Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0241
(505 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0394 - 23084485-23084577,23084677-23084802,23085134-230852... 79 2e-15
06_01_0539 + 3869156-3869908 48 4e-06
06_01_0529 + 3831100-3831852 48 4e-06
06_01_0479 + 3419657-3420337 48 4e-06
09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341 45 4e-05
08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323 43 2e-04
05_05_0306 - 23977543-23977614,23977709-23977799,23978296-239783... 40 9e-04
03_03_0187 + 15253000-15253207,15253281-15253370,15254338-152544... 39 0.002
02_05_0057 + 25472872-25472912,25473012-25473157,25474008-254740... 39 0.002
03_01_0568 - 4192514-4192606,4192694-4192753,4192837-4192932,419... 32 0.30
10_01_0063 - 827069-827089,827444-829384,830582-830593 30 1.2
01_06_1091 + 34464923-34465026,34465124-34465163,34465245-344653... 29 1.6
02_02_0088 - 6655493-6655601,6656057-6656259,6656382-6656594,665... 29 2.1
11_06_0766 - 27115441-27115760,27115878-27116025,27116213-271174... 28 4.9
04_03_0614 + 18038848-18040287 28 4.9
04_03_0613 + 18034727-18036175 27 6.5
10_05_0076 + 8872765-8872932,8874727-8874822,8875843-8875955,887... 27 8.6
01_05_0208 - 19291953-19292552,19293027-19293134,19293231-192933... 27 8.6
>11_06_0394 -
23084485-23084577,23084677-23084802,23085134-23085236,
23085895-23085953,23086418-23086519,23086601-23086714,
23087666-23087746,23088073-23088154,23088504-23088556
Length = 270
Score = 79.0 bits (186), Expect = 2e-15
Identities = 36/65 (55%), Positives = 49/65 (75%)
Frame = +2
Query: 188 LAPLPIGICTSEGVVLAVGERITSTLMEPTTIEKIVEVDRHIGCAVSGLMGDFRTLFERA 367
L IG+ T +GVVLAV +R+TS L+EP+++EKI+E+D HIGCA+SGL+ D RTL E A
Sbjct: 46 LGSTAIGLKTKDGVVLAVEKRVTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHA 105
Query: 368 PVNVK 382
V +
Sbjct: 106 RVETQ 110
Score = 57.6 bits (133), Expect = 5e-09
Identities = 42/113 (37%), Positives = 54/113 (47%)
Frame = +1
Query: 142 EGRLFQVEYAIEAIKLGSTANWHLYFGGSCFGRGRKDNFNFDGTHDH*KDC*SRSTHWLR 321
EGRLFQVEYAIEAIKLGSTA G ++ K
Sbjct: 31 EGRLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLLEPSSVEKIMEIDEHIGCA 90
Query: 322 RFGSDGRLQDLI*KGPSECQNHWFVYNERMSVESCAQALSNLTIQFGDTDDDS 480
G + L+ E QNH F Y E M+VES QA+ +L ++FG+ D++S
Sbjct: 91 MSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQAICDLALRFGEGDEES 143
Score = 29.1 bits (62), Expect = 2.1
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +3
Query: 105 SEYDRGVNTFSP 140
+EYDRGVNTFSP
Sbjct: 19 TEYDRGVNTFSP 30
>06_01_0539 + 3869156-3869908
Length = 250
Score = 48.0 bits (109), Expect = 4e-06
Identities = 21/65 (32%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Frame = +2
Query: 203 IGICTSEGVVLAVGERITSTLMEPT-TIEKIVEVDRHIGCAVSGLMGDFRTLFERAPVNV 379
+G+ ++GVVL +++TS L++ + + EK+ ++D H+ CAV+G+M D L A ++
Sbjct: 35 LGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHA 94
Query: 380 KTTGL 394
+ L
Sbjct: 95 QRYAL 99
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = +1
Query: 142 EGRLFQVEYAIEAI 183
EGRL+QVEYA+EAI
Sbjct: 15 EGRLYQVEYAMEAI 28
>06_01_0529 + 3831100-3831852
Length = 250
Score = 48.0 bits (109), Expect = 4e-06
Identities = 21/65 (32%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Frame = +2
Query: 203 IGICTSEGVVLAVGERITSTLMEPT-TIEKIVEVDRHIGCAVSGLMGDFRTLFERAPVNV 379
+G+ ++GVVL +++TS L++ + + EK+ ++D H+ CAV+G+M D L A ++
Sbjct: 35 LGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHA 94
Query: 380 KTTGL 394
+ L
Sbjct: 95 QRYAL 99
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = +1
Query: 142 EGRLFQVEYAIEAI 183
EGRL+QVEYA+EAI
Sbjct: 15 EGRLYQVEYAMEAI 28
>06_01_0479 + 3419657-3420337
Length = 226
Score = 48.0 bits (109), Expect = 4e-06
Identities = 21/65 (32%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Frame = +2
Query: 203 IGICTSEGVVLAVGERITSTLMEPT-TIEKIVEVDRHIGCAVSGLMGDFRTLFERAPVNV 379
+G+ ++GVVL +++TS L++ + + EK+ ++D H+ CAV+G+M D L A ++
Sbjct: 11 LGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHA 70
Query: 380 KTTGL 394
+ L
Sbjct: 71 QRYAL 75
>09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341
Length = 249
Score = 44.8 bits (101), Expect = 4e-05
Identities = 22/61 (36%), Positives = 34/61 (55%)
Frame = +2
Query: 203 IGICTSEGVVLAVGERITSTLMEPTTIEKIVEVDRHIGCAVSGLMGDFRTLFERAPVNVK 382
+G+ S+ VVL V ++ T L + ++ KI +D HI A +GL D R L RA V +
Sbjct: 34 VGVRGSDTVVLGVEKKSTPKLQDSRSVRKIASLDTHIALACAGLKADARVLINRARVECQ 93
Query: 383 T 385
+
Sbjct: 94 S 94
Score = 33.5 bits (73), Expect = 0.099
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
Frame = +1
Query: 142 EGRLFQVEYAIEAIKLGSTANWHLYFGGSCFGRGRKDNFNFDGTHDH*KDC*SRSTH-WL 318
+G LFQVEYA+EA++ G+ A G +K + K S TH L
Sbjct: 14 DGHLFQVEYALEAVRKGNAAVGVRGSDTVVLGVEKKSTPKLQDSRSVRKIA-SLDTHIAL 72
Query: 319 RRFGSDGRLQDLI*KGPSECQNHWFVYNERMSVESCAQALSNL 447
G + LI + ECQ+H + ++VE + ++ L
Sbjct: 73 ACAGLKADARVLINRARVECQSHRLTVEDAVTVEYITRYIAGL 115
>08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323
Length = 319
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/61 (34%), Positives = 34/61 (55%)
Frame = +2
Query: 203 IGICTSEGVVLAVGERITSTLMEPTTIEKIVEVDRHIGCAVSGLMGDFRTLFERAPVNVK 382
+G+ ++ VVL V ++ T L + ++ KI +D HI A +GL D R L RA V +
Sbjct: 104 VGVRGTDTVVLGVEKKSTPKLQDSRSMRKIASLDTHIALACAGLKADARVLINRARVECQ 163
Query: 383 T 385
+
Sbjct: 164 S 164
Score = 33.5 bits (73), Expect = 0.099
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
Frame = +1
Query: 142 EGRLFQVEYAIEAIKLGSTANWHLYFGGSCFGRGRKDNFNFDGTHDH*KDC*SRSTH-WL 318
+G LFQVEYA+EA++ G+ A G +K + K S TH L
Sbjct: 84 DGHLFQVEYALEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSMRKIA-SLDTHIAL 142
Query: 319 RRFGSDGRLQDLI*KGPSECQNHWFVYNERMSVESCAQALSNL 447
G + LI + ECQ+H + ++VE + ++ L
Sbjct: 143 ACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGL 185
>05_05_0306 -
23977543-23977614,23977709-23977799,23978296-23978361,
23978399-23978479,23979130-23979176,23979408-23979492,
23979570-23979656,23979728-23979801,23980083-23980166,
23980259-23980298,23980386-23980489
Length = 276
Score = 40.3 bits (90), Expect = 9e-04
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +2
Query: 203 IGICTSEGVVLAVGERITSTLMEPTTIEKIVEVDRHIGCAVSGLMGDFRTLFERA 367
+GI +G+VL V + +TS ++ + ++ V RH G AV+GL D R + RA
Sbjct: 38 VGIKCKDGIVLGVEKLVTSKMILKGSNRRLHSVHRHSGLAVAGLAADGRQIVSRA 92
>03_03_0187 +
15253000-15253207,15253281-15253370,15254338-15254402,
15254489-15254535,15255195-15255270,15255432-15255499,
15255793-15255862,15256024-15256109,15256328-15256390,
15256472-15256537,15256938-15256986
Length = 295
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/50 (34%), Positives = 32/50 (64%)
Frame = +2
Query: 218 SEGVVLAVGERITSTLMEPTTIEKIVEVDRHIGCAVSGLMGDFRTLFERA 367
+ GVV+A +++ S L++ T+++KI + +IG SG+ DFR L ++
Sbjct: 101 ANGVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKS 150
>02_05_0057 +
25472872-25472912,25473012-25473157,25474008-25474072,
25474182-25474228,25474922-25474997,25475176-25475243,
25475862-25475931,25476178-25476263,25476418-25476480,
25476556-25476621,25476740-25476788
Length = 258
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/50 (34%), Positives = 32/50 (64%)
Frame = +2
Query: 218 SEGVVLAVGERITSTLMEPTTIEKIVEVDRHIGCAVSGLMGDFRTLFERA 367
+ GVV+A +++ S L++ T+++KI + +IG SG+ DFR L ++
Sbjct: 64 ANGVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKS 113
>03_01_0568 -
4192514-4192606,4192694-4192753,4192837-4192932,
4193088-4193170,4193289-4193347,4193463-4193559,
4194151-4194232,4194353-4194447,4194585-4194660
Length = 246
Score = 31.9 bits (69), Expect = 0.30
Identities = 13/55 (23%), Positives = 30/55 (54%)
Frame = +2
Query: 203 IGICTSEGVVLAVGERITSTLMEPTTIEKIVEVDRHIGCAVSGLMGDFRTLFERA 367
IG+ + V + +++ L++ T++ + + ++IG +GL D R+L +A
Sbjct: 40 IGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYIGLLATGLTADARSLVYQA 94
Score = 28.7 bits (61), Expect = 2.8
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +1
Query: 142 EGRLFQVEYAIEAIK 186
EGRL+QVEYA +A+K
Sbjct: 19 EGRLYQVEYAFKAVK 33
>10_01_0063 - 827069-827089,827444-829384,830582-830593
Length = 657
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -1
Query: 82 RGTLDDTTTLLMRVFSQALTYFNLIYI 2
+GTL+D T + +R+FS+AL F +I
Sbjct: 394 KGTLEDNTVVAVRIFSEALEGFEEAFI 420
>01_06_1091 +
34464923-34465026,34465124-34465163,34465245-34465328,
34465457-34465480,34465582-34465655,34465726-34465812,
34465922-34466006,34466215-34466261,34467048-34467113,
34468307-34468397,34468477-34468548
Length = 257
Score = 29.5 bits (63), Expect = 1.6
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Frame = +2
Query: 203 IGICTSEGVVLAVGERITSTLMEPTTIEKIVEVDRHIG--------CAVSGLMGDFRTLF 358
+GI +G+VL V + +TS +M + +I V H G AV+GL D R +
Sbjct: 38 VGIKCKDGIVLGVEKLVTSKMMLEGSNRRIHSVHWHSGLDIILINVMAVAGLAADGRQIV 97
Query: 359 ERA 367
RA
Sbjct: 98 SRA 100
>02_02_0088 -
6655493-6655601,6656057-6656259,6656382-6656594,
6656683-6656792,6656878-6656981,6657076-6657245,
6657337-6657501,6657584-6657702,6657853-6657940,
6658035-6658140,6658235-6658323,6658461-6658604,
6658715-6658807,6658906-6658972,6659116-6659228,
6659306-6659401,6659524-6659724
Length = 729
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 121 GSTHSALEGRLFQVEYAIEAIKLGSTANWHLYFGGSCFGR 240
G H +E F V I+ K GS N+++Y GG+ FGR
Sbjct: 275 GVPHRPVEDLAFAVARFIQ--KGGSFVNYYMYHGGTNFGR 312
>11_06_0766 -
27115441-27115760,27115878-27116025,27116213-27117417,
27117510-27117753,27120181-27120357
Length = 697
Score = 27.9 bits (59), Expect = 4.9
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Frame = +1
Query: 130 HSALEGRLFQVEYAIEAIKLGSTANWH-----LYFGGSCFGRGRK 249
H A EG VEYA AIKL +++ H L+F G+C G+ K
Sbjct: 356 HLASEG----VEYARRAIKLSESSDVHLKSVGLHFLGNCLGKKSK 396
>04_03_0614 + 18038848-18040287
Length = 479
Score = 27.9 bits (59), Expect = 4.9
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 304 STHWLRRFGSDGRLQDLI 357
ST WL GSDG L++LI
Sbjct: 162 STEWLEYLGSDGSLEELI 179
>04_03_0613 + 18034727-18036175
Length = 482
Score = 27.5 bits (58), Expect = 6.5
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 304 STHWLRRFGSDGRLQDLI 357
ST WL GSDG L++L+
Sbjct: 162 STEWLEYLGSDGSLEELV 179
>10_05_0076 +
8872765-8872932,8874727-8874822,8875843-8875955,
8876078-8876144,8876246-8876338,8876496-8876648,
8876761-8876849,8876976-8877081,8877178-8877265,
8877375-8877493,8877626-8877787,8877917-8878113,
8878229-8878317,8878409-8878518,8878622-8878735,
8878990-8879097,8879182-8879784
Length = 824
Score = 27.1 bits (57), Expect = 8.6
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 130 HSALEGRLFQVEYAIEAIKLGSTANWHLYFGGSCFGR 240
H + E F V + K GS N+++Y GG+ FGR
Sbjct: 270 HRSAEDIAFAVAMFFQ--KRGSLQNYYMYHGGTNFGR 304
>01_05_0208 -
19291953-19292552,19293027-19293134,19293231-19293344,
19293464-19293573,19293720-19293808,19293942-19294138,
19294241-19294402,19294501-19294619,19294739-19294826,
19294911-19295016,19295157-19295245,19295351-19295503,
19295631-19295723,19295823-19295889,19296217-19296329,
19296453-19296548,19297963-19298139
Length = 826
Score = 27.1 bits (57), Expect = 8.6
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 130 HSALEGRLFQVEYAIEAIKLGSTANWHLYFGGSCFGR 240
H + E F V + K GS N+++Y GG+ FGR
Sbjct: 273 HRSAEDIAFAVAMFFQ--KRGSLQNYYMYHGGTNFGR 307
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,411,206
Number of Sequences: 37544
Number of extensions: 326292
Number of successful extensions: 825
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1071221400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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