Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0230
         (681 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4ABA8 Cluster: Long-chain-fatty-acid--CoA ligase; n=1;...    36   1.2  
UniRef50_A5K8K5 Cluster: Putative uncharacterized protein; n=1; ...    33   6.4  

>UniRef50_A4ABA8 Cluster: Long-chain-fatty-acid--CoA ligase; n=1;
           Congregibacter litoralis KT71|Rep:
           Long-chain-fatty-acid--CoA ligase - Congregibacter
           litoralis KT71
          Length = 516

 Score = 35.5 bits (78), Expect = 1.2
 Identities = 27/86 (31%), Positives = 47/86 (54%)
 Frame = +2

Query: 410 SQPTEFLILESSILR*LPSYITNPR*TATVVRNGVHFARSVGRNPME*KIGI*NRFPGVI 589
           ++P E ++  SS+++    Y TNP  TA V R+G H    VG    E  I I +R   +I
Sbjct: 359 NEPGEIVVRGSSVMK---GYYTNPEATAEVSRHGWHHTTDVGVKDEEGYITIVDRIKDMI 415

Query: 590 QAIVVFCVIYKMESLKSILNQISELE 667
             I     IY +E +++++N ++E++
Sbjct: 416 --ISGGFNIYPVE-IENVINGMAEVQ 438


>UniRef50_A5K8K5 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 1889

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 20/61 (32%), Positives = 32/61 (52%)
 Frame = +1

Query: 1   GFIQAYIRHLCSHNLLSHSRFHAVHPTLLKQFE*KFIKLTVSKLVKISNXRIKFTDYILS 180
           GF  +++ H+C  NL     F  +H T+LK+      KL   +  +I N  +  +DYILS
Sbjct: 725 GFNASHVEHVCRENL-----FLPMHVTILKEKNEMKKKLQSIQFQRIPNFFMNKSDYILS 779

Query: 181 Y 183
           +
Sbjct: 780 F 780


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 566,814,485
Number of Sequences: 1657284
Number of extensions: 10092469
Number of successful extensions: 21761
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 21164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21754
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52892566912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)