Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0228
         (788 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   2.7  
AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein ...    25   3.5  
DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     24   6.2  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +3

Query: 492  QTETHYCFTPEIGGAVVPTRADSQEVLPPVKTPDTRT 602
            + ++ Y   P+ G    P  A +Q  LPPV+ P+T T
Sbjct: 1445 EAKSSYQQQPDSGTEQAPREATAQ--LPPVQPPETLT 1479


>AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein S26
           protein.
          Length = 114

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = +3

Query: 462 MYSYNGCPNLQTETHYCFTPEIGGAVVPTRADSQEVLPPVKTPDTRTLFP 611
           +YS    P L  + HYC +  I   VV  R  S+E    ++TP  R+ FP
Sbjct: 57  VYSSYVLPKLYAKLHYCVSCAIHSKVVRNR--SKET-RRIRTPPQRS-FP 102


>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 656 SPPYKWKGKITFIKKRK 606
           S P +W G +T  KKRK
Sbjct: 259 SNPLEWTGNVTVRKKRK 275


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 838,357
Number of Sequences: 2352
Number of extensions: 17679
Number of successful extensions: 43
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82744797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)