Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0233
         (722 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    26   0.27 
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    26   0.27 
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   1.9  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   4.4  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   5.8  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +3

Query: 3   ETLIIHNKSILATIFRVPVIAKILTDF 83
           E L+ HN+  + TIF VP++ KI + F
Sbjct: 226 EILVTHNE--IQTIFSVPLLMKIASQF 250


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +3

Query: 3   ETLIIHNKSILATIFRVPVIAKILTDF 83
           E L+ HN+  + TIF VP++ KI + F
Sbjct: 51  EILVTHNE--IQTIFSVPLLMKIASQF 75


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -2

Query: 622 IHYTILTILNHKWNTL 575
           +  T++T+  HKW+TL
Sbjct: 83  VFVTMMTLKRHKWSTL 98


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 183 IAHPAGFHTVYCGGQ 139
           I  P G+   YCGG+
Sbjct: 289 IVAPLGYDAYYCGGE 303


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 95  QVTLKVCKNFCY 60
           +V   +CKNFC+
Sbjct: 520 KVETSICKNFCF 531


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,256
Number of Sequences: 336
Number of extensions: 3717
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)