Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0220
(388 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15; Bilater... 174 6e-43
UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71; Euteleo... 83 1e-15
UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6; Metazoa|... 82 4e-15
UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes p... 65 5e-10
UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep: ... 63 2e-09
UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia ... 62 4e-09
UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffith... 57 1e-07
UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistos... 45 4e-04
UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15; Pezizom... 44 8e-04
UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia a... 39 0.038
UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia... 38 0.051
UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=... 38 0.051
UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7... 36 0.21
UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11; Eukar... 36 0.21
UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n... 36 0.27
UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2; Cryptosp... 36 0.27
UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e, puta... 36 0.27
UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17; Eukaryo... 35 0.63
UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2; Sordaria... 34 1.1
UniRef50_A7ET80 Cluster: Putative uncharacterized protein; n=1; ... 34 1.1
UniRef50_P54054 Cluster: 50S ribosomal protein L14e; n=8; Euryar... 34 1.1
UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2; Eukaryot... 33 1.4
UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2; Caenorha... 33 1.4
UniRef50_Q8U2L5 Cluster: 50S ribosomal protein L14e; n=5; Archae... 33 1.9
UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16; Dikar... 33 2.5
UniRef50_UPI000023DB34 Cluster: hypothetical protein FG02414.1; ... 32 3.3
UniRef50_Q4WJD7 Cluster: 60S ribosomal protein L27e; n=6; Pezizo... 32 3.3
UniRef50_A5WAJ3 Cluster: Putative uncharacterized protein; n=1; ... 32 4.4
UniRef50_A0BCG5 Cluster: Chromosome undetermined scaffold_10, wh... 32 4.4
UniRef50_Q5KML3 Cluster: VpsB, putative; n=2; Basidiomycota|Rep:... 32 4.4
UniRef50_Q3E226 Cluster: Ribosomal protein S6; n=2; Chloroflexus... 31 5.8
UniRef50_Q4WIY6 Cluster: Putative uncharacterized protein; n=3; ... 31 5.8
UniRef50_P0C2H7 Cluster: 60S ribosomal protein L27-B; n=39; Euka... 31 5.8
UniRef50_UPI00006CAB39 Cluster: hypothetical protein TTHERM_0078... 31 7.7
>UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15;
Bilateria|Rep: 60S ribosomal protein L6 - Bombyx mori
(Silk moth)
Length = 273
Score = 174 bits (423), Expect = 6e-43
Identities = 85/97 (87%), Positives = 86/97 (88%)
Frame = +3
Query: 96 KAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGR 275
KAKYKFIG LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGR
Sbjct: 50 KAKYKFIGKKNPKPEKPKKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGR 109
Query: 276 PFSKHVRRIRPNLKIGTVCILLAGRHAGKKVVLVGIL 386
PFSKHVRRIRPNLKIGTVCILLAGRHAGK+VVLVGIL
Sbjct: 110 PFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGIL 146
Score = 68.1 bits (159), Expect = 5e-11
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = +2
Query: 2 AVTKKKSTKKPRNYDLGNGVMRFSKSKMFHK 94
A+TKKKSTKKPRNYDLGNGVMRFSKSKMFHK
Sbjct: 19 ALTKKKSTKKPRNYDLGNGVMRFSKSKMFHK 49
>UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71;
Euteleostomi|Rep: 60S ribosomal protein L6 - Homo
sapiens (Human)
Length = 288
Score = 83.4 bits (197), Expect = 1e-15
Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
Frame = +3
Query: 81 RCSTXKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA 260
R + K KY L V K +GG+KNGGTR V L++ +YPT++ R
Sbjct: 65 RKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRK 124
Query: 261 --SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKKVVLV 377
S G +PFS+HVR++R ++ GT+ I+L GRH GK+VV +
Sbjct: 125 LLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
>UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6;
Metazoa|Rep: 60S ribosomal protein L6 - Drosophila
melanogaster (Fruit fly)
Length = 262
Score = 81.8 bits (193), Expect = 4e-15
Identities = 41/74 (55%), Positives = 51/74 (68%)
Frame = +3
Query: 165 VKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLA 344
VK+IGG KNGG RTV LK+ K+ YPT+ ++ FS+H R R NL GTV ILLA
Sbjct: 65 VKKIGGPKNGGERTVFLKKSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLA 124
Query: 345 GRHAGKKVVLVGIL 386
GRH GK+VVL+ +L
Sbjct: 125 GRHQGKRVVLLKVL 138
>UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes
pacificus|Rep: 60S ribosomal protein L6 - Ixodes
pacificus (western blacklegged tick)
Length = 268
Score = 64.9 bits (151), Expect = 5e-10
Identities = 33/75 (44%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Frame = +3
Query: 159 VVVKQIGGEKNGGTRTVPLKRRKSFYPTQE--KIRASSGGRPFSKHVRRIRPNLKIGTVC 332
V VK++ GEKNGG R +PLK+ + YPT++ + + +S +P S+ +R + GTV
Sbjct: 67 VTVKRVKGEKNGGKRVLPLKKERRSYPTEDSPQHKRTSHMKPSSRTRVALRKRITPGTVL 126
Query: 333 ILLAGRHAGKKVVLV 377
ILLAG H GK+VV +
Sbjct: 127 ILLAGPHRGKRVVFL 141
Score = 34.7 bits (76), Expect = 0.63
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +2
Query: 32 PRNYDLGNGVMRFSKSKMFHKXG*IQV 112
P+N+ L GV FS+SKMFHK G +V
Sbjct: 25 PKNHKLPGGVWLFSRSKMFHKRGLFKV 51
>UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 244
Score = 63.3 bits (147), Expect = 2e-09
Identities = 32/70 (45%), Positives = 44/70 (62%)
Frame = +3
Query: 168 KQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAG 347
K IGG+KNGG R VP++R +YPT E +R R + ++R ++ GTV ILLAG
Sbjct: 54 KDIGGDKNGGKRVVPVQRESRYYPT-EDVRRRLANRK-KPGMAKLRSSITPGTVLILLAG 111
Query: 348 RHAGKKVVLV 377
H GK+VV +
Sbjct: 112 AHRGKRVVFL 121
>UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia
franciscana|Rep: 60S ribosomal protein L6 - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 241
Score = 62.1 bits (144), Expect = 4e-09
Identities = 32/76 (42%), Positives = 48/76 (63%)
Frame = +3
Query: 159 VVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCIL 338
V+ K+IGG+KNGGTR V ++ FYP + + +K+ +IR +L+ GT+ IL
Sbjct: 44 VIEKKIGGDKNGGTRLVSTRKPPQFYPINSRQKRFHRRLVNNKNPPKIRKSLQPGTILIL 103
Query: 339 LAGRHAGKKVVLVGIL 386
LAG + GK+VVL+ L
Sbjct: 104 LAGVNRGKRVVLLKAL 119
>UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffithsia
japonica|Rep: 60S ribosomal protein L6 - Griffithsia
japonica (Red alga)
Length = 216
Score = 56.8 bits (131), Expect = 1e-07
Identities = 29/75 (38%), Positives = 44/75 (58%)
Frame = +3
Query: 153 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVC 332
+ ++ K IGG KNGG R VP K+ +YP +K + R ++RP++K GT+
Sbjct: 20 IKMIKKPIGGAKNGGYRLVPEKKGPKWYPADDK-KTPVPSRKNVHKPTKLRPSIKSGTIV 78
Query: 333 ILLAGRHAGKKVVLV 377
ILLAG G +VV++
Sbjct: 79 ILLAGVFRGSRVVVL 93
>UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistosoma
japonicum|Rep: 60S ribosomal protein L6 - Schistosoma
japonicum (Blood fluke)
Length = 238
Score = 45.2 bits (102), Expect = 4e-04
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Frame = +3
Query: 210 PLKRRKSFYPTQE---KIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKKVVLVG 380
P R Y TQ+ K+R + FS HVR+IR +++ GTV ILLAG H GK+V+ +
Sbjct: 55 PKTRFPRSYVTQQGKRKLRLRRA-KCFSNHVRKIRSSIQPGTVLILLAGPHKGKRVIFLK 113
Query: 381 IL 386
L
Sbjct: 114 AL 115
>UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15;
Pezizomycotina|Rep: 60S ribosomal protein L6 -
Coccidioides immitis
Length = 206
Score = 44.4 bits (100), Expect = 8e-04
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Frame = +3
Query: 156 TVVVKQIGGEKN--GGTRTVPLKRRKS--FYPTQEKIRASSGGRPFSKHVRRIRPNLKIG 323
T+ K +G K G R +P +K+ +YP ++ + + + H ++RP+L+ G
Sbjct: 4 TLDSKSVGQTKKFGKGERVIPHPSQKAQKWYPADDEPQPKKARK--TAHPTKLRPSLQPG 61
Query: 324 TVCILLAGRHAGKKVVLV 377
T+ ILLAGR GK+V+L+
Sbjct: 62 TILILLAGRFRGKRVILL 79
>UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia
asiatica|Rep: 60S ribosomal protein L6 - Taenia asiatica
(Asian tapeworm)
Length = 212
Score = 38.7 bits (86), Expect = 0.038
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = +3
Query: 279 FSKHVRRIRPNLKIGTVCILLAGRHAGKKVVLV 377
F+ H RRIR ++ G V ILLAGRH K+VV +
Sbjct: 86 FADHRRRIRKSITPGKVLILLAGRHRAKRVVFL 118
>UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L27 -
Giardia lamblia ATCC 50803
Length = 135
Score = 38.3 bits (85), Expect = 0.051
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = +3
Query: 303 RPNLKIGTVCILLAGRHAGKKVVLVGIL 386
+P +K G VCI+L GRHAGKK V+V L
Sbjct: 3 QPIIKPGLVCIVLQGRHAGKKAVIVEAL 30
>UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L6e, putative -
Theileria parva
Length = 212
Score = 38.3 bits (85), Expect = 0.051
Identities = 24/60 (40%), Positives = 35/60 (58%)
Frame = +3
Query: 207 VPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKKVVLVGIL 386
V L RRK+ K + GR ++ V ++R +LK G V ILL G + GK+VVL+ +L
Sbjct: 12 VKLNRRKTVVTRLGKTKVV--GRKYAS-VPKVRESLKPGAVLILLTGSYKGKRVVLLKVL 68
>UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 151
Score = 36.3 bits (80), Expect = 0.21
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +3
Query: 303 RPNLKIGTVCILLAGRHAGKKVVLV 377
RP+LK+GTV I++ G H GK+ V+V
Sbjct: 53 RPSLKVGTVVIVVGGEHQGKRAVVV 77
>UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11;
Eukaryota|Rep: 60S ribosomal protein L6-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 233
Score = 36.3 bits (80), Expect = 0.21
Identities = 19/56 (33%), Positives = 34/56 (60%)
Frame = +3
Query: 210 PLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKKVVLV 377
P+++ FYP ++ ++ R +K + +R ++ GTV I+LAGR GK+VV +
Sbjct: 57 PVEKPPKFYPAED-VKKPLPNRRTAKPAK-LRASITPGTVLIILAGRFKGKRVVFL 110
>UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC20AA UniRef100 entry -
Rattus norvegicus
Length = 261
Score = 35.9 bits (79), Expect = 0.27
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = +3
Query: 153 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVC 332
+ V+K + G+KNGGT V L++ K + + + + S P KH + + N TV
Sbjct: 86 VATVIKTVSGDKNGGTGVVKLQKMKMYLGSCKAMAKS----PAFKHEKAV-CNSTPETVL 140
Query: 333 ILLAGRH 353
I++ G+H
Sbjct: 141 IIITGQH 147
>UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L6 -
Cryptosporidium hominis
Length = 184
Score = 35.9 bits (79), Expect = 0.27
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = +3
Query: 255 RASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKKVVLVGIL 386
R S R S ++R +L+ G VCILLAG + GK+VV++ L
Sbjct: 20 RKYSSRRKASVVAPKLRSSLQPGVVCILLAGPYKGKRVVMLKAL 63
>UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L6e, putative - Plasmodium chabaudi
Length = 241
Score = 35.9 bits (79), Expect = 0.27
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Frame = +3
Query: 162 VVKQIGGEKNGGTRTVPLKRRKSFYPTQEK--IRASSGGRPFS---KHV--RRIRPNLKI 320
VV G +KN V ++K P + K I GR + K V R++R ++++
Sbjct: 17 VVPATGDKKNALKHYVIKGQKKILTPVRAKKTISKKHYGRKLASKKKFVVQRKMRSSIQV 76
Query: 321 GTVCILLAGRHAGKKVVLVGIL 386
G V I+L G+H GK+ ++ +L
Sbjct: 77 GKVAIILTGKHMGKRCIIAKVL 98
>UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17;
Eukaryota|Rep: 60S ribosomal protein L6 - Oryza sativa
(Rice)
Length = 222
Score = 34.7 bits (76), Expect = 0.63
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 231 FYPTQE-KIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKKVVLV 377
FYP + K R S +P + ++R ++ GTV ILLAGR GK+VV +
Sbjct: 53 FYPADDVKPRQPSTRKP---NPTKLRSSITPGTVLILLAGRFMGKRVVFL 99
>UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2;
Sordariaceae|Rep: 60S ribosomal protein L6 - Neurospora
crassa
Length = 207
Score = 33.9 bits (74), Expect = 1.1
Identities = 20/40 (50%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +3
Query: 273 RPFSKHVRRIRPNLKI--GTVCILLAGRHAGKKVVLVGIL 386
RP K +R P + GTV ILLAGR GK+VVL+ L
Sbjct: 24 RPVRKTIRPWSPRSTLVPGTVLILLAGRFRGKRVVLLKAL 63
>UniRef50_A7ET80 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 752
Score = 33.9 bits (74), Expect = 1.1
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +3
Query: 186 KNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLK 317
K R LK SF P + + ASS GRP K +R+R LK
Sbjct: 128 KEDHNREEELKAMVSFMPHRPAVDASSSGRPMKKDSKRMRNGLK 171
>UniRef50_P54054 Cluster: 50S ribosomal protein L14e; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L14e -
Methanococcus jannaschii
Length = 80
Score = 33.9 bits (74), Expect = 1.1
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +3
Query: 306 PNLKIGTVCILLAGRHAGKKVVLVGIL 386
P +++G VCI AGR AGK V+V IL
Sbjct: 2 PAIEVGRVCIKTAGREAGKVCVIVDIL 28
>UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2;
Eukaryota|Rep: 60S ribosomal protein L6 - Dictyostelium
discoideum AX4
Length = 236
Score = 33.5 bits (73), Expect = 1.4
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = +3
Query: 195 GTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKKVV 371
G R + K K +IR+++ + K +R ++ GTV I+LAGR AGK+VV
Sbjct: 54 GKRVIAAKASKFAPSIPAEIRSTAAKKVQQKVA--LRKSITPGTVLIILAGRFAGKRVV 110
>UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2;
Caenorhabditis|Rep: 60S ribosomal protein L6 -
Caenorhabditis elegans
Length = 217
Score = 33.5 bits (73), Expect = 1.4
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +3
Query: 300 IRPNLKIGTVCILLAGRHAGKKVVLV 377
+R L GTV I+LAGRH GK+VV +
Sbjct: 67 LRKTLTPGTVLIVLAGRHKGKRVVFL 92
>UniRef50_Q8U2L5 Cluster: 50S ribosomal protein L14e; n=5;
Archaea|Rep: 50S ribosomal protein L14e - Pyrococcus
furiosus
Length = 83
Score = 33.1 bits (72), Expect = 1.9
Identities = 12/27 (44%), Positives = 21/27 (77%)
Frame = +3
Query: 306 PNLKIGTVCILLAGRHAGKKVVLVGIL 386
P + +G + +++AGR AG+KVV+V I+
Sbjct: 2 PAIDVGRIAVVIAGRRAGQKVVVVDII 28
>UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16;
Dikarya|Rep: 60S ribosomal protein L6-A - Saccharomyces
cerevisiae (Baker's yeast)
Length = 176
Score = 32.7 bits (71), Expect = 2.5
Identities = 19/52 (36%), Positives = 33/52 (63%)
Frame = +3
Query: 216 KRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKKVV 371
++ +YP+++ + A R ++ +++R +L GTV ILLAGR GK+VV
Sbjct: 4 QKAPKWYPSED-VAALKKTRKAARP-QKLRASLVPGTVLILLAGRFRGKRVV 53
>UniRef50_UPI000023DB34 Cluster: hypothetical protein FG02414.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG02414.1 - Gibberella zeae PH-1
Length = 607
Score = 32.3 bits (70), Expect = 3.3
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Frame = +3
Query: 213 LKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCI--LLAGRHAGKKVVLVGIL 386
L+ R +F P+Q KI + F++HV R+R NL+I I L+A + G KV+ GIL
Sbjct: 431 LESRDAF-PSQIKIPCKAELASFTRHVERVRKNLEIRVTQIESLIAWLNEG-KVLFDGIL 488
>UniRef50_Q4WJD7 Cluster: 60S ribosomal protein L27e; n=6;
Pezizomycotina|Rep: 60S ribosomal protein L27e -
Aspergillus fumigatus (Sartorya fumigata)
Length = 186
Score = 32.3 bits (70), Expect = 3.3
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 312 LKIGTVCILLAGRHAGKKVVLV 377
+K+G V I+ GR+AGKKVV+V
Sbjct: 55 MKVGRVAIITRGRYAGKKVVIV 76
>UniRef50_A5WAJ3 Cluster: Putative uncharacterized protein; n=1;
Pseudomonas putida F1|Rep: Putative uncharacterized
protein - Pseudomonas putida F1
Length = 572
Score = 31.9 bits (69), Expect = 4.4
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 294 RRIRPNLKIGTVCILLAGRHAGKKVVLVGI 383
R +R + +GTV +L+ G +AGK VL GI
Sbjct: 13 RVVRAEINLGTVNVLVGGNNAGKSSVLQGI 42
>UniRef50_A0BCG5 Cluster: Chromosome undetermined scaffold_10, whole
genome shotgun sequence; n=8; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_10,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1051
Score = 31.9 bits (69), Expect = 4.4
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 312 LKIGTVCILLAGRHAGKKVVLV 377
LK G + +LLAGR+AGKK +L+
Sbjct: 904 LKPGRLIVLLAGRYAGKKAILI 925
>UniRef50_Q5KML3 Cluster: VpsB, putative; n=2; Basidiomycota|Rep:
VpsB, putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 686
Score = 31.9 bits (69), Expect = 4.4
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -1
Query: 385 RIPTSTTFLPACLPARRMQTVPIFRLGRILRTCLLNGRPPDEARI 251
R+P+ A L A R Q P ++ +++ T + NG PP+ AR+
Sbjct: 397 RVPSPNKLRLAILYALRYQKSPSAQIPQVVSTLISNGVPPERARL 441
>UniRef50_Q3E226 Cluster: Ribosomal protein S6; n=2;
Chloroflexus|Rep: Ribosomal protein S6 - Chloroflexus
aurantiacus J-10-fl
Length = 145
Score = 31.5 bits (68), Expect = 5.8
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +3
Query: 165 VKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSK 287
V+Q+GG+ N +++ P RRK YP +E + + R F++
Sbjct: 45 VEQLGGKINTVSQSSPWGRRKLAYPIREYVTGEASRRKFTE 85
>UniRef50_Q4WIY6 Cluster: Putative uncharacterized protein; n=3;
Trichocomaceae|Rep: Putative uncharacterized protein -
Aspergillus fumigatus (Sartorya fumigata)
Length = 406
Score = 31.5 bits (68), Expect = 5.8
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = -3
Query: 386 QNS--NKYNLLACMSTSEENANSSYLQVGSDPAYMLAEWTATR*STDFLLSGVEGLPTFE 213
QNS +++ LLAC + S +++ ++V DP+ L W+ R ++D L G+ +P +
Sbjct: 294 QNSREDRWRLLACNAISSKSSFMDTVRVVRDPSPRL--WSVERFTSDDTLQGLRAMPAID 351
>UniRef50_P0C2H7 Cluster: 60S ribosomal protein L27-B; n=39;
Eukaryota|Rep: 60S ribosomal protein L27-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 136
Score = 31.5 bits (68), Expect = 5.8
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 312 LKIGTVCILLAGRHAGKKVVLV 377
LK G V +++ GR+AGKKVV+V
Sbjct: 5 LKAGKVAVVVRGRYAGKKVVIV 26
>UniRef50_UPI00006CAB39 Cluster: hypothetical protein
TTHERM_00780960; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00780960 - Tetrahymena
thermophila SB210
Length = 128
Score = 31.1 bits (67), Expect = 7.7
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = +3
Query: 312 LKIGTVCILLAGRHAGKKVVLV 377
LK G V ILL GR AGKK V+V
Sbjct: 20 LKYGRVVILLQGRFAGKKAVIV 41
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 382,159,768
Number of Sequences: 1657284
Number of extensions: 6958987
Number of successful extensions: 17319
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 16977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17312
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 15718494179
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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