Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0230
         (681 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92832-1|CAB07370.1|  450|Caenorhabditis elegans Hypothetical pr...    28   5.4  
U23514-1|AAC46543.1|  817|Caenorhabditis elegans Hypothetical pr...    27   9.4  

>Z92832-1|CAB07370.1|  450|Caenorhabditis elegans Hypothetical
           protein F31D4.2 protein.
          Length = 450

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 13/37 (35%), Positives = 24/37 (64%)
 Frame = -2

Query: 545 LDFCLHFLQNGRHYGQLSRFI*DLLYKTVVSGELNFQ 435
           LD+ +  L+NG + G+ SR + + L K + SG++ +Q
Sbjct: 302 LDWTIEQLKNGENIGEESRALGEKLEKRMKSGQIVYQ 338


>U23514-1|AAC46543.1|  817|Caenorhabditis elegans Hypothetical
           protein F48E8.6 protein.
          Length = 817

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -2

Query: 581 QETCFKCQFSIPLDFCLHFLQNGRHY 504
           Q+  + C F +PL F  HF  N  HY
Sbjct: 606 QQAKYFCTFEMPLSFYHHFALNVDHY 631


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,376,026
Number of Sequences: 27780
Number of extensions: 254735
Number of successful extensions: 554
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 554
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)