Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0230
         (681 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   3.1  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   4.0  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   4.0  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   4.0  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   7.1  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +2

Query: 242 DATKLRIDSVSSNIV*YHFFDFRES*I*LKLILWFDIV 355
           + T L+ DS++  +   +FF  R     L  ++WFD V
Sbjct: 161 ELTVLKSDSLAVRLSAANFFGARHGLETLNQLIWFDEV 198


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 82  ELDGLREXGYGREGCDCRDDVY 17
           EL+GLR+    +E CD +   Y
Sbjct: 461 ELNGLRDFQEWKEKCDIKGQPY 482


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 82  ELDGLREXGYGREGCDCRDDVY 17
           EL+GLR+    +E CD +   Y
Sbjct: 468 ELNGLRDFQEWKEKCDIKGQPY 489


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 534 PTLLAKWTPLRTTVAVYLGFV 472
           P     WT  R+ V VYL +V
Sbjct: 145 PLTYCSWTSRRSKVMVYLAWV 165


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +1

Query: 517 FCKKCRQKSNGIENWHLKQ 573
           +  KC   S G+E++  KQ
Sbjct: 168 YSSKCENNSTGVEHFFKKQ 186


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,495
Number of Sequences: 336
Number of extensions: 2786
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)