Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0220
(388 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6 prot... 83 2e-16
S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140 pro... 83 2e-16
D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein TAXRE... 83 2e-16
BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6 pr... 83 2e-16
BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6 pr... 83 2e-16
BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6 pr... 83 2e-16
BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6 pr... 83 2e-16
BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6 pr... 83 2e-16
BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6 pr... 83 2e-16
BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6 pr... 83 2e-16
BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6 pr... 83 2e-16
AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6 pr... 83 2e-16
AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein TAX... 77 3e-14
L19527-1|AAA19815.1| 136|Homo sapiens ribosomal protein L27 pro... 28 9.1
L05094-1|AAC15857.1| 136|Homo sapiens ribosomal protein L27 pro... 28 9.1
BC098560-1|AAH98560.1| 136|Homo sapiens ribosomal protein L27 p... 28 9.1
BC010026-1|AAH10026.1| 136|Homo sapiens ribosomal protein L27 p... 28 9.1
BC007273-1|AAH07273.1| 136|Homo sapiens ribosomal protein L27 p... 28 9.1
BC002588-1|AAH02588.1| 136|Homo sapiens ribosomal protein L27 p... 28 9.1
BC001700-1|AAH01700.1| 136|Homo sapiens ribosomal protein L27 p... 28 9.1
AB061851-1|BAB79492.1| 136|Homo sapiens ribosomal protein L27 p... 28 9.1
>X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 83.4 bits (197), Expect = 2e-16
Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
Frame = +3
Query: 81 RCSTXKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA 260
R + K KY L V K +GG+KNGGTR V L++ +YPT++ R
Sbjct: 65 RKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRK 124
Query: 261 --SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKKVVLV 377
S G +PFS+HVR++R ++ GT+ I+L GRH GK+VV +
Sbjct: 125 LLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
>S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140
product protein.
Length = 207
Score = 83.4 bits (197), Expect = 2e-16
Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
Frame = +3
Query: 81 RCSTXKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA 260
R + K KY L V K +GG+KNGGTR V L++ +YPT++ R
Sbjct: 4 RKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRK 63
Query: 261 --SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKKVVLV 377
S G +PFS+HVR++R ++ GT+ I+L GRH GK+VV +
Sbjct: 64 LLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 104
>D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 288
Score = 83.4 bits (197), Expect = 2e-16
Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
Frame = +3
Query: 81 RCSTXKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA 260
R + K KY L V K +GG+KNGGTR V L++ +YPT++ R
Sbjct: 65 RKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRK 124
Query: 261 --SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKKVVLV 377
S G +PFS+HVR++R ++ GT+ I+L GRH GK+VV +
Sbjct: 125 LLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
>BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 83.4 bits (197), Expect = 2e-16
Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
Frame = +3
Query: 81 RCSTXKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA 260
R + K KY L V K +GG+KNGGTR V L++ +YPT++ R
Sbjct: 65 RKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRK 124
Query: 261 --SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKKVVLV 377
S G +PFS+HVR++R ++ GT+ I+L GRH GK+VV +
Sbjct: 125 LLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
>BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 83.4 bits (197), Expect = 2e-16
Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
Frame = +3
Query: 81 RCSTXKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA 260
R + K KY L V K +GG+KNGGTR V L++ +YPT++ R
Sbjct: 65 RKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRK 124
Query: 261 --SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKKVVLV 377
S G +PFS+HVR++R ++ GT+ I+L GRH GK+VV +
Sbjct: 125 LLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
>BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 83.4 bits (197), Expect = 2e-16
Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
Frame = +3
Query: 81 RCSTXKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA 260
R + K KY L V K +GG+KNGGTR V L++ +YPT++ R
Sbjct: 65 RKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRK 124
Query: 261 --SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKKVVLV 377
S G +PFS+HVR++R ++ GT+ I+L GRH GK+VV +
Sbjct: 125 LLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
>BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 83.4 bits (197), Expect = 2e-16
Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
Frame = +3
Query: 81 RCSTXKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA 260
R + K KY L V K +GG+KNGGTR V L++ +YPT++ R
Sbjct: 65 RKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRK 124
Query: 261 --SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKKVVLV 377
S G +PFS+HVR++R ++ GT+ I+L GRH GK+VV +
Sbjct: 125 LLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
>BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 83.4 bits (197), Expect = 2e-16
Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
Frame = +3
Query: 81 RCSTXKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA 260
R + K KY L V K +GG+KNGGTR V L++ +YPT++ R
Sbjct: 65 RKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRK 124
Query: 261 --SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKKVVLV 377
S G +PFS+HVR++R ++ GT+ I+L GRH GK+VV +
Sbjct: 125 LLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
>BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 83.4 bits (197), Expect = 2e-16
Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
Frame = +3
Query: 81 RCSTXKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA 260
R + K KY L V K +GG+KNGGTR V L++ +YPT++ R
Sbjct: 65 RKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRK 124
Query: 261 --SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKKVVLV 377
S G +PFS+HVR++R ++ GT+ I+L GRH GK+VV +
Sbjct: 125 LLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
>BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 83.4 bits (197), Expect = 2e-16
Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
Frame = +3
Query: 81 RCSTXKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA 260
R + K KY L V K +GG+KNGGTR V L++ +YPT++ R
Sbjct: 65 RKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRK 124
Query: 261 --SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKKVVLV 377
S G +PFS+HVR++R ++ GT+ I+L GRH GK+VV +
Sbjct: 125 LLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
>BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 83.4 bits (197), Expect = 2e-16
Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
Frame = +3
Query: 81 RCSTXKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA 260
R + K KY L V K +GG+KNGGTR V L++ +YPT++ R
Sbjct: 65 RKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRK 124
Query: 261 --SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKKVVLV 377
S G +PFS+HVR++R ++ GT+ I+L GRH GK+VV +
Sbjct: 125 LLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
>AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 83.4 bits (197), Expect = 2e-16
Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
Frame = +3
Query: 81 RCSTXKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA 260
R + K KY L V K +GG+KNGGTR V L++ +YPT++ R
Sbjct: 65 RKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRK 124
Query: 261 --SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKKVVLV 377
S G +PFS+HVR++R ++ GT+ I+L GRH GK+VV +
Sbjct: 125 LLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
>AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 289
Score = 76.6 bits (180), Expect = 3e-14
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Frame = +3
Query: 81 RCSTXKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA 260
R + K KY L V K +GG+KNGGTR V L++ +YPT++ R
Sbjct: 65 RKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRK 124
Query: 261 --SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKKVVL 374
S G +PFS+HVR++R ++ GT+ I+L GR GK V+
Sbjct: 125 LLSHGKKPFSQHVRKLRASITPGTILIILTGRRRGKNWVV 164
>L19527-1|AAA19815.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 28.3 bits (60), Expect = 9.1
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +3
Query: 312 LKIGTVCILLAGRHAGKKVVLV 377
+K G V ++LAGR++G+K V+V
Sbjct: 5 MKPGKVVLVLAGRYSGRKAVIV 26
>L05094-1|AAC15857.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 28.3 bits (60), Expect = 9.1
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +3
Query: 312 LKIGTVCILLAGRHAGKKVVLV 377
+K G V ++LAGR++G+K V+V
Sbjct: 5 MKPGKVVLVLAGRYSGRKAVIV 26
>BC098560-1|AAH98560.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 28.3 bits (60), Expect = 9.1
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +3
Query: 312 LKIGTVCILLAGRHAGKKVVLV 377
+K G V ++LAGR++G+K V+V
Sbjct: 5 MKPGKVVLVLAGRYSGRKAVIV 26
>BC010026-1|AAH10026.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 28.3 bits (60), Expect = 9.1
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +3
Query: 312 LKIGTVCILLAGRHAGKKVVLV 377
+K G V ++LAGR++G+K V+V
Sbjct: 5 MKPGKVVLVLAGRYSGRKAVIV 26
>BC007273-1|AAH07273.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 28.3 bits (60), Expect = 9.1
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +3
Query: 312 LKIGTVCILLAGRHAGKKVVLV 377
+K G V ++LAGR++G+K V+V
Sbjct: 5 MKPGKVVLVLAGRYSGRKAVIV 26
>BC002588-1|AAH02588.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 28.3 bits (60), Expect = 9.1
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +3
Query: 312 LKIGTVCILLAGRHAGKKVVLV 377
+K G V ++LAGR++G+K V+V
Sbjct: 5 MKPGKVVLVLAGRYSGRKAVIV 26
>BC001700-1|AAH01700.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 28.3 bits (60), Expect = 9.1
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +3
Query: 312 LKIGTVCILLAGRHAGKKVVLV 377
+K G V ++LAGR++G+K V+V
Sbjct: 5 MKPGKVVLVLAGRYSGRKAVIV 26
>AB061851-1|BAB79492.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 28.3 bits (60), Expect = 9.1
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +3
Query: 312 LKIGTVCILLAGRHAGKKVVLV 377
+K G V ++LAGR++G+K V+V
Sbjct: 5 MKPGKVVLVLAGRYSGRKAVIV 26
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,556,247
Number of Sequences: 237096
Number of extensions: 1078615
Number of successful extensions: 2064
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2051
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2641190740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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