Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0220
         (388 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p pro...    82   3e-16
AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-P...    82   3e-16
AE014297-4763|AAF57166.1|  243|Drosophila melanogaster CG11522-P...    62   2e-10
AY070827-1|AAL48449.1|  135|Drosophila melanogaster AT27980p pro...    29   2.1  
AE014297-3837|AAF56495.1|  135|Drosophila melanogaster CG4759-PA...    29   2.1  

>AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p
           protein.
          Length = 262

 Score = 81.8 bits (193), Expect = 3e-16
 Identities = 41/74 (55%), Positives = 51/74 (68%)
 Frame = +3

Query: 165 VKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLA 344
           VK+IGG KNGG RTV LK+ K+ YPT+  ++       FS+H R  R NL  GTV ILLA
Sbjct: 65  VKKIGGPKNGGERTVFLKKSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLA 124

Query: 345 GRHAGKKVVLVGIL 386
           GRH GK+VVL+ +L
Sbjct: 125 GRHQGKRVVLLKVL 138


>AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-PB,
           isoform B protein.
          Length = 262

 Score = 81.8 bits (193), Expect = 3e-16
 Identities = 41/74 (55%), Positives = 51/74 (68%)
 Frame = +3

Query: 165 VKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLA 344
           VK+IGG KNGG RTV LK+ K+ YPT+  ++       FS+H R  R NL  GTV ILLA
Sbjct: 65  VKKIGGPKNGGERTVFLKKSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLA 124

Query: 345 GRHAGKKVVLVGIL 386
           GRH GK+VVL+ +L
Sbjct: 125 GRHQGKRVVLLKVL 138


>AE014297-4763|AAF57166.1|  243|Drosophila melanogaster CG11522-PA,
           isoform A protein.
          Length = 243

 Score = 62.5 bits (145), Expect = 2e-10
 Identities = 30/60 (50%), Positives = 40/60 (66%)
 Frame = +3

Query: 207 VPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKKVVLVGIL 386
           VP+K+ K+ YPT+  ++       FS+H R  R NL  GTV ILLAGRH GK+VVL+ +L
Sbjct: 60  VPIKKSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVL 119


>AY070827-1|AAL48449.1|  135|Drosophila melanogaster AT27980p
           protein.
          Length = 135

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 11/26 (42%), Positives = 20/26 (76%)
 Frame = +3

Query: 300 IRPNLKIGTVCILLAGRHAGKKVVLV 377
           +R  +K G + I+L+GR+AG+K ++V
Sbjct: 1   MRKIMKQGKIVIVLSGRYAGRKAIIV 26


>AE014297-3837|AAF56495.1|  135|Drosophila melanogaster CG4759-PA
           protein.
          Length = 135

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 11/26 (42%), Positives = 20/26 (76%)
 Frame = +3

Query: 300 IRPNLKIGTVCILLAGRHAGKKVVLV 377
           +R  +K G + I+L+GR+AG+K ++V
Sbjct: 1   MRKIMKQGKIVIVLSGRYAGRKAIIV 26


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,448,106
Number of Sequences: 53049
Number of extensions: 342387
Number of successful extensions: 691
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1066083345
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)