Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0232
         (475 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ...    33   2.4  
UniRef50_A4VVU4 Cluster: Type IIA topoisomerase (DNA gyrase/topo...    33   4.3  
UniRef50_Q9HBQ9 Cluster: Putative uncharacterized protein; n=1; ...    33   4.3  
UniRef50_Q6BLZ0 Cluster: Similar to CA1985|IPF9591 Candida albic...    33   4.3  
UniRef50_UPI0000EBC817 Cluster: PREDICTED: hypothetical protein;...    31   9.8  
UniRef50_UPI0000F3315C Cluster: UPI0000F3315C related cluster; n...    31   9.8  

>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 275

 Score = 33.5 bits (73), Expect = 2.4
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +2

Query: 434 RGGARYPIRPIVSR 475
           RGGARYPIRPIVSR
Sbjct: 260 RGGARYPIRPIVSR 273


>UniRef50_A4VVU4 Cluster: Type IIA topoisomerase (DNA gyrase/topo
           II, topoisomerase IV), A subunit; n=3; Streptococcus
           suis|Rep: Type IIA topoisomerase (DNA gyrase/topo II,
           topoisomerase IV), A subunit - Streptococcus suis
           (strain 05ZYH33)
          Length = 843

 Score = 32.7 bits (71), Expect = 4.3
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = -2

Query: 396 VVRRSGHTHFFFWSLLL*NRFTYIGPGYENYGDQNRTS 283
           +V    H HFFF+S L   ++ Y+ P  ENY ++N +S
Sbjct: 97  IVNHGDHKHFFFYSDLKNTKWAYLIP--ENYQEKNHSS 132


>UniRef50_Q9HBQ9 Cluster: Putative uncharacterized protein; n=1;
           Homo sapiens|Rep: Putative uncharacterized protein -
           Homo sapiens (Human)
          Length = 353

 Score = 32.7 bits (71), Expect = 4.3
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +1

Query: 415 KKKKKNSRGGPVPNS 459
           KKKKKNSRGGPVP +
Sbjct: 46  KKKKKNSRGGPVPGN 60


>UniRef50_Q6BLZ0 Cluster: Similar to CA1985|IPF9591 Candida albicans
           IPF9591; n=2; Saccharomycetaceae|Rep: Similar to
           CA1985|IPF9591 Candida albicans IPF9591 - Debaryomyces
           hansenii (Yeast) (Torulaspora hansenii)
          Length = 330

 Score = 32.7 bits (71), Expect = 4.3
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +1

Query: 388 THDWSLLDIKKKKKNSRGGPVPNSP 462
           +H WS LD KK   NS G P+ +SP
Sbjct: 238 SHKWSKLDTKKLVNNSNGQPIKSSP 262


>UniRef50_UPI0000EBC817 Cluster: PREDICTED: hypothetical protein;
           n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
           Bos taurus
          Length = 73

 Score = 31.5 bits (68), Expect = 9.8
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = +1

Query: 343 LKE*TPKKKVCVSAPTHDWSLLDIKKKKKNSRGGPVPNSPYSES 474
           L++ TPK+ + VS PT   +L   +  +  SR  P P SP++ +
Sbjct: 7   LRKVTPKRSLTVSGPTRSANLPPPRSPQSASRAPPRPPSPHASA 50


>UniRef50_UPI0000F3315C Cluster: UPI0000F3315C related cluster; n=1;
           Bos taurus|Rep: UPI0000F3315C UniRef100 entry - Bos
           Taurus
          Length = 107

 Score = 31.5 bits (68), Expect = 9.8
 Identities = 15/32 (46%), Positives = 17/32 (53%)
 Frame = -2

Query: 105 LLIICSVSCCRNIELFLVLFRLIFYIQKLQSC 10
           LL  CS   CR   LF ++F   F I  LQSC
Sbjct: 5   LLSFCSHMSCRFFRLFFLIFVFFFPIPPLQSC 36


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 480,798,706
Number of Sequences: 1657284
Number of extensions: 9003086
Number of successful extensions: 19033
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 18620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19023
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26450695845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)