Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0228
         (788 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U96781-2|AAB53112.1|  994|Homo sapiens Ca2+ ATPase of fast-twitc...    32   2.7  
U96781-1|AAB53113.1| 1001|Homo sapiens Ca2+ ATPase of fast-twitc...    32   2.7  
BX537784-1|CAD97841.1|  994|Homo sapiens hypothetical protein pr...    32   2.7  
BC037354-1|AAH37354.1|  844|Homo sapiens Similar to ATPase, Ca++...    32   2.7  
BX537389-1|CAD97631.1| 1054|Homo sapiens hypothetical protein pr...    31   6.3  

>U96781-2|AAB53112.1|  994|Homo sapiens Ca2+ ATPase of fast-twitch
           skeletal muscle sacroplasmic reticulum, neonatal iso
           protein.
          Length = 994

 Score = 31.9 bits (69), Expect = 2.7
 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -2

Query: 634 AKSHL*RNGNKVLVSGVFTGGRTSCESARVGTTAPPISG-VKQ*CVSV 494
           AKS     GNK+ V G   G    C   RVGTT  P++G VK+  ++V
Sbjct: 501 AKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPLTGPVKEKIMAV 548


>U96781-1|AAB53113.1| 1001|Homo sapiens Ca2+ ATPase of fast-twitch
           skeletal muscle sacroplasmic reticulum, adult isofor
           protein.
          Length = 1001

 Score = 31.9 bits (69), Expect = 2.7
 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -2

Query: 634 AKSHL*RNGNKVLVSGVFTGGRTSCESARVGTTAPPISG-VKQ*CVSV 494
           AKS     GNK+ V G   G    C   RVGTT  P++G VK+  ++V
Sbjct: 501 AKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPLTGPVKEKIMAV 548


>BX537784-1|CAD97841.1|  994|Homo sapiens hypothetical protein
           protein.
          Length = 994

 Score = 31.9 bits (69), Expect = 2.7
 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -2

Query: 634 AKSHL*RNGNKVLVSGVFTGGRTSCESARVGTTAPPISG-VKQ*CVSV 494
           AKS     GNK+ V G   G    C   RVGTT  P++G VK+  ++V
Sbjct: 501 AKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPLTGPVKEKIMAV 548


>BC037354-1|AAH37354.1|  844|Homo sapiens Similar to ATPase, Ca++
           transporting, cardiac muscle, fast twitch 1 protein.
          Length = 844

 Score = 31.9 bits (69), Expect = 2.7
 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -2

Query: 634 AKSHL*RNGNKVLVSGVFTGGRTSCESARVGTTAPPISG-VKQ*CVSV 494
           AKS     GNK+ V G   G    C   RVGTT  P++G VK+  ++V
Sbjct: 538 AKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPLTGPVKEKIMAV 585


>BX537389-1|CAD97631.1| 1054|Homo sapiens hypothetical protein
           protein.
          Length = 1054

 Score = 30.7 bits (66), Expect = 6.3
 Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -2

Query: 634 AKSHL*RNGNKVLVSGVFTGGRTSCESARVGTTA-PPISGVKQ*CVSV 494
           AKS     GNK+ V G   G    C   RVGTT  PP   VK+  ++V
Sbjct: 561 AKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPPTGPVKEKIMAV 608


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,896,032
Number of Sequences: 237096
Number of extensions: 2559429
Number of successful extensions: 3732
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3732
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)