Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0238
(478 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63; Eukary... 208 4e-53
UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105; Eukar... 184 9e-46
UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S riboso... 154 8e-37
UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365... 151 8e-36
UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S riboso... 139 3e-32
UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative, ... 136 3e-31
UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal ... 133 2e-30
UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, who... 121 1e-26
UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S riboso... 117 1e-25
UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=... 101 1e-20
UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein sim... 88 1e-16
UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1; Encepha... 87 2e-16
UniRef50_A7AM97 Cluster: 40S ribosomal protein S17, putative; n=... 73 2e-12
UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Re... 71 1e-11
UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellu... 61 1e-08
UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome sh... 57 2e-07
UniRef50_A1RX28 Cluster: Ribosomal protein S17e; n=1; Thermofilu... 55 7e-07
UniRef50_Q8TUZ3 Cluster: 30S ribosomal protein S17e; n=6; Archae... 55 7e-07
UniRef50_UPI00015531AB Cluster: PREDICTED: similar to OTTHUMP000... 51 1e-05
UniRef50_O26894 Cluster: 30S ribosomal protein S17e; n=2; Methan... 51 2e-05
UniRef50_A2BK33 Cluster: 30S ribosomal protein S17e; n=2; Desulf... 48 8e-05
UniRef50_Q9YA67 Cluster: 30S ribosomal protein S17e; n=2; Thermo... 45 8e-04
UniRef50_UPI0000DD7D3B Cluster: PREDICTED: similar to 40S riboso... 44 0.002
UniRef50_Q8PXL8 Cluster: 30S ribosomal protein S17e; n=8; Euryar... 42 0.007
UniRef50_A7DPB3 Cluster: Ribosomal protein S17e; n=1; Candidatus... 41 0.012
UniRef50_O29351 Cluster: 30S ribosomal protein S17e; n=5; Archae... 41 0.012
UniRef50_Q5V5R5 Cluster: 30S ribosomal protein S17e; n=2; Archae... 40 0.022
UniRef50_Q0W674 Cluster: 30s ribosomal protein S17E; n=2; Archae... 38 0.15
UniRef50_A5DJQ3 Cluster: Putative uncharacterized protein; n=1; ... 36 0.35
UniRef50_A2SST9 Cluster: Ribosomal protein S17E-like protein; n=... 36 0.35
UniRef50_Q9HPX1 Cluster: 30S ribosomal protein S17e; n=5; Euryar... 36 0.35
UniRef50_UPI0000499C4C Cluster: hypothetical protein 289.t00001;... 36 0.61
UniRef50_Q64BW7 Cluster: Ribosomal protein S17E; n=1; uncultured... 36 0.61
UniRef50_A0B7E2 Cluster: Ribosomal protein S17E-like; n=1; Metha... 35 0.81
UniRef50_Q4JAX5 Cluster: 30S ribosomal protein S17e; n=5; Sulfol... 35 1.1
UniRef50_A2F4D0 Cluster: Putative uncharacterized protein; n=1; ... 34 1.4
UniRef50_Q9WY64 Cluster: Flagellar M-ring protein; n=3; Thermoto... 33 2.5
UniRef50_Q64D47 Cluster: Putative uncharacterized protein; n=3; ... 33 3.3
UniRef50_Q23DU0 Cluster: Putative uncharacterized protein; n=1; ... 33 4.3
UniRef50_Q9FRI5 Cluster: Putative uncharacterized protein F4F7.2... 32 5.7
UniRef50_A0RTT2 Cluster: Ribosomal protein S17E; n=1; Cenarchaeu... 32 5.7
UniRef50_UPI0000E48CF7 Cluster: PREDICTED: similar to Brms1l-pro... 32 7.5
UniRef50_Q2J914 Cluster: Cyclopropane-fatty-acyl-phospholipid sy... 32 7.5
UniRef50_Q9EZA9 Cluster: Mob/Pre; n=1; Bacillus coagulans|Rep: M... 32 7.5
UniRef50_A2UAG4 Cluster: Metal dependent phosphohydrolase; n=2; ... 32 7.5
UniRef50_UPI000065E659 Cluster: Probable RNA-binding protein 25 ... 31 10.0
UniRef50_Q10LQ3 Cluster: Expressed protein; n=6; Oryza sativa|Re... 31 10.0
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ... 31 10.0
UniRef50_Q5V546 Cluster: Sensor protein; n=1; Haloarcula marismo... 31 10.0
>UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63;
Eukaryota|Rep: 40S ribosomal protein S17 - Drosophila
melanogaster (Fruit fly)
Length = 131
Score = 208 bits (509), Expect = 4e-53
Identities = 99/115 (86%), Positives = 107/115 (93%)
Frame = +3
Query: 27 QEAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGI 206
++AAK+IIEKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGI
Sbjct: 10 KKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGI 69
Query: 207 SIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPAT 371
SIKLQEEERERRDNYVP VSALE DIIEVD DTK+MLK+LDF+NI GLQLTQP T
Sbjct: 70 SIKLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNT 124
>UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105;
Eukaryota|Rep: 40S ribosomal protein S17 - Homo sapiens
(Human)
Length = 135
Score = 184 bits (448), Expect = 9e-46
Identities = 84/113 (74%), Positives = 102/113 (90%)
Frame = +3
Query: 27 QEAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGI 206
++AA++IIEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGI
Sbjct: 10 KKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGI 69
Query: 207 SIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 365
SIKLQEEERERRDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 70 SIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Rattus norvegicus
Length = 190
Score = 154 bits (374), Expect = 8e-37
Identities = 73/107 (68%), Positives = 85/107 (79%)
Frame = +3
Query: 45 IIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQE 224
IIEKYYTRL DF TNK +CEEIAIIP++ LRNKI + THLM+R++ VRGISIKLQE
Sbjct: 71 IIEKYYTRLGNDFHTNKHVCEEIAIIPSENLRNKITSYVTHLMKRIQRGPVRGISIKLQE 130
Query: 225 EERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 365
EERERRDNYVPE SAL+ +IIEVDPDTK ML + F ++ Q TQP
Sbjct: 131 EERERRDNYVPEGSALDQEIIEVDPDTKKMLNLPGFGRLSNFQDTQP 177
>UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365;
n=3; Homo/Pan/Gorilla group|Rep: Uncharacterized protein
ENSP00000351365 - Homo sapiens (Human)
Length = 135
Score = 151 bits (366), Expect = 8e-36
Identities = 71/116 (61%), Positives = 93/116 (80%)
Frame = +3
Query: 27 QEAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGI 206
++A ++IIEKY TRL DF TNK +CE IAII +K LRNKI G+ HLM+R+R VRGI
Sbjct: 11 KKATQVIIEKYCTRLGNDFYTNKCVCE-IAIILSKKLRNKIVGYVKHLMKRIRKGPVRGI 69
Query: 207 SIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPATQ 374
SIKLQEEERE RDNYVPE+S L+ + +EVDPDTK+ML++LDF +++ LQ+T+P +
Sbjct: 70 SIKLQEEERENRDNYVPEISVLDQETVEVDPDTKEMLELLDFVSLSNLQVTRPTVE 125
>UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Macaca mulatta
Length = 189
Score = 139 bits (336), Expect = 3e-32
Identities = 63/114 (55%), Positives = 88/114 (77%)
Frame = +3
Query: 24 RQEAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRG 203
+ +A ++ ++YYT L +F +NKR CEE II +K L NKI G+ HLM+R++ VRG
Sbjct: 63 KHKATQVFTDQYYTPLGKNFCSNKRACEETTIILSKKLCNKIVGYVMHLMKRIQKDPVRG 122
Query: 204 ISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 365
ISIKLQE+ERER+DNYVPE+SA + + IEVDPDTK+M K+L+F +++ LQ+TQP
Sbjct: 123 ISIKLQEKERERKDNYVPEISATDQETIEVDPDTKEMRKVLNFVSLSNLQVTQP 176
>UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative,
expressed; n=7; Eukaryota|Rep: 40S ribosomal protein
S17-4, putative, expressed - Oryza sativa subsp.
japonica (Rice)
Length = 141
Score = 136 bits (328), Expect = 3e-31
Identities = 62/112 (55%), Positives = 88/112 (78%)
Frame = +3
Query: 27 QEAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGI 206
++ ++ +IEKYY+R+TLDF TNK++ EE++I+P+K LRNK+AGF THLMRR++ VRGI
Sbjct: 10 KKTSRQVIEKYYSRMTLDFHTNKKVLEEVSILPSKRLRNKVAGFTTHLMRRIQRGPVRGI 69
Query: 207 SIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQ 362
S+KLQEEERERR ++VPE SALE + I VD +T +ML L ++ G++ Q
Sbjct: 70 SLKLQEEERERRMDFVPEKSALEVEEIRVDKETMEMLAALGMADLPGVERQQ 121
>UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal
protein S17; n=8; Eutheria|Rep: PREDICTED: similar to
ribosomal protein S17 - Mus musculus
Length = 228
Score = 133 bits (321), Expect = 2e-30
Identities = 61/106 (57%), Positives = 85/106 (80%)
Frame = +3
Query: 48 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 227
+ +Y+TRL DF T+K +CEEI I+P+K L++KIAG+ THL ++++ VRGISIKLQEE
Sbjct: 54 VPEYHTRLGNDFYTDKHVCEEITIVPSKKLQSKIAGYVTHLTKQIQRGPVRGISIKLQEE 113
Query: 228 ERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 365
ERR +Y+PEVSAL+ +I EVDP TK+MLK+LD +++ LQ+TQP
Sbjct: 114 --ERRADYIPEVSALDQEITEVDPATKEMLKLLDLGSLSNLQVTQP 157
>UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_9,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 178
Score = 121 bits (291), Expect = 1e-26
Identities = 55/99 (55%), Positives = 78/99 (78%)
Frame = +3
Query: 24 RQEAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRG 203
+++AAK++IEKYY +LT DF NK+I E+ +P+K LRNKIAGFATHL++R++ V+G
Sbjct: 49 QRKAAKVLIEKYYMKLTSDFHFNKKILSEVGQVPSKKLRNKIAGFATHLLKRIQTGSVKG 108
Query: 204 ISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLK 320
IS+K+QEEERERR +YVPE S+++ D + D D K ML+
Sbjct: 109 ISLKIQEEERERRLDYVPEKSSVDIDNLRGDQDVKRMLE 147
>UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Canis familiaris
Length = 177
Score = 117 bits (282), Expect = 1e-25
Identities = 57/108 (52%), Positives = 80/108 (74%)
Frame = +3
Query: 42 IIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQ 221
+I+EK+Y RL F TNKR+CE+IAI P+K LRN IAG+ HL +R++ V +
Sbjct: 64 VILEKHYPRLGSHFHTNKRVCEDIAISPSKKLRNGIAGYVAHLTKRIQQGPVA------R 117
Query: 222 EEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 365
ER +++ YVPEVSAL+ +IIEVDPDT++MLK+LDF +++ LQ+TQP
Sbjct: 118 GGER-KKETYVPEVSALDQEIIEVDPDTQEMLKLLDFGSLSNLQVTQP 164
>UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=6;
Trypanosomatidae|Rep: 40S ribosomal protein S17,
putative - Leishmania major
Length = 143
Score = 101 bits (241), Expect = 1e-20
Identities = 48/104 (46%), Positives = 71/104 (68%), Gaps = 3/104 (2%)
Frame = +3
Query: 27 QEAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGI 206
+ A++ ++EKYY++L DF NKR+ ++ I +K L+NKIAG+ TH+M+RL VRGI
Sbjct: 10 KRASRQVVEKYYSKLNFDFYQNKRVIMDVTIAESKKLKNKIAGYTTHIMKRLARGPVRGI 69
Query: 207 SIKLQEEERERRDNYVPEVSALEHDI---IEVDPDTKDMLKMLD 329
S+KLQEEERERR ++ P S ++ I + VD T ML+ L+
Sbjct: 70 SLKLQEEERERRMDHAPATSDVDKVIQSGVSVDKKTMQMLQRLE 113
>UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)); n=2;
Eutheria|Rep: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)) - Homo
sapiens (Human)
Length = 121
Score = 87.8 bits (208), Expect = 1e-16
Identities = 45/106 (42%), Positives = 66/106 (62%)
Frame = +3
Query: 27 QEAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGI 206
++ A +I EKYY L DF +K +C+EI I ++ L +KIAG+ THLM+ +R S + +
Sbjct: 10 KKVAWVITEKYYIYLGNDFYMSKYVCKEITITSSRELCSKIAGYVTHLMKEIRGSDSQ-V 68
Query: 207 SIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNIN 344
S R R NYVPE S L+ +I EVD TK+MLK+ F +++
Sbjct: 69 SPSSCRRRRRDRSNYVPEGSVLDQEITEVDAGTKEMLKLPGFGSVS 114
>UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S17
- Encephalitozoon cuniculi
Length = 120
Score = 87.0 bits (206), Expect = 2e-16
Identities = 39/98 (39%), Positives = 64/98 (65%)
Frame = +3
Query: 27 QEAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGI 206
+ AA+ I EKY+ RL FD N + +++A++ +K L+N+IAG+ T L +++ +
Sbjct: 10 KRAARTIAEKYFQRLDSTFDHNLLVVQDVAVVQSKKLKNEIAGYLTSLYKKILKGTYNKV 69
Query: 207 SIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLK 320
IK EEERER++N +P+ S L+ D +EVD T +M+K
Sbjct: 70 YIKSHEEERERKENVIPKESMLDVDCVEVDDVTMEMIK 107
>UniRef50_A7AM97 Cluster: 40S ribosomal protein S17, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S17, putative -
Babesia bovis
Length = 145
Score = 73.3 bits (172), Expect = 2e-12
Identities = 35/60 (58%), Positives = 44/60 (73%)
Frame = +3
Query: 156 FATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFN 335
F HLMRR++ VRGIS+KLQEEERERR ++VPE S ++ +I+VD DT DML L N
Sbjct: 66 FIIHLMRRIQKGPVRGISLKLQEEERERRMDFVPERSEVDVPLIQVDQDTADMLTFLKLN 125
>UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Rep:
RpS17 protein - Guillardia theta (Cryptomonas phi)
Length = 118
Score = 71.3 bits (167), Expect = 1e-11
Identities = 43/108 (39%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Frame = +3
Query: 27 QEAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGI 206
+ +AK I KY+ LT+DF NK C+EIA+I +K LRNKIAG+ THL++ + + I
Sbjct: 10 KRSAKYIFIKYFKHLTIDFQENKFFCDEIALITSKSLRNKIAGYVTHLIKEFFKGKKKKI 69
Query: 207 --SIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNIN 344
+IK E + S E + VD +TK M+K L F N N
Sbjct: 70 YTNIKFDINNIEINNKESEVFSNTELKLNLVDDETKQMIKKL-FPNKN 116
>UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellular
organisms|Rep: 30S ribosomal protein S17e -
Methanococcus jannaschii
Length = 62
Score = 60.9 bits (141), Expect = 1e-08
Identities = 28/53 (52%), Positives = 38/53 (71%)
Frame = +3
Query: 27 QEAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLR 185
+ A +I+KY T DF+TNKR+ EE+A I TK LRN+IAG+ TH MR+L+
Sbjct: 10 KRTAMELIKKYRDLFTTDFETNKRVLEEVAQISTKRLRNRIAGYITHKMRQLQ 62
>UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome
shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
Chromosome 13 SCAF7124, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 372
Score = 56.8 bits (131), Expect = 2e-07
Identities = 23/36 (63%), Positives = 33/36 (91%)
Frame = +3
Query: 258 EVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 365
+VSAL+ ++IEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 326 QVSALDQELIEVDPDTKEMLKLLDFGSLSNLQVTQP 361
>UniRef50_A1RX28 Cluster: Ribosomal protein S17e; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S17e - Thermofilum
pendens (strain Hrk 5)
Length = 95
Score = 55.2 bits (127), Expect = 7e-07
Identities = 29/79 (36%), Positives = 50/79 (63%)
Frame = +3
Query: 27 QEAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGI 206
+ AK+++E+Y T+DF+ NK+ EIA IP++ LRN+IAG+ T L+RR + + R +
Sbjct: 10 KRTAKMLVEQYPDAFTVDFELNKKKLMEIADIPSRQLRNQIAGYITRLVRRKKLIEQR-L 68
Query: 207 SIKLQEEERERRDNYVPEV 263
S++ QE + Y+ +
Sbjct: 69 SMR-QEITMTDEEEYIRRI 86
>UniRef50_Q8TUZ3 Cluster: 30S ribosomal protein S17e; n=6;
Archaea|Rep: 30S ribosomal protein S17e - Methanopyrus
kandleri
Length = 70
Score = 55.2 bits (127), Expect = 7e-07
Identities = 27/56 (48%), Positives = 35/56 (62%)
Frame = +3
Query: 36 AKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRG 203
A+ I+EKY LT DF+ NK++ E +A TK LRN IAG+ THLMR + G
Sbjct: 13 AREIVEKYEEYLTTDFEHNKKVVEIVARPKTKKLRNMIAGYVTHLMRLKERQREEG 68
>UniRef50_UPI00015531AB Cluster: PREDICTED: similar to
OTTHUMP00000016594; n=1; Mus musculus|Rep: PREDICTED:
similar to OTTHUMP00000016594 - Mus musculus
Length = 128
Score = 51.2 bits (117), Expect = 1e-05
Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +3
Query: 27 QEAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRL-RHSQVRG 203
++AA +I EK YT L+ D K +C+EI I P+K L KIAGF LM+++ R+ +++
Sbjct: 27 KKAAWVITEKNYTGLSNDLHNKKDLCKEIIIFPSKKL-YKIAGFVMRLMKQIQRNYKLQE 85
Query: 204 ISIKLQEEERERRDNYVPEVSALEHDIIEVDP 299
+S L ER +D V L+ +++ +P
Sbjct: 86 LSSSL-AAERISKDIVCQNVGFLQINMLMSEP 116
>UniRef50_O26894 Cluster: 30S ribosomal protein S17e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S17e -
Methanobacterium thermoautotrophicum
Length = 62
Score = 50.8 bits (116), Expect = 2e-05
Identities = 23/46 (50%), Positives = 33/46 (71%)
Frame = +3
Query: 36 AKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLM 173
AK +IE + + T DFDTNK++ EE + + TK LRNKIAG+ T ++
Sbjct: 13 AKEMIETHPGKFTDDFDTNKKLVEEFSTVSTKHLRNKIAGYITRII 58
>UniRef50_A2BK33 Cluster: 30S ribosomal protein S17e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S17e -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 103
Score = 48.4 bits (110), Expect = 8e-05
Identities = 28/75 (37%), Positives = 42/75 (56%)
Frame = +3
Query: 15 GLNRQEAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQ 194
GL ++ A K++ E Y T DF+ NKRI ++ P+K LRN+IAG+ T L+R + +
Sbjct: 7 GLVKRTARKLV-EMYPDIFTEDFEHNKRIVSQLIETPSKKLRNQIAGYVTRLIRLYKRTG 65
Query: 195 VRGISIKLQEEERER 239
I+ Q E R
Sbjct: 66 ELQYLIEQQHAEEFR 80
>UniRef50_Q9YA67 Cluster: 30S ribosomal protein S17e; n=2;
Thermoprotei|Rep: 30S ribosomal protein S17e - Aeropyrum
pernix
Length = 74
Score = 45.2 bits (102), Expect = 8e-04
Identities = 20/49 (40%), Positives = 32/49 (65%)
Frame = +3
Query: 27 QEAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLM 173
+ A+ ++EKY T DF+ NKR+ ++ +K LRN+IAG+ THL+
Sbjct: 10 KRTARKLLEKYPDLFTGDFEHNKRVVSQLIEYRSKKLRNQIAGYITHLV 58
>UniRef50_UPI0000DD7D3B Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Homo sapiens|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Homo sapiens
Length = 53
Score = 44.0 bits (99), Expect = 0.002
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +3
Query: 78 DFDTNKRICEEIAIIPTKPLRNKIAGFATH 167
+F NKR+C+EIAIIP+K LRNK AG H
Sbjct: 21 NFHRNKRVCKEIAIIPSKKLRNKKAGLLWH 50
>UniRef50_Q8PXL8 Cluster: 30S ribosomal protein S17e; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S17e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 64
Score = 41.9 bits (94), Expect = 0.007
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = +3
Query: 21 NRQEAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLR 185
N + A +IE Y T DF+TNK + + I +K +RN++AG+ T + R++
Sbjct: 8 NIKRTAFSLIENYGEVFTKDFETNKALVTKYTTIESKIIRNRVAGYVTRKVARMK 62
>UniRef50_A7DPB3 Cluster: Ribosomal protein S17e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S17e - Candidatus Nitrosopumilus maritimus SCM1
Length = 129
Score = 41.1 bits (92), Expect = 0.012
Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Frame = +3
Query: 45 IIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFAT-HLMRRLRHSQVR---GISI 212
++E + ++ DF NK+I E++I+ +K L+N+IAG+ T ++ + +R + + +
Sbjct: 11 VLETHKSKFGEDFADNKKILNEVSIVRSKGLKNEIAGYITNYIKKEIREEKAKKAQAEAS 70
Query: 213 KLQEEERERRDNYVPEVSALEHDIIEVDPDTK 308
K E+E + V E E P+T+
Sbjct: 71 KSLEQEAQVEPEPVEATENTEAPAAEETPETE 102
>UniRef50_O29351 Cluster: 30S ribosomal protein S17e; n=5;
Archaea|Rep: 30S ribosomal protein S17e - Archaeoglobus
fulgidus
Length = 65
Score = 41.1 bits (92), Expect = 0.012
Identities = 18/48 (37%), Positives = 31/48 (64%)
Frame = +3
Query: 36 AKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 179
A+ +++KY T +FD NKR+ E+ I +K +RN++AG+ T + R
Sbjct: 13 ARELLKKYPEVFTGNFDENKRLVAELTNIQSKTVRNRVAGYITRRVNR 60
>UniRef50_Q5V5R5 Cluster: 30S ribosomal protein S17e; n=2;
Archaea|Rep: 30S ribosomal protein S17e - Haloarcula
marismortui (Halobacterium marismortui)
Length = 63
Score = 40.3 bits (90), Expect = 0.022
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = +3
Query: 27 QEAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLM 173
++ +++E+Y DF+ NK + EE+ I +K +RN+IAG+ T M
Sbjct: 9 KKTGTLLMERYPDAFGADFEHNKDVVEELTNIESKGVRNRIAGYVTRKM 57
>UniRef50_Q0W674 Cluster: 30s ribosomal protein S17E; n=2;
Archaea|Rep: 30s ribosomal protein S17E - Uncultured
methanogenic archaeon RC-I
Length = 65
Score = 37.5 bits (83), Expect = 0.15
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +3
Query: 45 IIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLM 173
++ +Y DF NK E++A + TK +RN+IAG+ T M
Sbjct: 16 LLRQYPNEFGSDFTANKAKVEQLASVQTKEVRNRIAGYVTRKM 58
>UniRef50_A5DJQ3 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 606
Score = 36.3 bits (80), Expect = 0.35
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +3
Query: 198 RGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPATQ 374
R I L +ER + + ++ ++ I++ P T ML FNNI+G QP TQ
Sbjct: 112 RQFQIHLARQERIKESQTLYHINRFDNSIVQKPPRTSYMLSPHTFNNISGNTKHQPPTQ 170
>UniRef50_A2SST9 Cluster: Ribosomal protein S17E-like protein; n=4;
Methanomicrobiales|Rep: Ribosomal protein S17E-like
protein - Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z)
Length = 64
Score = 36.3 bits (80), Expect = 0.35
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +3
Query: 45 IIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFAT 164
++E++ +FD NK++ EI I +K +RN++AG+ T
Sbjct: 15 LLEQHGKSFNGNFDDNKKVVAEITTIESKMIRNRVAGYVT 54
>UniRef50_Q9HPX1 Cluster: 30S ribosomal protein S17e; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S17e -
Halobacterium salinarium (Halobacterium halobium)
Length = 59
Score = 36.3 bits (80), Expect = 0.35
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +3
Query: 27 QEAAKIIIEKYYTRLTL-DFDTNKRICEEIAIIPTKPLRNKIAGFATH 167
++ I++E+Y + DF+ NK E+ I +K +RN+IAG+ TH
Sbjct: 9 KKTGNILMERYQDAFSREDFEHNKDAVTELTNIESKNVRNRIAGYITH 56
>UniRef50_UPI0000499C4C Cluster: hypothetical protein 289.t00001;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 289.t00001 - Entamoeba histolytica HM-1:IMSS
Length = 189
Score = 35.5 bits (78), Expect = 0.61
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Frame = +3
Query: 21 NRQEAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVR 200
N+Q +I KY+T + + +++ I ++ I ++RRL+ VR
Sbjct: 22 NQQSVFLALINKYFTITLISPKKRSTVAQQMVTIQNIQYKDDIVEVEEFIIRRLKEINVR 81
Query: 201 GISIKLQEEERERR--DNYVPEVSALEHDIIE 290
IS + + RR +N + E++ L DI++
Sbjct: 82 DISNGVSSKTASRRWENNKIAEINNLLIDILK 113
>UniRef50_Q64BW7 Cluster: Ribosomal protein S17E; n=1; uncultured
archaeon GZfos26F9|Rep: Ribosomal protein S17E -
uncultured archaeon GZfos26F9
Length = 76
Score = 35.5 bits (78), Expect = 0.61
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 54 KYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATH 167
K T DF+ NK++ ++ + +K +RN+IAG+ TH
Sbjct: 18 KEVAECTDDFELNKKLVDKYTNVESKDVRNRIAGYITH 55
>UniRef50_A0B7E2 Cluster: Ribosomal protein S17E-like; n=1;
Methanosaeta thermophila PT|Rep: Ribosomal protein
S17E-like - Methanosaeta thermophila (strain DSM 6194 /
PT) (Methanothrixthermophila (strain DSM 6194 / PT))
Length = 86
Score = 35.1 bits (77), Expect = 0.81
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +3
Query: 36 AKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 179
AK ++ Y T DF+ NK + K +RN+IAG+ T ++ +
Sbjct: 27 AKKLLSTYEGEFTTDFEMNKEKVSAYTNVRNKAIRNRIAGYITRILEQ 74
>UniRef50_Q4JAX5 Cluster: 30S ribosomal protein S17e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S17e -
Sulfolobus acidocaldarius
Length = 82
Score = 34.7 bits (76), Expect = 1.1
Identities = 15/68 (22%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = +3
Query: 27 QEAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHS-QVRG 203
+ A+ + +K+ + + +D NK++ +E + +K ++N+IAG+ T ++ ++ + +
Sbjct: 10 KRVARELYDKFKDQASDKYDDNKKLVDEYVNVSSKKVKNRIAGYLTRYVKISKNKVEAQE 69
Query: 204 ISIKLQEE 227
S +L+E+
Sbjct: 70 ASEELEED 77
>UniRef50_A2F4D0 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 405
Score = 34.3 bits (75), Expect = 1.4
Identities = 21/90 (23%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Frame = +3
Query: 96 RICEEIA-IIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSA- 269
RIC I ++ +P+ + G L +R++ + + +K + EE +++ E S
Sbjct: 104 RICPVIRELLDARPVTARTGGDIRQLEKRIQELEKKNAELKKENEENKKKLRAKSESSQS 163
Query: 270 --LEHDIIEVDPDTKDMLKMLDFNNINGLQ 353
LE + + PD KD+++ + N+ +Q
Sbjct: 164 KDLEEKLFLLLPDEKDIVEASESGNLKAVQ 193
>UniRef50_Q9WY64 Cluster: Flagellar M-ring protein; n=3;
Thermotogaceae|Rep: Flagellar M-ring protein -
Thermotoga maritima
Length = 532
Score = 33.5 bits (73), Expect = 2.5
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +3
Query: 147 IAGFATHLMRRLRHSQVRGISIKLQEEERERR-DNYVPEVSALEHDIIEVDPDTKDMLKM 323
+ GF T ++ L Q+R I + EER R+ + V E+ E EV P+ K++L++
Sbjct: 446 LLGFLTFMLIYLMIVQIRRIRARKLAEERRRKLEEEVKEILQEELKEEEVSPEEKELLEL 505
Query: 324 LD 329
L+
Sbjct: 506 LE 507
>UniRef50_Q64D47 Cluster: Putative uncharacterized protein; n=3;
environmental samples|Rep: Putative uncharacterized
protein - uncultured archaeon GZfos19A5
Length = 122
Score = 33.1 bits (72), Expect = 3.3
Identities = 18/33 (54%), Positives = 20/33 (60%)
Frame = -1
Query: 166 CVANPAILFLRGLVGMIAISSHILLFVSKSSVN 68
CV PAILFL L+ SS LF SKSSV+
Sbjct: 18 CVIYPAILFLTPLLSTFVYSSTNFLFSSKSSVH 50
>UniRef50_Q23DU0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 644
Score = 32.7 bits (71), Expect = 4.3
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 126 TKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERR 242
TKP N+ GF + ++ +Q++ S K++EEERE+R
Sbjct: 206 TKPKVNRPQGFTIGQILKIEENQIQYKSKKIEEEEREQR 244
>UniRef50_Q9FRI5 Cluster: Putative uncharacterized protein F4F7.25;
n=1; Arabidopsis thaliana|Rep: Putative uncharacterized
protein F4F7.25 - Arabidopsis thaliana (Mouse-ear cress)
Length = 790
Score = 32.3 bits (70), Expect = 5.7
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 162 THLMRRLRHSQVRGISIKLQEEERE-RRDNYVPEVSALEHDIIEVDPDTKDML 317
T L+ H + + I LQ+ +E RR YVP+ S + HD +E D +DML
Sbjct: 668 TFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHD-VESDGHKEDML 719
>UniRef50_A0RTT2 Cluster: Ribosomal protein S17E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S17E - Cenarchaeum
symbiosum
Length = 174
Score = 32.3 bits (70), Expect = 5.7
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +3
Query: 45 IIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATH 167
+++ + + L F+ NK+ E ++ I K L+N+IAG+ T+
Sbjct: 62 LLKNHKSEFGLSFEENKKTLERLSTIRYKILKNEIAGYITN 102
>UniRef50_UPI0000E48CF7 Cluster: PREDICTED: similar to Brms1l-prov
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to Brms1l-prov protein -
Strongylocentrotus purpuratus
Length = 318
Score = 31.9 bits (69), Expect = 7.5
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +3
Query: 180 LRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNIN 344
LR ++ I KLQ EE+ R+N+ E S L D+++ D D K D +NI+
Sbjct: 121 LRELRMENIRNKLQSEEKASRENHESEKSLL-RDLMKADLDEKIRRLEEDRHNID 174
>UniRef50_Q2J914 Cluster: Cyclopropane-fatty-acyl-phospholipid
synthase; n=7; Actinomycetales|Rep:
Cyclopropane-fatty-acyl-phospholipid synthase - Frankia
sp. (strain CcI3)
Length = 482
Score = 31.9 bits (69), Expect = 7.5
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +3
Query: 99 ICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEH 278
+C ++ + P + L + G+ + L+ RH VRG+ + + E+ + V E
Sbjct: 203 VCRKLGLRPGERLLDIGCGWGSMLIHAARHHGVRGVGVTISVEQATQARRLVAEADLA-- 260
Query: 279 DIIEV 293
D+IE+
Sbjct: 261 DVIEI 265
>UniRef50_Q9EZA9 Cluster: Mob/Pre; n=1; Bacillus coagulans|Rep:
Mob/Pre - Bacillus coagulans
Length = 474
Score = 31.9 bits (69), Expect = 7.5
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Frame = +3
Query: 183 RHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDML----KMLDF-NNIN 344
+H Q +G I+ +EE ER+ VPE + + +V +TK++ ++ +F NN+N
Sbjct: 164 KHLQEKGFEIQRGKEESERKHLSVPEYKEAKEEAKKVKEETKELASKASQLAEFHNNVN 222
>UniRef50_A2UAG4 Cluster: Metal dependent phosphohydrolase; n=2;
Bacillus|Rep: Metal dependent phosphohydrolase -
Bacillus coagulans 36D1
Length = 216
Score = 31.9 bits (69), Expect = 7.5
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +3
Query: 192 QVRGISIKLQEEERERRDNYVPEVSALEHDIIEV 293
+VRG+++ + E+E E+ D ++ E SAL HDI +V
Sbjct: 32 RVRGLALYIAEKE-EKGDRFIIEASALLHDIPDV 64
>UniRef50_UPI000065E659 Cluster: Probable RNA-binding protein 25
(RNA-binding motif protein 25) (RNA- binding
region-containing protein 7) (Protein S164).; n=1;
Takifugu rubripes|Rep: Probable RNA-binding protein 25
(RNA-binding motif protein 25) (RNA- binding
region-containing protein 7) (Protein S164). - Takifugu
rubripes
Length = 661
Score = 31.5 bits (68), Expect = 10.0
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Frame = +3
Query: 93 KRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERER---RDNYVPEV 263
KR EE+ I + L L RR H R + Q++ERER D+ V E
Sbjct: 346 KREKEELEEIRQRLLDEGHPNPDAELRRREHHRGSRSHRDRRQDQERERPAHTDHEVEEG 405
Query: 264 SALEHDIIEVDPDTKDMLK 320
E+D E +P+TK LK
Sbjct: 406 EEEEYDNDEDNPETKPCLK 424
>UniRef50_Q10LQ3 Cluster: Expressed protein; n=6; Oryza sativa|Rep:
Expressed protein - Oryza sativa subsp. japonica (Rice)
Length = 544
Score = 31.5 bits (68), Expect = 10.0
Identities = 19/60 (31%), Positives = 35/60 (58%)
Frame = +3
Query: 150 AGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLD 329
A +++HL+RR+ + K Q EE ++ + + + LEHD+I + +T D+LK L+
Sbjct: 41 AAWSSHLIRRMFAPP----NPKEQSEESKQPVDIKEQAAQLEHDLIIKEKETLDVLKELE 96
>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 275
Score = 31.5 bits (68), Expect = 10.0
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 440 GGARYPIRPIVSR 478
GGARYPIRPIVSR
Sbjct: 261 GGARYPIRPIVSR 273
>UniRef50_Q5V546 Cluster: Sensor protein; n=1; Haloarcula
marismortui|Rep: Sensor protein - Haloarcula marismortui
(Halobacterium marismortui)
Length = 450
Score = 31.5 bits (68), Expect = 10.0
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = -3
Query: 239 PLTLLFLKFDRDSSHLRVSETP--H*MCGKSSNFIPKRLGRNDSD 111
P T+L F+R+S HL V +T + + SS P+ LGR D D
Sbjct: 127 PETILATMFERNSEHLYVKDTDRHYLLLNDSSYAPPELLGRRDED 171
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 428,813,911
Number of Sequences: 1657284
Number of extensions: 7542056
Number of successful extensions: 19998
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 19550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19985
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26870548160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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