Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0222
(720 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR788268-5|CAI95050.1| 1288|Homo sapiens contactin associated pr... 31 5.5
CR788268-2|CAI95046.1| 1175|Homo sapiens contactin associated pr... 31 5.5
BX664735-4|CAI16326.1| 1288|Homo sapiens contactin associated pr... 31 5.5
BX664735-1|CAI16324.1| 1175|Homo sapiens contactin associated pr... 31 5.5
BX649569-4|CAI12628.1| 1288|Homo sapiens contactin associated pr... 31 5.5
BX649569-1|CAI12626.1| 1175|Homo sapiens contactin associated pr... 31 5.5
BC132737-1|AAI32738.1| 1207|Homo sapiens CNTNAP3 protein protein. 30 9.6
BC022557-1|AAH22557.1| 412|Homo sapiens TMEM22 protein protein. 30 9.6
BC000111-1|AAH00111.1| 390|Homo sapiens TMEM22 protein protein. 30 9.6
AL353729-6|CAH72042.1| 1039|Homo sapiens contactin associated pr... 30 9.6
AL353729-3|CAH72039.1| 1288|Homo sapiens contactin associated pr... 30 9.6
AL162501-4|CAH70490.1| 1039|Homo sapiens contactin associated pr... 30 9.6
AL162501-2|CAH70488.1| 1288|Homo sapiens contactin associated pr... 30 9.6
AF333769-1|AAG52889.2| 1288|Homo sapiens cell recognition molecu... 30 9.6
AB051501-1|BAB21805.2| 1175|Homo sapiens KIAA1714 protein protein. 30 9.6
>CR788268-5|CAI95050.1| 1288|Homo sapiens contactin associated
protein-like 3B protein.
Length = 1288
Score = 30.7 bits (66), Expect = 5.5
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 335 ENEYYCECDAYEGLWKSNTCLTS 267
+++YYC CDA + W S+T + S
Sbjct: 732 DSQYYCNCDAGQNEWTSDTIVLS 754
>CR788268-2|CAI95046.1| 1175|Homo sapiens contactin associated
protein-like 3B protein.
Length = 1175
Score = 30.7 bits (66), Expect = 5.5
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 335 ENEYYCECDAYEGLWKSNTCLTS 267
+++YYC CDA + W S+T + S
Sbjct: 780 DSQYYCNCDAGQNEWTSDTIVLS 802
>BX664735-4|CAI16326.1| 1288|Homo sapiens contactin associated
protein-like 3B protein.
Length = 1288
Score = 30.7 bits (66), Expect = 5.5
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 335 ENEYYCECDAYEGLWKSNTCLTS 267
+++YYC CDA + W S+T + S
Sbjct: 732 DSQYYCNCDAGQNEWTSDTIVLS 754
>BX664735-1|CAI16324.1| 1175|Homo sapiens contactin associated
protein-like 3B protein.
Length = 1175
Score = 30.7 bits (66), Expect = 5.5
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 335 ENEYYCECDAYEGLWKSNTCLTS 267
+++YYC CDA + W S+T + S
Sbjct: 780 DSQYYCNCDAGQNEWTSDTIVLS 802
>BX649569-4|CAI12628.1| 1288|Homo sapiens contactin associated
protein-like 3B protein.
Length = 1288
Score = 30.7 bits (66), Expect = 5.5
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 335 ENEYYCECDAYEGLWKSNTCLTS 267
+++YYC CDA + W S+T + S
Sbjct: 732 DSQYYCNCDAGQNEWTSDTIVLS 754
>BX649569-1|CAI12626.1| 1175|Homo sapiens contactin associated
protein-like 3B protein.
Length = 1175
Score = 30.7 bits (66), Expect = 5.5
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 335 ENEYYCECDAYEGLWKSNTCLTS 267
+++YYC CDA + W S+T + S
Sbjct: 780 DSQYYCNCDAGQNEWTSDTIVLS 802
>BC132737-1|AAI32738.1| 1207|Homo sapiens CNTNAP3 protein protein.
Length = 1207
Score = 29.9 bits (64), Expect = 9.6
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 335 ENEYYCECDAYEGLWKSNTCLTS 267
+++YYC CDA W S+T + S
Sbjct: 731 DSQYYCNCDAGRNEWTSDTIVLS 753
>BC022557-1|AAH22557.1| 412|Homo sapiens TMEM22 protein protein.
Length = 412
Score = 29.9 bits (64), Expect = 9.6
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +1
Query: 46 EFINQRSVY--LRVKIVCLKHQTYFNHYQFRLSLFKYIYCNSIKI 174
E I RSV+ L V +VC + F +RL LF Y CN I I
Sbjct: 135 ELIFIRSVFQVLSVLVVCYYEEAPFGPSGYRLRLFFYGVCNVISI 179
>BC000111-1|AAH00111.1| 390|Homo sapiens TMEM22 protein protein.
Length = 390
Score = 29.9 bits (64), Expect = 9.6
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +1
Query: 46 EFINQRSVY--LRVKIVCLKHQTYFNHYQFRLSLFKYIYCNSIKI 174
E I RSV+ L V +VC + F +RL LF Y CN I I
Sbjct: 113 ELIFIRSVFQVLSVLVVCYYQEAPFGPSGYRLRLFFYGVCNVISI 157
>AL353729-6|CAH72042.1| 1039|Homo sapiens contactin associated
protein-like 3 protein.
Length = 1039
Score = 29.9 bits (64), Expect = 9.6
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 335 ENEYYCECDAYEGLWKSNTCLTS 267
+++YYC CDA W S+T + S
Sbjct: 644 DSQYYCNCDAGRNEWTSDTIVLS 666
>AL353729-3|CAH72039.1| 1288|Homo sapiens contactin associated
protein-like 3 protein.
Length = 1288
Score = 29.9 bits (64), Expect = 9.6
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 335 ENEYYCECDAYEGLWKSNTCLTS 267
+++YYC CDA W S+T + S
Sbjct: 732 DSQYYCNCDAGRNEWTSDTIVLS 754
>AL162501-4|CAH70490.1| 1039|Homo sapiens contactin associated
protein-like 3 protein.
Length = 1039
Score = 29.9 bits (64), Expect = 9.6
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 335 ENEYYCECDAYEGLWKSNTCLTS 267
+++YYC CDA W S+T + S
Sbjct: 644 DSQYYCNCDAGRNEWTSDTIVLS 666
>AL162501-2|CAH70488.1| 1288|Homo sapiens contactin associated
protein-like 3 protein.
Length = 1288
Score = 29.9 bits (64), Expect = 9.6
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 335 ENEYYCECDAYEGLWKSNTCLTS 267
+++YYC CDA W S+T + S
Sbjct: 732 DSQYYCNCDAGRNEWTSDTIVLS 754
>AF333769-1|AAG52889.2| 1288|Homo sapiens cell recognition molecule
CASPR3 protein.
Length = 1288
Score = 29.9 bits (64), Expect = 9.6
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 335 ENEYYCECDAYEGLWKSNTCLTS 267
+++YYC CDA W S+T + S
Sbjct: 732 DSQYYCNCDAGRNEWTSDTIVLS 754
>AB051501-1|BAB21805.2| 1175|Homo sapiens KIAA1714 protein protein.
Length = 1175
Score = 29.9 bits (64), Expect = 9.6
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 335 ENEYYCECDAYEGLWKSNTCLTS 267
+++YYC CDA W S+T + S
Sbjct: 780 DSQYYCNCDAGRNEWTSDTIVLS 802
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,006,323
Number of Sequences: 237096
Number of extensions: 1843608
Number of successful extensions: 2864
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2864
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -