Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0222
         (720 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      26   0.35 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      26   0.35 
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    25   0.62 
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   2.5  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       23   3.3  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    23   3.3  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    23   3.3  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    22   4.4  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   5.8  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   7.6  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 344 VEKCDVNHHSRLSVYICTERINPNNSY 424
           +EK ++NH+ +L  Y+C       N Y
Sbjct: 320 LEKSNLNHNEQLRKYLCKNEDETKNHY 346


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 344 VEKCDVNHHSRLSVYICTERINPNNSY 424
           +EK ++NH+ +L  Y+C       N Y
Sbjct: 212 LEKSNLNHNEQLRKYLCKNEDETKNHY 238


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 25.0 bits (52), Expect = 0.62
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -1

Query: 228 IVVLFRRKVENIGFILTENL 169
           IV +FR K  NI  +LTE L
Sbjct: 165 IVCIFRGKYRNINLLLTEQL 184


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 6/14 (42%), Positives = 13/14 (92%)
 Frame = -3

Query: 634 ILFVFVNIFYSVVL 593
           ++F+FVN+F+ V++
Sbjct: 97  LIFIFVNVFFWVII 110


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 61  RSVYLRVKIVCLKHQTYFNHYQFR 132
           R  Y R + + L+ + +FNHY  R
Sbjct: 10  RQTYTRFQTLELEKEFHFNHYLTR 33


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 61  RSVYLRVKIVCLKHQTYFNHYQFR 132
           R  Y R + + L+ + +FNHY  R
Sbjct: 161 RQTYTRFQTLELEKEFHFNHYLTR 184


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 61  RSVYLRVKIVCLKHQTYFNHYQFR 132
           R  Y R + + L+ + +FNHY  R
Sbjct: 220 RQTYTRFQTLELEKEFHFNHYLTR 243


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +3

Query: 249 LLLWTSAC*ACVGFPKPFICITFTIVLVF 335
           L+L   A  A + +P+P    TF+ V++F
Sbjct: 11  LVLTIEASDAVLAYPQPSFHQTFSFVVIF 39


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 137 HFSSTYIVTPLRFSVKMKPIFSTLR 211
           H ++TY   PLRF   +  + ST R
Sbjct: 343 HVTTTYPKQPLRFGKILLLVSSTFR 367


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 273 NKLTSTTKEIQIAFTIVVLF 214
           NK TST+KEI +   +++ F
Sbjct: 212 NKNTSTSKEIALNNDVLLFF 231


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,351
Number of Sequences: 336
Number of extensions: 3875
Number of successful extensions: 21
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)