X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein.
Length = 551
Score = 29.9 bits (64), Expect = 8.9
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 329 IPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETME 460
+P + D + A P V T T + LY+GN+ + T+E+ E
Sbjct: 56 LPPTVGDDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTE 99
>D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein.
Length = 172
Score = 29.9 bits (64), Expect = 8.9
Identities = 17/77 (22%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 407 RLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETT 586
+L+VG + F E+ + F++ +S + + + F F+ F +ID+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDR-----ETQRSRGFGFVTFENIDDAK 61
Query: 587 QA-MAFDGINFKGQKLK 634
A MA +G + G++++
Sbjct: 62 DAMMAMNGKSVDGRQIR 78
>BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 29.9 bits (64), Expect = 8.9
Identities = 17/77 (22%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 407 RLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETT 586
+L+VG + F E+ + F++ +S + + + F F+ F +ID+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDR-----ETQRSRGFGFVTFENIDDAK 61
Query: 587 QA-MAFDGINFKGQKLK 634
A MA +G + G++++
Sbjct: 62 DAMMAMNGKSVDGRQIR 78
>BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein.
Length = 478
Score = 29.9 bits (64), Expect = 8.9
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 329 IPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETME 460
+P + D + A P V T T + LY+GN+ + T+E+ E
Sbjct: 56 LPPTVGDDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTE 99
>BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 29.9 bits (64), Expect = 8.9
Identities = 17/77 (22%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 407 RLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETT 586
+L+VG + F E+ + F++ +S + + + F F+ F +ID+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDR-----ETQRSRGFGFVTFENIDDAK 61
Query: 587 QA-MAFDGINFKGQKLK 634
A MA +G + G++++
Sbjct: 62 DAMMAMNGKSVDGRQIR 78
>BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein.
Length = 588
Score = 29.9 bits (64), Expect = 8.9
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 329 IPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETME 460
+P + D + A P V T T + LY+GN+ + T+E+ E
Sbjct: 56 LPPTVGDDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTE 99
>BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 29.9 bits (64), Expect = 8.9
Identities = 17/77 (22%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 407 RLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETT 586
+L+VG + F E+ + F++ +S + + + F F+ F +ID+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDR-----ETQRSRGFGFVTFENIDDAK 61
Query: 587 QA-MAFDGINFKGQKLK 634
A MA +G + G++++
Sbjct: 62 DAMMAMNGKSVDGRQIR 78
>AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and
polyadenylation specific factor 6, 68 kD subunit variant
protein.
Length = 551
Score = 29.9 bits (64), Expect = 8.9
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 329 IPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETME 460
+P + D + A P V T T + LY+GN+ + T+E+ E
Sbjct: 56 LPPTVGDDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTE 99
>AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RNA
binding protein protein.
Length = 172
Score = 29.9 bits (64), Expect = 8.9
Identities = 17/77 (22%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 407 RLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETT 586
+L+VG + F E+ + F++ +S + + + F F+ F +ID+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDR-----ETQRSRGFGFVTFENIDDAK 61
Query: 587 QA-MAFDGINFKGQKLK 634
A MA +G + G++++
Sbjct: 62 DAMMAMNGKSVDGRQIR 78
>AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein.
Length = 172
Score = 29.9 bits (64), Expect = 8.9
Identities = 17/77 (22%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 407 RLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETT 586
+L+VG + F E+ + F++ +S + + + F F+ F +ID+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDR-----ETQRSRGFGFVTFENIDDAK 61
Query: 587 QA-MAFDGINFKGQKLK 634
A MA +G + G++++
Sbjct: 62 DAMMAMNGKSVDGRQIR 78
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,489,342
Number of Sequences: 237096
Number of extensions: 2201492
Number of successful extensions: 8641
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 8442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8628
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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