Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0206
(457 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 36 2e-04
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 31 0.004
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 31 0.004
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 24 0.68
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 23 1.2
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 23 2.1
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 21 4.8
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 8.4
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 21 8.4
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 21 8.4
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 35.9 bits (79), Expect = 2e-04
Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 4/113 (3%)
Frame = +2
Query: 119 SPSRQRIIPCTPPGELEIWYPPIVRVEPKNITVIEGSKLLLKCEYESNPSSLSAVFWFRD 298
S ++ R++ P G + +P + + ++ + L L C + P + + F +
Sbjct: 194 SATKGRLVITEPVGSVRPKFPSMDNIN--GLSTESKADLPLLCPAQGFPVPVHRWYKFIE 251
Query: 299 G----ERVNVNDTAHYQGGTTDQHSLIIMNARGVDMGNYTCLLTNSVGNGTSE 445
G + V +N+ GT LII AR D G Y C++ NSVG + E
Sbjct: 252 GSSRRQPVQLNERVRQVSGT-----LIIREARVEDSGKYLCIVNNSVGGESVE 299
Score = 31.1 bits (67), Expect = 0.006
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Frame = +2
Query: 179 PPIVRVEPKNITVIEGSKLLLKCEYESNPSSLSAVFWFRDGERVNVND---TAHYQGGTT 349
PP +R T+ G + LKC NP+ + W DG+R++ + Y
Sbjct: 393 PPQIRQAFAEETLQPGPSMFLKCVASGNPT--PEITWELDGKRLSNTERLQVGQYVTVNG 450
Query: 350 DQHS-LIIMNARGVDMGNYTCLLTNSVGN 433
D S L I + D G Y C+ + VG+
Sbjct: 451 DVVSHLNISSTHTNDGGLYKCIAASKVGS 479
Score = 30.7 bits (66), Expect = 0.008
Identities = 23/106 (21%), Positives = 44/106 (41%), Gaps = 8/106 (7%)
Frame = +2
Query: 164 LEIWYPPIVRVEPKNITVIEGSKLLLKCEYESNPSSLSAVFWFRDGERVNVNDTAHY--- 334
+ + PP ++ KN T G +L+CE + + W + +R++ + Y
Sbjct: 771 ISVQAPPHFEIKLKNQTARRGEPAVLQCEAQGEKP--IGILWNMNNKRLDPKSDSRYTIR 828
Query: 335 -----QGGTTDQHSLIIMNARGVDMGNYTCLLTNSVGNGTSEDNIV 457
G +D L I D +TC+ TN+ G+ + N++
Sbjct: 829 EEILANGVLSD---LSIKRTERSDSALFTCVATNAFGSDDTSINMI 871
Score = 23.8 bits (49), Expect = 0.90
Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +2
Query: 179 PPIVRVEPKNITVIEGSKLLLKCEYESNPSSLSAVFWFR-DGERV 310
P V+ P + G+ +++C+ NP + W R DG V
Sbjct: 3 PVFVKEPPNRVDFSNGTGAVVECQARGNPQ--PDIIWVRADGSAV 45
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 31.5 bits (68), Expect = 0.004
Identities = 21/97 (21%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Frame = +2
Query: 161 ELEIWYPPIVRVEPKNITVIEGSKLLLKCEYESNPSSLSAVFW-----FRDGERVNVNDT 325
+L++ PP VEP +++V + L C+ + P+ + W + GE + +
Sbjct: 703 KLQVKVPPRWIVEPTDVSVERNKHVALHCQAQGVPT--PTIVWKKATGSKSGEYEELRER 760
Query: 326 AHYQGGTTDQHSLIIMNARGVDMGNYTCLLTNSVGNG 436
A+ + +L++ + + G Y C +N +G+G
Sbjct: 761 AYTK--ILSNGTLLLQHVKEDREGFYLCQASNGIGSG 795
Score = 31.5 bits (68), Expect = 0.004
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 287 WFR-DGERVNVNDTAHYQGGTTDQHSLIIMNARGVDMGNYTCLLTNSVGN 433
W++ GE++ + T + Q L++ N + D G+YTC + N+ GN
Sbjct: 1345 WYKGQGEQIRTDSTRNIQ--ILPSGELMLSNLQSQDGGDYTCQVENAQGN 1392
Score = 21.0 bits (42), Expect = 6.3
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +2
Query: 401 YTCLLTNSVGNGTSED 448
Y C+ +NSVG S D
Sbjct: 106 YRCVASNSVGRVLSRD 121
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 31.5 bits (68), Expect = 0.004
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 287 WFR-DGERVNVNDTAHYQGGTTDQHSLIIMNARGVDMGNYTCLLTNSVGN 433
W++ GE++ + T + Q L++ N + D G+YTC + N+ GN
Sbjct: 1341 WYKGQGEQIRTDSTRNIQ--ILPSGELMLSNLQSQDGGDYTCQVENAQGN 1388
Score = 30.7 bits (66), Expect = 0.008
Identities = 19/88 (21%), Positives = 35/88 (39%)
Frame = +2
Query: 158 GELEIWYPPIVRVEPKNITVIEGSKLLLKCEYESNPSSLSAVFWFRDGERVNVNDTAHYQ 337
G++ + PP + + + G + L C LS + W +DG + ++ H
Sbjct: 603 GDVAVIVPPKISPFTADRDLHLGERTTLTCSVTRGDLPLS-ISWLKDGRAMGPSERVHVT 661
Query: 338 GGTTDQHSLIIMNARGVDMGNYTCLLTN 421
L+I + GNY+C+ N
Sbjct: 662 NMDQYNSILMIEHLSPDHNGNYSCVARN 689
Score = 29.9 bits (64), Expect = 0.014
Identities = 21/96 (21%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Frame = +2
Query: 164 LEIWYPPIVRVEPKNITVIEGSKLLLKCEYESNPSSLSAVFW-----FRDGERVNVNDTA 328
L + PP VEP +++V + L C+ + P+ + W + GE + + A
Sbjct: 700 LVVHVPPRWIVEPTDVSVERNKHVALHCQAQGVPT--PTIVWKKATGSKSGEYEELRERA 757
Query: 329 HYQGGTTDQHSLIIMNARGVDMGNYTCLLTNSVGNG 436
+ + +L++ + + G Y C +N +G+G
Sbjct: 758 YTK--ILSNGTLLLQHVKEDREGFYLCQASNGIGSG 791
Score = 21.0 bits (42), Expect = 6.3
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +2
Query: 401 YTCLLTNSVGNGTSED 448
Y C+ +NSVG S D
Sbjct: 106 YRCVASNSVGRVLSRD 121
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 24.2 bits (50), Expect = 0.68
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 120 HHRDKGSSHARHQEN*KFG 176
HH+D S HA +QE +FG
Sbjct: 106 HHQDSSSEHASNQE--RFG 122
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 23.4 bits (48), Expect = 1.2
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1
Query: 337 RGHHGSALAHHH 372
RGH G + +HHH
Sbjct: 395 RGHSGQSSSHHH 406
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 22.6 bits (46), Expect = 2.1
Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +1
Query: 37 FKTISNLTIEATRFENGQKFHC-EAANEVTIE 129
F + +E R ENG++F C +E+T++
Sbjct: 157 FNANARSVVEKMRKENGKEFDCHNYMSELTVD 188
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.4 bits (43), Expect = 4.8
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +3
Query: 3 TSAANRND*YDFQNDFQSNDRSN 71
T N+N D ND++ ND N
Sbjct: 101 TGFNNKNKDGDDNNDYEDNDYGN 123
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 20.6 bits (41), Expect = 8.4
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -2
Query: 159 PGGVHGMILCLDGDL 115
PG + G++ LDG L
Sbjct: 53 PGAITGLVASLDGAL 67
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 20.6 bits (41), Expect = 8.4
Identities = 10/40 (25%), Positives = 19/40 (47%)
Frame = +2
Query: 185 IVRVEPKNITVIEGSKLLLKCEYESNPSSLSAVFWFRDGE 304
I ++ N +V G +++L CE + F +DG+
Sbjct: 225 ICKLSHSNASVAGGMEMILLCEKVAKEDIQVRFFEEKDGQ 264
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 20.6 bits (41), Expect = 8.4
Identities = 10/40 (25%), Positives = 19/40 (47%)
Frame = +2
Query: 185 IVRVEPKNITVIEGSKLLLKCEYESNPSSLSAVFWFRDGE 304
I ++ N +V G +++L CE + F +DG+
Sbjct: 225 ICKLSHSNASVAGGMEMILLCEKVAKEDIQVRFFEEKDGQ 264
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,593
Number of Sequences: 438
Number of extensions: 3209
Number of successful extensions: 21
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12066642
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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