Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0232
(475 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41021-9|AAQ81276.1| 408|Caenorhabditis elegans Temporarily ass... 29 1.7
U41021-8|AAQ81275.1| 406|Caenorhabditis elegans Temporarily ass... 29 1.7
U39741-2|AAQ81278.1| 279|Caenorhabditis elegans Hypothetical pr... 28 3.0
U39741-1|AAA80429.2| 301|Caenorhabditis elegans Hypothetical pr... 28 3.0
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z83216-3|CAB05674.2| 232|Caenorhabditis elegans Hypothetical pr... 27 6.9
U41279-14|AAK31418.1| 91|Caenorhabditis elegans Insulin relate... 27 6.9
AB032258-1|BAA84470.1| 91|Caenorhabditis elegans ceinsulin-3 p... 27 6.9
U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical pr... 27 9.1
U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical pr... 27 9.1
U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical pr... 27 9.1
>U41021-9|AAQ81276.1| 408|Caenorhabditis elegans Temporarily
assigned gene nameprotein 24, isoform b protein.
Length = 408
Score = 29.1 bits (62), Expect = 1.7
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -2
Query: 465 IGRIGYRAPPRVFFFFFYI 409
IG G+ APP VF FFF++
Sbjct: 348 IGAFGHEAPPLVFKFFFWL 366
>U41021-8|AAQ81275.1| 406|Caenorhabditis elegans Temporarily
assigned gene nameprotein 24, isoform a protein.
Length = 406
Score = 29.1 bits (62), Expect = 1.7
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -2
Query: 465 IGRIGYRAPPRVFFFFFYI 409
IG G+ APP VF FFF++
Sbjct: 346 IGAFGHEAPPLVFKFFFWL 364
>U39741-2|AAQ81278.1| 279|Caenorhabditis elegans Hypothetical
protein F12D9.1b protein.
Length = 279
Score = 28.3 bits (60), Expect = 3.0
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -2
Query: 162 SLIIVFSYIC*SFVLCLVNLLIICSV 85
+L +YIC S +LC+ L+++C V
Sbjct: 205 TLFSSITYICGSIILCIAVLMVVCVV 230
>U39741-1|AAA80429.2| 301|Caenorhabditis elegans Hypothetical
protein F12D9.1a protein.
Length = 301
Score = 28.3 bits (60), Expect = 3.0
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -2
Query: 162 SLIIVFSYIC*SFVLCLVNLLIICSV 85
+L +YIC S +LC+ L+++C V
Sbjct: 227 TLFSSITYICGSIILCIAVLMVVCVV 252
>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical protein
F55H12.3 protein.
Length = 2972
Score = 27.9 bits (59), Expect = 3.9
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -1
Query: 247 MVTRNALSQVTPGCCAGSPPQSLVLIARFSHYCIFIYLLVVCF 119
M+TRN L +VTP S +VL F + I +++VCF
Sbjct: 2778 MITRNCLPEVTP-VPGNSNAIKIVLGVVFGVLLLIIIVVLVCF 2819
>Z83216-3|CAB05674.2| 232|Caenorhabditis elegans Hypothetical
protein C08F11.3 protein.
Length = 232
Score = 27.1 bits (57), Expect = 6.9
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = -2
Query: 138 IC*SFVLCLVNLLIICSVSCCRNIELFLVLFRLIFYIQ 25
IC + L ++ + + +C NI FL++F L+F ++
Sbjct: 146 ICFVWTLIIITIRNLVEWTCDSNIFTFLIIFYLVFILR 183
>U41279-14|AAK31418.1| 91|Caenorhabditis elegans Insulin related
protein 11 protein.
Length = 91
Score = 27.1 bits (57), Expect = 6.9
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 278 HTKCVMRLIAHGHTKCVIAGDAGLLRRQSA 189
HT CV+++ + C GDA +LRR ++
Sbjct: 34 HTACVLKIFKALNVMCNHEGDADVLRRTAS 63
>AB032258-1|BAA84470.1| 91|Caenorhabditis elegans ceinsulin-3
protein.
Length = 91
Score = 27.1 bits (57), Expect = 6.9
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 278 HTKCVMRLIAHGHTKCVIAGDAGLLRRQSA 189
HT CV+++ + C GDA +LRR ++
Sbjct: 34 HTACVLKIFKALNVMCNHEGDADVLRRTAS 63
>U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical
protein F13B9.1c protein.
Length = 1609
Score = 26.6 bits (56), Expect = 9.1
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +1
Query: 355 TPKKKVCVSAPTHDWSLLDIKKKK---KNSRGGPVPNSPYSE 471
TPK KV ++ DW D++ ++ +N R VP++ SE
Sbjct: 275 TPKTKVTPTSSEDDWEKADMEVQRVEDENKRQKAVPSTAVSE 316
>U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical
protein F13B9.1b protein.
Length = 1614
Score = 26.6 bits (56), Expect = 9.1
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +1
Query: 355 TPKKKVCVSAPTHDWSLLDIKKKK---KNSRGGPVPNSPYSE 471
TPK KV ++ DW D++ ++ +N R VP++ SE
Sbjct: 275 TPKTKVTPTSSEDDWEKADMEVQRVEDENKRQKAVPSTAVSE 316
>U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical
protein F13B9.1a protein.
Length = 1632
Score = 26.6 bits (56), Expect = 9.1
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +1
Query: 355 TPKKKVCVSAPTHDWSLLDIKKKK---KNSRGGPVPNSPYSE 471
TPK KV ++ DW D++ ++ +N R VP++ SE
Sbjct: 275 TPKTKVTPTSSEDDWEKADMEVQRVEDENKRQKAVPSTAVSE 316
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,256,977
Number of Sequences: 27780
Number of extensions: 228729
Number of successful extensions: 535
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 535
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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