Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0243
(686 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g07870.1 68418.m00906 transferase family protein similar to a... 36 0.019
At4g34140.1 68417.m04845 D111/G-patch domain-containing protein ... 31 0.54
At3g58050.1 68416.m06471 expressed protein 30 1.3
At2g40620.1 68415.m05010 bZIP transcription factor family protei... 30 1.3
At5g38490.1 68418.m04652 hypothetical protein contains Pfam prof... 29 2.2
At3g07500.1 68416.m00894 far-red impaired responsive family prot... 29 2.2
At5g04770.1 68418.m00492 amino acid permease family protein simi... 29 2.9
At3g10600.1 68416.m01275 amino acid permease family protein simi... 29 2.9
At3g02260.1 68416.m00207 auxin transport protein (BIG) nearly id... 29 2.9
At5g52975.1 68418.m06577 expressed protein 29 3.8
At5g26190.1 68418.m03116 DC1 domain-containing protein contains ... 28 5.0
At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identic... 28 5.0
At4g21120.1 68417.m03054 amino acid permease family protein simi... 28 5.0
At2g34960.1 68415.m04290 amino acid permease family protein simi... 28 5.0
At1g20020.1 68414.m02507 ferredoxin--NADP(+) reductase, putative... 28 5.0
At3g46350.1 68416.m05020 leucine-rich repeat protein kinase, put... 28 6.7
At3g26070.1 68416.m03246 plastid-lipid associated protein PAP / ... 28 6.7
At3g61580.1 68416.m06897 delta-8 sphingolipid desaturase (SLD1) ... 27 8.8
At2g11200.1 68415.m01202 F-box family protein 27 8.8
>At5g07870.1 68418.m00906 transferase family protein similar to
anthranilate N-hydroxycinnamoyl/benzoyltransferase,
Dianthus caryophyllus [gi:2239091]; contains Pfam
transferase family domain PF002458
Length = 464
Score = 36.3 bits (80), Expect = 0.019
Identities = 35/121 (28%), Positives = 51/121 (42%), Gaps = 1/121 (0%)
Frame = +1
Query: 166 SLFAFHGKLNEEMEGLESGHWSRDITKAKNGVWTFRDRNAQLKLGDKIYFWTYVIKDGLG 345
SLF H LN + G S +T+ +GV+ N L GD FW + + L
Sbjct: 139 SLFDHHKALNRD--GYTMSLLSIKVTELVDGVFIGLSMNHSL--GDGSSFWQFF--NSLS 192
Query: 346 YRQDNGEWTVTEFVNENGNPV-DVANPPVATSTTGPLQTPQQASTPIVRPEQTCQTSETV 522
++ E T+ N N N + + NPP+ TGP+ S P P ++ SE
Sbjct: 193 EIFNSQEETIGNNNNNNNNALLCLKNPPIIREATGPMY-----SLPFSEPNESLSQSEPP 247
Query: 523 V 525
V
Sbjct: 248 V 248
>At4g34140.1 68417.m04845 D111/G-patch domain-containing protein
contains Pfam PF01585: G-patch domain
Length = 418
Score = 31.5 bits (68), Expect = 0.54
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 316 WTYVIKDGLGYRQDNGEWTVTEFVNENGNP 405
W Y KDG Y+ +NGE+ E+ + NP
Sbjct: 48 WYYCSKDGRYYKHENGEYVPLEYDESSVNP 77
>At3g58050.1 68416.m06471 expressed protein
Length = 1209
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = +1
Query: 85 AQYIVPPAKLEAIYPAGLRVTVPDDGFSLFAFHGKLNEEMEGLESGHWSRDITKAKNGV 261
AQ + PP +L + P + TV +D FSLF F G + GL +G S+ +K+G+
Sbjct: 1123 AQNLEPPLELNCLAPPETQ-TVNEDSFSLFHFSGPV-----GLSTGSKSKP-AHSKDGI 1174
>At2g40620.1 68415.m05010 bZIP transcription factor family protein
identical to b-Zip DNA binding protein GI:2246376 from
[Arabidopsis thaliana]; contains a bZIP transcription
factor basic domain signature (PDOC00036)
Length = 367
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 399 ESSRRSQPTCGHIYHGSTADTPTSQHSY 482
+SSR + PT + H +T++ P HSY
Sbjct: 301 QSSRTNPPTAHQLMHHATSNAPAQSHSY 328
>At5g38490.1 68418.m04652 hypothetical protein contains Pfam profile
PF03754: Domain of unknown function (DUF313)
Length = 364
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 214 ESGHWSRDITKAKNGVWTFRDRNAQLKLGDKIYFWTYVIKDGLGYRQD 357
+SGH + + T N W +++ LK+GDKI WT+ + L + D
Sbjct: 317 DSGHGTLNYTL--NWGWNDVVKSSSLKVGDKISLWTFRCRGVLCFALD 362
>At3g07500.1 68416.m00894 far-red impaired responsive family protein
/ FAR1 family protein weak similarity to far-red
impaired response protein [Arabidopsis thaliana]
GI:5764395; contains Pfam profile PF03101: FAR1 family
Length = 217
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 349 RQDNGEWTVTEFVNENGNPVDVANPPVATSTTGPLQTPQQASTPI 483
R+ +G W VT+F E+ +P+ +P V + P QTP + I
Sbjct: 115 REKSGTWLVTKFEKEHNHPLLPLSPNVRRNFQLP-QTPDEKDAKI 158
>At5g04770.1 68418.m00492 amino acid permease family protein similar
to cationic amino acid transporter-1 [Rattus norvegicus]
GI:1589917; contains Pfam profile PF00324: Amino acid
permease
Length = 583
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 390 IDEFCYSPFAVILPISEAILDYIR 319
+ FCY+ FAV LP++ YIR
Sbjct: 108 LSAFCYTEFAVHLPVAGGAFSYIR 131
>At3g10600.1 68416.m01275 amino acid permease family protein similar
to SP|Q09143 High-affinity cationic amino acid
transporter-1 (CAT-1) {Mus musculus}; contains Pfam
profile PF00324: Amino acid permease
Length = 584
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 390 IDEFCYSPFAVILPISEAILDYIR 319
+ FCY+ FAV LP++ YIR
Sbjct: 107 LSAFCYTEFAVHLPVAGGAFSYIR 130
>At3g02260.1 68416.m00207 auxin transport protein (BIG) nearly
identical to auxin transport protein; BIG [Arabidopsis
thaliana] GI:21779966; contains Pfam profiles PF02207:
Putative zinc finger in N-recognin, PF00569: Zinc finger
ZZ type
Length = 5098
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 457 TPQQASTPIVRPEQTCQTSETVVQGRDKICKGTLIFSDEFEKNSLKI 597
TP + T EQT S VQ +D+ G + +S E E+N+L +
Sbjct: 3815 TPPKPDT--AEKEQTMGKSAPAVQEKDENAAGVIKYSSESEENNLNV 3859
>At5g52975.1 68418.m06577 expressed protein
Length = 121
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +1
Query: 34 IIILSVLVTICSAQPRAAQYIVPPAKLEAIYPAGLRVTVPDDGFSLFAFHGKLNEEMEGL 213
I+I+S+ V I Q A PP + I+P GL + + SLF G + E + +
Sbjct: 10 ILIVSLCVAIFVTQG-VAHMQTPPTTVPGIFPPGLPIDLVKCWSSLFNVEGCVLEIAKSI 68
Query: 214 ESG 222
SG
Sbjct: 69 FSG 71
>At5g26190.1 68418.m03116 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 556
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = -1
Query: 668 HQLGRHEWIIGFFRKSNFSSPTRQILRLFFSNSSLKIKVPLQILSRP 528
H L HE IIG+ R+ ++L +F++ S +V + L RP
Sbjct: 71 HPLKLHERIIGYRRRDQCCLCRYKLLDMFYNCSRCMFEVCMACLKRP 117
>At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identical
to gi_11935088_gb_AAG41964
Length = 209
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 418 NPPVATSTTGPLQTP-QQASTPIVRPEQTCQTSET 519
+P V + TT P +TP AS+P+ P+ SE+
Sbjct: 45 SPAVTSPTTAPAKTPTASASSPVESPKSPAPVSES 79
>At4g21120.1 68417.m03054 amino acid permease family protein similar
to cationic amino acid transporter-1 [Rattus norvegicus]
GI:1589917; contains Pfam profile PF00324: Amino acid
permease
Length = 594
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -3
Query: 402 IPIFIDEFCYSPFAVILPISEAILDYIRPEI 310
+ + FCY+ FAV +P++ Y+R E+
Sbjct: 117 VSAMLSVFCYTEFAVEIPVAGGSFAYLRVEL 147
>At2g34960.1 68415.m04290 amino acid permease family protein similar
to cationic amino acid transporter 3 [Rattus norvegicus]
GI:2116552; contains Pfam profile PF00324: Amino acid
permease
Length = 569
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 381 FCYSPFAVILPISEAILDYIRPEINLISQF 292
FCY+ FAV +P++ Y+R E+ + F
Sbjct: 118 FCYTEFAVEIPVAGGSFAYLRIELGDFAAF 147
>At1g20020.1 68414.m02507 ferredoxin--NADP(+) reductase, putative /
adrenodoxin reductase, putative strong similarity to
Ferredoxin--NADP reductase, chloroplast precursor (EC
1.18.1.2) (FNR) from {Pisum sativum} SP|P10933,
{Mesembryanthemum crystallinum} SP|P41343, {Spinacia
oleracea} SP|P00455, [Capsicum annuum] GI:6899972
Length = 369
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = +1
Query: 346 YRQDNGEWTVTEFVNENGNPVDVANPPVATSTTGPLQTPQQASTPIVRPEQTCQTSETV 522
YR+ + + +++NG P V +A+S G L + S + R T ETV
Sbjct: 125 YREGQSVGVIADGIDKNGKPHKVRLYSIASSALGDLGNSETVSLCVKRLVYTNDQGETV 183
>At3g46350.1 68416.m05020 leucine-rich repeat protein kinase,
putative contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 871
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = -1
Query: 602 RQILRLFFSNSSLKIKVPLQILSRPWTT-VSDVW-HVCSGLTIGVLACWGVCSGPVVDVA 429
R +R FSNS I+ P+ + R W + D W + + LT+ + + ++ A
Sbjct: 196 RTFVRFCFSNSVEDIRFPMDVHDRMWESYFDDDWTQISTSLTVNTSDSFRLPQAALITAA 255
Query: 428 T 426
T
Sbjct: 256 T 256
>At3g26070.1 68416.m03246 plastid-lipid associated protein PAP /
fibrillin family protein contains Pfam profile PF04755:
PAP_fibrillin
Length = 242
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 485 LDRNRRAKRQKQWSKAAIKSVREL*SSVTSLKRIALRFDEL 607
L RN RA++QKQ + ++++ L T+ LR D+L
Sbjct: 62 LTRNGRAEKQKQLKQELLEAIEPLERGATASPDDQLRIDQL 102
>At3g61580.1 68416.m06897 delta-8 sphingolipid desaturase (SLD1)
identical to delta-8 sphingolipid desaturase GI:3819710
from [Arabidopsis thaliana]; contains Pfam profile
PF00487: Fatty acid desaturase; contains Pfam profile
PF00173: Heme/Steroid binding domain
Length = 449
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/64 (23%), Positives = 28/64 (43%)
Frame = +2
Query: 398 GIQ*T*PTHLWPHLPRVHCRHPNKPALLSLDRNRRAKRQKQWSKAAIKSVREL*SSVTSL 577
G+Q HL+P LPR H R + ++ R W +A + ++ L ++
Sbjct: 370 GLQFQLEHHLFPRLPRCHLRKVSPVVQELCKKHNLPYRSMSWFEANVLTINTLKTAAYQA 429
Query: 578 KRIA 589
+ +A
Sbjct: 430 RDVA 433
>At2g11200.1 68415.m01202 F-box family protein
Length = 154
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/39 (25%), Positives = 23/39 (58%)
Frame = -1
Query: 680 KRWSHQLGRHEWIIGFFRKSNFSSPTRQILRLFFSNSSL 564
K+W+ +L ++ + + RKS ++ ++ L + +SSL
Sbjct: 36 KKWNRRLSKYRFTKKYIRKSRSATADKEFLAIMMLDSSL 74
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,196,465
Number of Sequences: 28952
Number of extensions: 352253
Number of successful extensions: 1196
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1196
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1457719448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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