Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0235
         (812 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF515521-1|AAM61888.1|  233|Anopheles gambiae glutathione S-tran...    26   1.6  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    25   2.1  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    25   2.8  
DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor...    24   6.4  
AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450 CY...    24   6.4  
AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    24   6.4  

>AF515521-1|AAM61888.1|  233|Anopheles gambiae glutathione
           S-transferase u1 protein.
          Length = 233

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
 Frame = -1

Query: 557 KAHIIINKPPNMNMTTKSAVLD----LKEPSSSILQYLYVNITLKKKLNPRFPKNRNVVN 390
           KA  +  +   MN   +  VLD        S++ILQYL         L P  PK+R +VN
Sbjct: 35  KAEHLTAEYEKMNPQKEIPVLDDDGFFLSESNAILQYLCEKYAPTSDLYPNDPKDRALVN 94


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = +2

Query: 149 FFNLVISFVFIHIS*SLNCIIWIQ--WRIKPFSKSIC*YHQSPGLTPQLV 292
           +F L+++ +F+ +      I++++  W   PFS S   YH     T Q++
Sbjct: 602 YFALLLTMLFLCVLPVSYAIVFLEPSWHCGPFSNSNRIYHLLTNATEQII 651


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +3

Query: 585 SVYNHDCVCMVTQECFRENELLWINELPG-TLPP 683
           SV+ H    M+  +  R+  L W+ E+PG ++PP
Sbjct: 335 SVFLHYLPAMLLMKRPRKTRLRWMMEMPGMSVPP 368


>DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor 22
           protein.
          Length = 467

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +1

Query: 442 VIFTY-RYCRMLEEGSFRSRTADFVVMFIFGGLLMIIC 552
           +I TY     ++E G+       FV++F    LL IIC
Sbjct: 318 IIATYGSLSEIIEHGATYKEVGLFVIVFYCMSLLFIIC 355


>AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450
           CYP6M1 protein.
          Length = 503

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +3

Query: 354 KFDTEKISTMETVNNIPVLWKPW 422
           KFD E+ S  E     P  W P+
Sbjct: 414 KFDPERFSAEEEAKRHPFAWTPF 436


>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +3

Query: 285 SLCCHNFGCST*FSITFSTILQSKFDTEKISTMETVNNIPV 407
           SL  H F  +  F IT  T  +     EK++ +ET+  +PV
Sbjct: 99  SLATH-FEANKSFKITVETYNKHFSQREKVAKIETMQYLPV 138


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 831,383
Number of Sequences: 2352
Number of extensions: 15938
Number of successful extensions: 27
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86071221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)